RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 FBXO3Q9UK99 471 aa14.84□□□□□ -0.03
SPARC-206ENST00000524277 ECM29Q5VYK3 1845 aa14.84□□□□□ -0.03
SPARC-206ENST00000524277 MAST3O60307 1309 aa14.84□□□□□ -0.03
SPARC-206ENST00000524277 PUM3Q15397 648 aaKnown RBP14.83□□□□□ -0.04
SPARC-206ENST00000524277 LRRC24Q50LG9 513 aa14.83□□□□□ -0.04
SPARC-206ENST00000524277 VGLL2Q8N8G2 317 aa14.83□□□□□ -0.04
SPARC-206ENST00000524277 HOOK2Q96ED9 719 aa14.83□□□□□ -0.04
SPARC-206ENST00000524277 TDRD3Q9H7E2 651 aaKnown RBP14.83□□□□□ -0.04
SPARC-206ENST00000524277 HPS5Q9UPZ3 1129 aa14.83□□□□□ -0.04
SPARC-206ENST00000524277 FKBP1CQ5VVH2 108 aa14.82□□□□□ -0.04
SPARC-206ENST00000524277 TEKT1Q969V4 418 aa14.82□□□□□ -0.04
SPARC-206ENST00000524277 CLMNQ96JQ2 1002 aa14.82□□□□□ -0.04
SPARC-206ENST00000524277 TMOD2Q9NZR1 351 aa14.82□□□□□ -0.04
SPARC-206ENST00000524277 SSC5DA1L4H1 1573 aa14.81□□□□□ -0.04
SPARC-206ENST00000524277 TESPA1A2RU30 521 aaPredicted RBP14.81□□□□□ -0.04
SPARC-206ENST00000524277 EYA2O00167 538 aa14.81□□□□□ -0.04
SPARC-206ENST00000524277 SLC5A1P13866 664 aa14.81□□□□□ -0.04
SPARC-206ENST00000524277 TRMT2AQ8IZ69 625 aaKnown RBP14.81□□□□□ -0.04
SPARC-206ENST00000524277 WDR66Q8TBY9 1149 aa14.81□□□□□ -0.04
SPARC-206ENST00000524277 LPIN2Q92539 896 aa14.81□□□□□ -0.04
SPARC-206ENST00000524277 SMC4Q9NTJ3 1288 aa14.81□□□□□ -0.04
SPARC-206ENST00000524277 FZD1Q9UP38 647 aa14.81□□□□□ -0.04
SPARC-206ENST00000524277 FGFR2P21802 821 aa14.8□□□□□ -0.04
SPARC-206ENST00000524277 BCAMP50895 628 aa14.8□□□□□ -0.04
SPARC-206ENST00000524277 MAP3K9P80192 1104 aa14.8□□□□□ -0.04
SPARC-206ENST00000524277 CHAF1AQ13111 956 aaPredicted RBP14.8□□□□□ -0.04
SPARC-206ENST00000524277 HHIPL2Q6UWX4 724 aa14.8□□□□□ -0.04
SPARC-206ENST00000524277 FAM83AQ86UY5 434 aa14.8□□□□□ -0.04
SPARC-206ENST00000524277 ZDHHC15Q96MV8 337 aa14.8□□□□□ -0.04
SPARC-206ENST00000524277 TEPSINQ96N21 525 aa14.8□□□□□ -0.04
SPARC-206ENST00000524277 TCP10L2B9ZVM9 353 aa14.79□□□□□ -0.04
SPARC-206ENST00000524277 UBTFL1P0CB47 393 aaPredicted RBP14.79□□□□□ -0.04
SPARC-206ENST00000524277 RFX5P48382 616 aaPredicted RBP14.79□□□□□ -0.04
SPARC-206ENST00000524277 GTF2A2P52657 109 aa14.79□□□□□ -0.04
SPARC-206ENST00000524277 SOX10P56693 466 aa14.79□□□□□ -0.04
SPARC-206ENST00000524277 AOX1Q06278 1338 aa14.79□□□□□ -0.04
SPARC-206ENST00000524277 ARHGEF6Q15052 776 aa14.79□□□□□ -0.04
SPARC-206ENST00000524277 ERO1AQ96HE7 468 aa14.79□□□□□ -0.04
SPARC-206ENST00000524277 API5Q9BZZ5 524 aaKnown RBP14.79□□□□□ -0.04
SPARC-206ENST00000524277 GNL3LQ9NVN8 582 aaKnown RBP14.79□□□□□ -0.04
SPARC-206ENST00000524277 IQSEC3Q9UPP2 1182 aaPredicted RBP14.79□□□□□ -0.04
SPARC-206ENST00000524277 CSADQ9Y600 493 aa14.79□□□□□ -0.04
SPARC-206ENST00000524277 IGF2BP3O00425 579 aaKnown RBP eCLIP14.78□□□□□ -0.04
SPARC-206ENST00000524277 ZBTB22O15209 634 aa14.78□□□□□ -0.04
SPARC-206ENST00000524277 WDHD1O75717 1129 aaPredicted RBP14.78□□□□□ -0.04
SPARC-206ENST00000524277 CIAO1O76071 339 aa14.78□□□□□ -0.04
SPARC-206ENST00000524277 INTS3Q68E01 1043 aaKnown RBP14.78□□□□□ -0.04
SPARC-206ENST00000524277 KLHDC4Q8TBB5 520 aa14.78□□□□□ -0.04
SPARC-206ENST00000524277 OPTNQ96CV9 577 aa14.78□□□□□ -0.04
SPARC-206ENST00000524277 TMEM39BQ9GZU3 492 aa14.78□□□□□ -0.04
SPARC-206ENST00000524277 R3HDMLQ9H3Y0 253 aa14.78□□□□□ -0.04
SPARC-206ENST00000524277 CEP126Q9P2H0 1117 aa14.78□□□□□ -0.04
SPARC-206ENST00000524277 PDE4DIPQ5VU43 2346 aa14.77□□□□□ -0.04
SPARC-206ENST00000524277 CCER2I3L3R5 266 aa14.77□□□□□ -0.05
SPARC-206ENST00000524277 DCAF15Q66K64 600 aa14.77□□□□□ -0.05
SPARC-206ENST00000524277 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.77□□□□□ -0.05
SPARC-206ENST00000524277 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.77□□□□□ -0.05
SPARC-206ENST00000524277 ELP3Q9H9T3 547 aa14.77□□□□□ -0.05
SPARC-206ENST00000524277 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.77□□□□□ -0.05
SPARC-206ENST00000524277 ARAP2Q8WZ64 1704 aa14.76□□□□□ -0.05
SPARC-206ENST00000524277 SEMA3EO15041 775 aa14.76□□□□□ -0.05
SPARC-206ENST00000524277 GJA5P36382 358 aa14.76□□□□□ -0.05
SPARC-206ENST00000524277 IL15P40933 162 aaPredicted RBP14.76□□□□□ -0.05
SPARC-206ENST00000524277 APOBEC3HQ6NTF7 200 aaKnown RBP14.76□□□□□ -0.05
SPARC-206ENST00000524277 ARHGAP45Q92619 1136 aa14.76□□□□□ -0.05
SPARC-206ENST00000524277 CDCA7LQ96GN5 454 aa14.76□□□□□ -0.05
SPARC-206ENST00000524277 MS4A4AQ96JQ5 239 aa14.76□□□□□ -0.05
SPARC-206ENST00000524277 ZCCHC17Q9NP64 241 aaKnown RBP14.76□□□□□ -0.05
SPARC-206ENST00000524277 TRIM17Q9Y577 477 aa14.76□□□□□ -0.05
SPARC-206ENST00000524277 RPAP1Q9BWH6 1393 aaPredicted RBP14.75□□□□□ -0.05
SPARC-206ENST00000524277 SP3Q02447 781 aa14.75□□□□□ -0.05
SPARC-206ENST00000524277 CRHR2Q13324 411 aa14.75□□□□□ -0.05
SPARC-206ENST00000524277 VGLL4Q14135 290 aa14.75□□□□□ -0.05
SPARC-206ENST00000524277 GRIK5Q16478 980 aa14.75□□□□□ -0.05
SPARC-206ENST00000524277 OTOP1Q7RTM1 612 aa14.75□□□□□ -0.05
SPARC-206ENST00000524277 ATG9AQ7Z3C6 839 aa14.75□□□□□ -0.05
SPARC-206ENST00000524277 ERO1BQ86YB8 467 aa14.75□□□□□ -0.05
SPARC-206ENST00000524277 PTPN18Q99952 460 aa14.75□□□□□ -0.05
SPARC-206ENST00000524277 ZFYVE28Q9HCC9 887 aa14.75□□□□□ -0.05
SPARC-206ENST00000524277 DENND2AQ9ULE3 1009 aa14.75□□□□□ -0.05
SPARC-206ENST00000524277 NOB1Q9ULX3 412 aaKnown RBP14.75□□□□□ -0.05
SPARC-206ENST00000524277 LAMB1P07942 1786 aa14.75□□□□□ -0.05
SPARC-206ENST00000524277 SPDYE5A6NIY4 337 aa14.74□□□□□ -0.05
SPARC-206ENST00000524277 CETPP11597 493 aa14.74□□□□□ -0.05
SPARC-206ENST00000524277 ATP2B3Q16720 1220 aa14.74□□□□□ -0.05
SPARC-206ENST00000524277 ZGPATQ8N5A5 531 aaKnown RBP14.74□□□□□ -0.05
SPARC-206ENST00000524277 EFCC1Q9HA90 598 aa14.74□□□□□ -0.05
SPARC-206ENST00000524277 SALL1Q9NSC2 1324 aa14.73□□□□□ -0.05
SPARC-206ENST00000524277 CCL15-CCL14A0A0B4J2E2 113 aa14.73□□□□□ -0.05
SPARC-206ENST00000524277 GNAI3P08754 354 aa14.73□□□□□ -0.05
SPARC-206ENST00000524277 CCL15Q16663 113 aa14.73□□□□□ -0.05
SPARC-206ENST00000524277 FAM151AQ8WW52 585 aa14.73□□□□□ -0.05
SPARC-206ENST00000524277 BRI3BPQ8WY22 251 aa14.73□□□□□ -0.05
SPARC-206ENST00000524277 ZNF341Q9BYN7 854 aa14.73□□□□□ -0.05
SPARC-206ENST00000524277 COPRSQ9NQ92 184 aa14.73□□□□□ -0.05
SPARC-206ENST00000524277 PTPN22Q9Y2R2 807 aa14.73□□□□□ -0.05
SPARC-206ENST00000524277 IPO8O15397 1037 aaKnown RBP14.72□□□□□ -0.05
SPARC-206ENST00000524277 SLC34A2O95436 690 aa14.72□□□□□ -0.05
SPARC-206ENST00000524277 LDHBP07195 334 aaKnown RBP14.72□□□□□ -0.05
SPARC-206ENST00000524277 SNAPC2Q13487 334 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms