RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 GJA5P36382 358 aa23.56■■□□□ 1.36
PTP4A3-206ENST00000524028 NOM1Q5C9Z4 860 aaKnown RBP23.56■■□□□ 1.36
PTP4A3-206ENST00000524028 MANSC4A6NHS7 340 aaPredicted RBP23.55■■□□□ 1.36
PTP4A3-206ENST00000524028 TCP10L2B9ZVM9 353 aa23.55■■□□□ 1.36
PTP4A3-206ENST00000524028 EYA2O00167 538 aa23.55■■□□□ 1.36
PTP4A3-206ENST00000524028 FRAT2O75474 233 aaPredicted RBP23.55■■□□□ 1.36
PTP4A3-206ENST00000524028 IREB2P48200 963 aaKnown RBP23.55■■□□□ 1.36
PTP4A3-206ENST00000524028 TNFAIP1Q13829 316 aa23.55■■□□□ 1.36
PTP4A3-206ENST00000524028 PUM3Q15397 648 aaKnown RBP23.55■■□□□ 1.36
PTP4A3-206ENST00000524028 IFNL1Q8IU54 200 aa23.55■■□□□ 1.36
PTP4A3-206ENST00000524028 NOB1Q9ULX3 412 aaKnown RBP23.55■■□□□ 1.36
PTP4A3-206ENST00000524028 SOX10P56693 466 aa23.54■■□□□ 1.36
PTP4A3-206ENST00000524028 INHBEP58166 350 aa23.54■■□□□ 1.36
PTP4A3-206ENST00000524028 ATG9AQ7Z3C6 839 aa23.54■■□□□ 1.36
PTP4A3-206ENST00000524028 TBC1D22AQ8WUA7 517 aa23.54■■□□□ 1.36
PTP4A3-206ENST00000524028 TMEM39BQ9GZU3 492 aa23.54■■□□□ 1.36
PTP4A3-206ENST00000524028 HPS5Q9UPZ3 1129 aa23.54■■□□□ 1.36
PTP4A3-206ENST00000524028 ARAP2Q8WZ64 1704 aa23.53■■□□□ 1.36
PTP4A3-206ENST00000524028 IGF2BP3O00425 579 aaKnown RBP eCLIP23.53■■□□□ 1.36
PTP4A3-206ENST00000524028 HDLBPQ00341 1268 aaKnown RBP23.53■■□□□ 1.36
PTP4A3-206ENST00000524028 ANKRD13AQ8IZ07 590 aa23.53■■□□□ 1.36
PTP4A3-206ENST00000524028 KIF16BQ96L93 1317 aa23.53■■□□□ 1.36
PTP4A3-206ENST00000524028 ALDH1A1P00352 501 aa23.52■■□□□ 1.36
PTP4A3-206ENST00000524028 IFIT1P09914 478 aaKnown RBP23.52■■□□□ 1.36
PTP4A3-206ENST00000524028 PKN2Q16513 984 aaKnown RBP23.52■■□□□ 1.36
PTP4A3-206ENST00000524028 FKTNO75072 461 aa23.51■■□□□ 1.35
PTP4A3-206ENST00000524028 CT47B1P0C2W7 299 aaPredicted RBP23.51■■□□□ 1.35
PTP4A3-206ENST00000524028 CACNB3P54284 484 aa23.51■■□□□ 1.35
PTP4A3-206ENST00000524028 TEKT1Q969V4 418 aa23.51■■□□□ 1.35
PTP4A3-206ENST00000524028 ELP3Q9H9T3 547 aa23.51■■□□□ 1.35
PTP4A3-206ENST00000524028 UBTFL1P0CB47 393 aaPredicted RBP23.5■■□□□ 1.35
PTP4A3-206ENST00000524028 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.5■■□□□ 1.35
PTP4A3-206ENST00000524028 LPIN2Q92539 896 aa23.5■■□□□ 1.35
PTP4A3-206ENST00000524028 MRIQ9BWK5 157 aa23.5■■□□□ 1.35
PTP4A3-206ENST00000524028 TNNI2P48788 182 aa23.49■■□□□ 1.35
PTP4A3-206ENST00000524028 APOBEC3HQ6NTF7 200 aaKnown RBP23.49■■□□□ 1.35
PTP4A3-206ENST00000524028 ZDHHC15Q96MV8 337 aa23.49■■□□□ 1.35
PTP4A3-206ENST00000524028 PTPN18Q99952 460 aa23.49■■□□□ 1.35
PTP4A3-206ENST00000524028 SIL1Q9H173 461 aa23.49■■□□□ 1.35
PTP4A3-206ENST00000524028 CCER2I3L3R5 266 aa23.48■■□□□ 1.35
PTP4A3-206ENST00000524028 SLC5A1P13866 664 aa23.48■■□□□ 1.35
PTP4A3-206ENST00000524028 CNKSR2Q8WXI2 1034 aa23.48■■□□□ 1.35
PTP4A3-206ENST00000524028 OPTNQ96CV9 577 aa23.48■■□□□ 1.35
PTP4A3-206ENST00000524028 SUGT1Q9Y2Z0 365 aa23.48■■□□□ 1.35
PTP4A3-206ENST00000524028 TESPA1A2RU30 521 aaPredicted RBP23.47■■□□□ 1.35
PTP4A3-206ENST00000524028 API5Q9BZZ5 524 aaKnown RBP23.47■■□□□ 1.35
PTP4A3-206ENST00000524028 LRRFIP2Q9Y608 721 aaKnown RBP23.47■■□□□ 1.35
PTP4A3-206ENST00000524028 CIAO1O76071 339 aa23.46■■□□□ 1.35
PTP4A3-206ENST00000524028 RARSP54136 660 aaKnown RBP23.46■■□□□ 1.35
PTP4A3-206ENST00000524028 VGLL4Q14135 290 aa23.46■■□□□ 1.35
PTP4A3-206ENST00000524028 FBXO46Q6PJ61 603 aaPredicted RBP23.46■■□□□ 1.35
PTP4A3-206ENST00000524028 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.46■■□□□ 1.353e-8■■■□□ 14.8
PTP4A3-206ENST00000524028 MS4A4AQ96JQ5 239 aa23.46■■□□□ 1.35
PTP4A3-206ENST00000524028 MAP3K9P80192 1104 aa23.45■■□□□ 1.34
PTP4A3-206ENST00000524028 CRHR2Q13324 411 aa23.45■■□□□ 1.34
PTP4A3-206ENST00000524028 HHIPL2Q6UWX4 724 aa23.45■■□□□ 1.34
PTP4A3-206ENST00000524028 MEIS3Q99687 375 aa23.45■■□□□ 1.34
PTP4A3-206ENST00000524028 FBXO3Q9UK99 471 aa23.45■■□□□ 1.34
PTP4A3-206ENST00000524028 PA2G4Q9UQ80 394 aaKnown RBP23.45■■□□□ 1.34
PTP4A3-206ENST00000524028 OTOFQ9HC10 1997 aa23.45■■□□□ 1.34
PTP4A3-206ENST00000524028 LAMB1P07942 1786 aa23.45■■□□□ 1.34
PTP4A3-206ENST00000524028 MAST3O60307 1309 aa23.44■■□□□ 1.34
PTP4A3-206ENST00000524028 ATP2B3Q16720 1220 aa23.44■■□□□ 1.34
PTP4A3-206ENST00000524028 WDR66Q8TBY9 1149 aa23.44■■□□□ 1.34
PTP4A3-206ENST00000524028 CEP126Q9P2H0 1117 aa23.44■■□□□ 1.34
PTP4A3-206ENST00000524028 OTUD7BQ6GQQ9 843 aa23.43■■□□□ 1.34
PTP4A3-206ENST00000524028 FAM83AQ86UY5 434 aa23.43■■□□□ 1.34
PTP4A3-206ENST00000524028 TNRC18O15417 2968 aaPredicted RBP23.43■■□□□ 1.34
PTP4A3-206ENST00000524028 FKBP1CQ5VVH2 108 aa23.42■■□□□ 1.34
PTP4A3-206ENST00000524028 BRI3BPQ8WY22 251 aa23.42■■□□□ 1.34
PTP4A3-206ENST00000524028 TMOD2Q9NZR1 351 aa23.42■■□□□ 1.34
PTP4A3-206ENST00000524028 PRDX5P30044 214 aa23.41■■□□□ 1.34
PTP4A3-206ENST00000524028 IL15P40933 162 aaPredicted RBP23.41■■□□□ 1.34
PTP4A3-206ENST00000524028 DIXDC1Q155Q3 683 aa23.41■■□□□ 1.34
PTP4A3-206ENST00000524028 INTS3Q68E01 1043 aaKnown RBP23.41■■□□□ 1.34
PTP4A3-206ENST00000524028 OTOP1Q7RTM1 612 aa23.41■■□□□ 1.34
PTP4A3-206ENST00000524028 TRIM17Q9Y577 477 aa23.41■■□□□ 1.34
PTP4A3-206ENST00000524028 CSADQ9Y600 493 aa23.41■■□□□ 1.34
PTP4A3-206ENST00000524028 SNCAIPQ9Y6H5 919 aa23.41■■□□□ 1.34
PTP4A3-206ENST00000524028 PHKA1P46020 1223 aa23.4■■□□□ 1.34
PTP4A3-206ENST00000524028 CAP1Q01518 475 aa23.4■■□□□ 1.34
PTP4A3-206ENST00000524028 ARHGAP45Q92619 1136 aa23.4■■□□□ 1.34
PTP4A3-206ENST00000524028 OTUD5Q96G74 571 aa23.4■■□□□ 1.34
PTP4A3-206ENST00000524028 COPRSQ9NQ92 184 aa23.4■■□□□ 1.34
PTP4A3-206ENST00000524028 DAGLAQ9Y4D2 1042 aa23.4■■□□□ 1.34
PTP4A3-206ENST00000524028 ADORA1P30542 326 aa23.39■■□□□ 1.33
PTP4A3-206ENST00000524028 GTF2A2P52657 109 aa23.39■■□□□ 1.33
PTP4A3-206ENST00000524028 CDC42EP5Q6NZY7 148 aa23.39■■□□□ 1.33
PTP4A3-206ENST00000524028 CD99L2Q8TCZ2 262 aa23.39■■□□□ 1.33
PTP4A3-206ENST00000524028 ZKSCAN4Q969J2 545 aaPredicted RBP23.39■■□□□ 1.33
PTP4A3-206ENST00000524028 WRNIP1Q96S55 665 aa23.39■■□□□ 1.33
PTP4A3-206ENST00000524028 HDAC5Q9UQL6 1122 aa23.39■■□□□ 1.33
PTP4A3-206ENST00000524028 CCL15-CCL14A0A0B4J2E2 113 aa23.38■■□□□ 1.33
PTP4A3-206ENST00000524028 SPDYE5A6NIY4 337 aa23.38■■□□□ 1.33
PTP4A3-206ENST00000524028 CCL15Q16663 113 aa23.38■■□□□ 1.33
PTP4A3-206ENST00000524028 FAM43AQ8N2R8 423 aa23.38■■□□□ 1.33
PTP4A3-206ENST00000524028 NFIAQ12857 509 aa23.37■■□□□ 1.33
PTP4A3-206ENST00000524028 MIGA2Q7L4E1 593 aa23.37■■□□□ 1.33
PTP4A3-206ENST00000524028 ERO1AQ96HE7 468 aa23.37■■□□□ 1.33
PTP4A3-206ENST00000524028 GNL3LQ9NVN8 582 aaKnown RBP23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms