RNA–Protein interactions for RNA: ENST00000524094.1

LINC01339-204, Transcript of long intergenic non-protein coding RNA 1339, humanhuman

TSL 3

Gene LINC01339, Length 269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01339-204ENST00000524094 ZCCHC6Q5VYS8 1495 aaKnown RBP4.3□□□□□ -1.72
LINC01339-204ENST00000524094 TM4SF5O14894 197 aa4.29□□□□□ -1.72
LINC01339-204ENST00000524094 GREM1O60565 184 aa4.29□□□□□ -1.72
LINC01339-204ENST00000524094 EPB42P16452 691 aa4.29□□□□□ -1.72
LINC01339-204ENST00000524094 FSTP19883 344 aa4.29□□□□□ -1.72
LINC01339-204ENST00000524094 ITPKAP23677 461 aa4.29□□□□□ -1.72
LINC01339-204ENST00000524094 KRTAP19-4Q3LI73 84 aa4.29□□□□□ -1.72
LINC01339-204ENST00000524094 FIGNL1Q6PIW4 674 aa4.29□□□□□ -1.72
LINC01339-204ENST00000524094 POP1Q99575 1024 aaKnown RBP4.29□□□□□ -1.72
LINC01339-204ENST00000524094 OSMRQ99650 979 aa4.29□□□□□ -1.72
LINC01339-204ENST00000524094 KBTBD4Q9NVX7 518 aa4.29□□□□□ -1.72
LINC01339-204ENST00000524094 GJA3Q9Y6H8 435 aa4.29□□□□□ -1.72
LINC01339-204ENST00000524094 CADPSQ9ULU8 1353 aa4.28□□□□□ -1.72
LINC01339-204ENST00000524094 LOC102724428A0A0B4J2F2 783 aa4.28□□□□□ -1.72
LINC01339-204ENST00000524094 ENC1O14682 589 aa4.28□□□□□ -1.72
LINC01339-204ENST00000524094 GADD45BO75293 160 aaPredicted RBP4.28□□□□□ -1.72
LINC01339-204ENST00000524094 RARAP10276 462 aa4.28□□□□□ -1.72
LINC01339-204ENST00000524094 NRLP54845 237 aa4.28□□□□□ -1.72
LINC01339-204ENST00000524094 FCGRTP55899 365 aa4.28□□□□□ -1.72
LINC01339-204ENST00000524094 SIK1P57059 783 aa4.28□□□□□ -1.72
LINC01339-204ENST00000524094 PRR23CQ6ZRP0 262 aa4.28□□□□□ -1.72
LINC01339-204ENST00000524094 DHX32Q7L7V1 743 aaKnown RBP4.28□□□□□ -1.72
LINC01339-204ENST00000524094 USP48Q86UV5 1035 aa4.28□□□□□ -1.72
LINC01339-204ENST00000524094 MCF2L2Q86YR7 1114 aa4.28□□□□□ -1.72
LINC01339-204ENST00000524094 RASGRP4Q8TDF6 673 aa4.28□□□□□ -1.72
LINC01339-204ENST00000524094 EAF1Q96JC9 268 aaPredicted RBP4.28□□□□□ -1.72
LINC01339-204ENST00000524094 NOC4LQ9BVI4 516 aaKnown RBP4.28□□□□□ -1.72
LINC01339-204ENST00000524094 BHLHE41Q9C0J9 482 aaPredicted RBP4.28□□□□□ -1.72
LINC01339-204ENST00000524094 EFCC1Q9HA90 598 aa4.28□□□□□ -1.72
LINC01339-204ENST00000524094 GGT7Q9UJ14 662 aa4.28□□□□□ -1.72
LINC01339-204ENST00000524094 F6X3S4 739 aa4.27□□□□□ -1.73
LINC01339-204ENST00000524094 PAGE1O75459 146 aa4.27□□□□□ -1.73
LINC01339-204ENST00000524094 FGRP09769 529 aa4.27□□□□□ -1.73
LINC01339-204ENST00000524094 EDN3P14138 238 aa4.27□□□□□ -1.73
LINC01339-204ENST00000524094 ATF4P18848 351 aaPredicted RBP4.27□□□□□ -1.73
LINC01339-204ENST00000524094 BMP6P22004 513 aa4.27□□□□□ -1.73
LINC01339-204ENST00000524094 ATP11AP98196 1134 aa4.27□□□□□ -1.73
LINC01339-204ENST00000524094 PAK2Q13177 524 aa4.27□□□□□ -1.73
LINC01339-204ENST00000524094 ZNF423Q2M1K9 1284 aa4.27□□□□□ -1.73
LINC01339-204ENST00000524094 FBXL19Q6PCT2 694 aa4.27□□□□□ -1.73
LINC01339-204ENST00000524094 SHISA2Q6UWI4 295 aa4.27□□□□□ -1.73
LINC01339-204ENST00000524094 HFE2Q6ZVN8 426 aa4.27□□□□□ -1.73
LINC01339-204ENST00000524094 VN1R5Q7Z5H4 357 aa4.27□□□□□ -1.73
LINC01339-204ENST00000524094 ZNF654Q8IZM8 581 aa4.27□□□□□ -1.73
LINC01339-204ENST00000524094 TMEM102Q8N9M5 508 aaPredicted RBP4.27□□□□□ -1.73
LINC01339-204ENST00000524094 PHC3Q8NDX5 983 aa4.27□□□□□ -1.73
LINC01339-204ENST00000524094 TTC16Q8NEE8 873 aa4.27□□□□□ -1.73
LINC01339-204ENST00000524094 STK35Q8TDR2 534 aa4.27□□□□□ -1.73
LINC01339-204ENST00000524094 DHX38Q92620 1227 aaKnown RBP4.27□□□□□ -1.73
LINC01339-204ENST00000524094 BHMTQ93088 406 aa4.27□□□□□ -1.73
LINC01339-204ENST00000524094 RHOVQ96L33 236 aa4.27□□□□□ -1.73
LINC01339-204ENST00000524094 NECAB3Q96P71 396 aaPredicted RBP4.27□□□□□ -1.73
LINC01339-204ENST00000524094 MUC3BQ9H195 1237 aa4.27□□□□□ -1.73
LINC01339-204ENST00000524094 EHD4Q9H223 541 aa4.27□□□□□ -1.73
LINC01339-204ENST00000524094 RASSF4Q9H2L5 321 aa4.27□□□□□ -1.73
LINC01339-204ENST00000524094 LIN7BQ9HAP6 207 aa4.27□□□□□ -1.73
LINC01339-204ENST00000524094 CAPN10Q9HC96 672 aa4.27□□□□□ -1.73
LINC01339-204ENST00000524094 AVENQ9NQS1 362 aaPredicted RBP4.27□□□□□ -1.73
LINC01339-204ENST00000524094 SEC31BQ9NQW1 1179 aa4.27□□□□□ -1.73
LINC01339-204ENST00000524094 PRKAG2Q9UGJ0 569 aa4.27□□□□□ -1.73
LINC01339-204ENST00000524094 NAGPAQ9UK23 515 aa4.27□□□□□ -1.73
LINC01339-204ENST00000524094 A0A096LPE4 126 aa4.26□□□□□ -1.73
LINC01339-204ENST00000524094 A0A1W2PPZ6 126 aa4.26□□□□□ -1.73
LINC01339-204ENST00000524094 FBXO24O75426 580 aa4.26□□□□□ -1.73
LINC01339-204ENST00000524094 WNT11O96014 354 aa4.26□□□□□ -1.73
LINC01339-204ENST00000524094 CELA3AP09093 270 aa4.26□□□□□ -1.73
LINC01339-204ENST00000524094 TFE3P19532 575 aaPredicted RBP4.26□□□□□ -1.73
LINC01339-204ENST00000524094 SPINK2P20155 84 aa4.26□□□□□ -1.73
LINC01339-204ENST00000524094 GSTT1P30711 240 aa4.26□□□□□ -1.73
LINC01339-204ENST00000524094 GPLD1P80108 840 aa4.26□□□□□ -1.73
LINC01339-204ENST00000524094 MLLT1Q03111 559 aaPredicted RBP4.26□□□□□ -1.73
LINC01339-204ENST00000524094 HYAL2Q12891 473 aa4.26□□□□□ -1.73
LINC01339-204ENST00000524094 GRIK5Q16478 980 aa4.26□□□□□ -1.73
LINC01339-204ENST00000524094 HS2ST1Q7LGA3 356 aa4.26□□□□□ -1.73
LINC01339-204ENST00000524094 NSUN5Q96P11 429 aaKnown RBP4.26□□□□□ -1.73
LINC01339-204ENST00000524094 PBX4Q9BYU1 374 aa4.26□□□□□ -1.73
LINC01339-204ENST00000524094 TLR6Q9Y2C9 796 aa4.26□□□□□ -1.73
LINC01339-204ENST00000524094 STARD13Q9Y3M8 1113 aa4.26□□□□□ -1.73
LINC01339-204ENST00000524094 NACADO15069 1562 aa4.25□□□□□ -1.73
LINC01339-204ENST00000524094 SIN3BO75182 1162 aa4.25□□□□□ -1.73
LINC01339-204ENST00000524094 TGFB1P01137 390 aa4.25□□□□□ -1.73
LINC01339-204ENST00000524094 CRKP46108 304 aa4.25□□□□□ -1.73
LINC01339-204ENST00000524094 PERM1Q5SV97 790 aa4.25□□□□□ -1.73
LINC01339-204ENST00000524094 ZNF468Q5VIY5 522 aaPredicted RBP4.25□□□□□ -1.73
LINC01339-204ENST00000524094 HGSNATQ68CP4 663 aa4.25□□□□□ -1.73
LINC01339-204ENST00000524094 C20orf204Q6ZNR8 217 aa4.25□□□□□ -1.73
LINC01339-204ENST00000524094 SV2BQ7L1I2 683 aa4.25□□□□□ -1.73
LINC01339-204ENST00000524094 SYT9Q86SS6 491 aa4.25□□□□□ -1.73
LINC01339-204ENST00000524094 TNFRSF25Q93038 417 aa4.25□□□□□ -1.73
LINC01339-204ENST00000524094 TMEM74Q96NL1 305 aa4.25□□□□□ -1.73
LINC01339-204ENST00000524094 ADAM19Q9H013 955 aa4.25□□□□□ -1.73
LINC01339-204ENST00000524094 ZNF576Q9H609 170 aa4.25□□□□□ -1.73
LINC01339-204ENST00000524094 DNAJB12Q9NXW2 375 aaKnown RBP4.25□□□□□ -1.73
LINC01339-204ENST00000524094 CACNA2D2Q9NY47 1150 aa4.25□□□□□ -1.73
LINC01339-204ENST00000524094 USP21Q9UK80 565 aa4.25□□□□□ -1.73
LINC01339-204ENST00000524094 ADARB2-AS1A8MUL3 147 aa4.24□□□□□ -1.73
LINC01339-204ENST00000524094 MINDY4BA8MYZ0 360 aa4.24□□□□□ -1.73
LINC01339-204ENST00000524094 M0R082 166 aa4.24□□□□□ -1.73
LINC01339-204ENST00000524094 PDE2AO00408 941 aaPredicted RBP4.24□□□□□ -1.73
LINC01339-204ENST00000524094 PSAPP07602 524 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms