RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 C9orf131Q5VYM1 1079 aa7.53□□□□□ -1.2
SDC2-208ENST00000523877 PDXDC2PQ6P474 469 aa7.53□□□□□ -1.2
SDC2-208ENST00000523877 FAM114A1Q8IWE2 563 aa7.53□□□□□ -1.2
SDC2-208ENST00000523877 TEX9Q8N6V9 391 aa7.53□□□□□ -1.2
SDC2-208ENST00000523877 ARL10Q8N8L6 244 aa7.53□□□□□ -1.2
SDC2-208ENST00000523877 TEKT4Q8WW24 435 aa7.53□□□□□ -1.2
SDC2-208ENST00000523877 GLMNQ92990 594 aa7.53□□□□□ -1.2
SDC2-208ENST00000523877 UROC1Q96N76 676 aa7.53□□□□□ -1.2
SDC2-208ENST00000523877 FAM167BQ9BTA0 163 aa7.53□□□□□ -1.2
SDC2-208ENST00000523877 YIPF2Q9BWQ6 316 aa7.53□□□□□ -1.2
SDC2-208ENST00000523877 OGFRQ9NZT2 677 aa7.53□□□□□ -1.2
SDC2-208ENST00000523877 TBC1D7Q9P0N9 293 aa7.53□□□□□ -1.2
SDC2-208ENST00000523877 LUC7L2Q9Y383 392 aaKnown RBP7.53□□□□□ -1.2
SDC2-208ENST00000523877 EID1Q9Y6B2 187 aa7.53□□□□□ -1.2
SDC2-208ENST00000523877 SLC30A1Q9Y6M5 507 aa7.53□□□□□ -1.2
SDC2-208ENST00000523877 SQORQ9Y6N5 450 aa7.53□□□□□ -1.2
SDC2-208ENST00000523877 CEP164Q9UPV0 1460 aa7.53□□□□□ -1.2
SDC2-208ENST00000523877 RNF123Q5XPI4 1314 aa7.52□□□□□ -1.2
SDC2-208ENST00000523877 EEA1Q15075 1411 aa7.52□□□□□ -1.2
SDC2-208ENST00000523877 SMARCA4P51532 1647 aa7.52□□□□□ -1.2
SDC2-208ENST00000523877 TBCAO75347 108 aaKnown RBP7.52□□□□□ -1.21
SDC2-208ENST00000523877 SNUPNO95149 360 aaKnown RBP7.52□□□□□ -1.21
SDC2-208ENST00000523877 FMNL1O95466 1100 aaPredicted RBP7.52□□□□□ -1.21
SDC2-208ENST00000523877 TPM1P09493 284 aa7.52□□□□□ -1.21
SDC2-208ENST00000523877 TPP2P29144 1249 aaPredicted RBP7.52□□□□□ -1.21
SDC2-208ENST00000523877 CDC27P30260 824 aa7.52□□□□□ -1.21
SDC2-208ENST00000523877 MNAT1P51948 309 aa7.52□□□□□ -1.21
SDC2-208ENST00000523877 UBASH3AP57075 661 aa7.52□□□□□ -1.21
SDC2-208ENST00000523877 PDE4BQ07343 736 aa7.52□□□□□ -1.21
SDC2-208ENST00000523877 SYCP1Q15431 976 aa7.52□□□□□ -1.21
SDC2-208ENST00000523877 E2F4Q16254 413 aa7.52□□□□□ -1.21
SDC2-208ENST00000523877 ALFQ53S48 1182 aa7.52□□□□□ -1.21
SDC2-208ENST00000523877 TSHZ3Q63HK5 1081 aa7.52□□□□□ -1.21
SDC2-208ENST00000523877 CEP135Q66GS9 1140 aa7.52□□□□□ -1.21
SDC2-208ENST00000523877 IRGCQ6NXR0 463 aa7.52□□□□□ -1.21
SDC2-208ENST00000523877 ZNF449Q6P9G9 518 aa7.52□□□□□ -1.21
SDC2-208ENST00000523877 NEK10Q6ZWH5 1172 aa7.52□□□□□ -1.21
SDC2-208ENST00000523877 SLC43A3Q8NBI5 491 aa7.52□□□□□ -1.21
SDC2-208ENST00000523877 RNF214Q8ND24 703 aa7.52□□□□□ -1.21
SDC2-208ENST00000523877 RASSF8Q8NHQ8 419 aa7.52□□□□□ -1.21
SDC2-208ENST00000523877 ERMNQ8TAM6 284 aa7.52□□□□□ -1.21
SDC2-208ENST00000523877 GSDMBQ8TAX9 411 aa7.52□□□□□ -1.21
SDC2-208ENST00000523877 GOLGA5Q8TBA6 731 aa7.52□□□□□ -1.21
SDC2-208ENST00000523877 ANKRD24Q8TF21 1146 aa7.52□□□□□ -1.21
SDC2-208ENST00000523877 JAKMIP2Q96AA8 810 aa7.52□□□□□ -1.21
SDC2-208ENST00000523877 SLC7A5P2Q9GIP4 190 aa7.52□□□□□ -1.21
SDC2-208ENST00000523877 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.52□□□□□ -1.21
SDC2-208ENST00000523877 RIC8AQ9NPQ8 531 aa7.52□□□□□ -1.21
SDC2-208ENST00000523877 NLRP2Q9NX02 1062 aa7.52□□□□□ -1.21
SDC2-208ENST00000523877 TPCN1Q9ULQ1 816 aa7.52□□□□□ -1.21
SDC2-208ENST00000523877 MRPL42Q9Y6G3 142 aaKnown RBP7.52□□□□□ -1.21
SDC2-208ENST00000523877 TBKBP1A7MCY6 615 aa7.51□□□□□ -1.21
SDC2-208ENST00000523877 GOLGA6L19H0YKK7 550 aa7.51□□□□□ -1.21
SDC2-208ENST00000523877 ZSCAN9O15535 394 aaPredicted RBP7.51□□□□□ -1.21
SDC2-208ENST00000523877 BAIAP3O94812 1187 aa7.51□□□□□ -1.21
SDC2-208ENST00000523877 MYL1P05976 194 aa7.51□□□□□ -1.21
SDC2-208ENST00000523877 HSPA4P34932 840 aa7.51□□□□□ -1.21
SDC2-208ENST00000523877 STK3Q13188 491 aa7.51□□□□□ -1.21
SDC2-208ENST00000523877 ARHGEF6Q15052 776 aa7.51□□□□□ -1.21
SDC2-208ENST00000523877 Q3C1V9 767 aa7.51□□□□□ -1.21
SDC2-208ENST00000523877 TBC1D25Q3MII6 688 aa7.51□□□□□ -1.21
SDC2-208ENST00000523877 GNPTABQ3T906 1256 aa7.51□□□□□ -1.21
SDC2-208ENST00000523877 SPDYCQ5MJ68 293 aa7.51□□□□□ -1.21
SDC2-208ENST00000523877 SUN5Q8TC36 379 aa7.51□□□□□ -1.21
SDC2-208ENST00000523877 ANKRD49Q8WVL7 239 aa7.51□□□□□ -1.21
SDC2-208ENST00000523877 UPF1Q92900 1129 aaKnown RBP eCLIP7.51□□□□□ -1.21
SDC2-208ENST00000523877 KCNK17Q96T54 332 aa7.51□□□□□ -1.21
SDC2-208ENST00000523877 IER2Q9BTL4 223 aa7.51□□□□□ -1.21
SDC2-208ENST00000523877 RABEP2Q9H5N1 569 aa7.51□□□□□ -1.21
SDC2-208ENST00000523877 ARNT2Q9HBZ2 717 aa7.51□□□□□ -1.21
SDC2-208ENST00000523877 TCF7L2Q9NQB0 619 aa7.51□□□□□ -1.21
SDC2-208ENST00000523877 KRT82Q9NSB4 513 aa7.51□□□□□ -1.21
SDC2-208ENST00000523877 PGAP2Q9UHJ9 254 aa7.51□□□□□ -1.21
SDC2-208ENST00000523877 MRPS23Q9Y3D9 190 aaKnown RBP7.51□□□□□ -1.21
SDC2-208ENST00000523877 SPAG9O60271 1321 aaKnown RBP7.51□□□□□ -1.21
SDC2-208ENST00000523877 EVC2Q86UK5 1308 aa7.51□□□□□ -1.21
SDC2-208ENST00000523877 LINC00854A0A1B0GVQ3 168 aa7.5□□□□□ -1.21
SDC2-208ENST00000523877 SPDYE5A6NIY4 337 aa7.5□□□□□ -1.21
SDC2-208ENST00000523877 PRRT4C9JH25 899 aa7.5□□□□□ -1.21
SDC2-208ENST00000523877 C21orf2O43822 256 aa7.5□□□□□ -1.21
SDC2-208ENST00000523877 AKR1B10O60218 316 aa7.5□□□□□ -1.21
SDC2-208ENST00000523877 STAM2O75886 525 aa7.5□□□□□ -1.21
SDC2-208ENST00000523877 ATF7P17544 494 aaPredicted RBP7.5□□□□□ -1.21
SDC2-208ENST00000523877 MSNP26038 577 aaKnown RBP7.5□□□□□ -1.21
SDC2-208ENST00000523877 NOS2P35228 1153 aa7.5□□□□□ -1.21
SDC2-208ENST00000523877 NF2P35240 595 aa7.5□□□□□ -1.21
SDC2-208ENST00000523877 MATR3P43243 847 aaKnown RBP eCLIP7.5□□□□□ -1.21
SDC2-208ENST00000523877 NUCB1Q02818 461 aa7.5□□□□□ -1.21
SDC2-208ENST00000523877 IKQ13123 557 aaPredicted RBP7.5□□□□□ -1.21
SDC2-208ENST00000523877 TTC31Q49AM3 519 aaPredicted RBP7.5□□□□□ -1.21
SDC2-208ENST00000523877 HS1BP3Q53T59 392 aa7.5□□□□□ -1.21
SDC2-208ENST00000523877 MUM1L1Q5H9M0 696 aa7.5□□□□□ -1.21
SDC2-208ENST00000523877 ISM2Q6H9L7 571 aa7.5□□□□□ -1.21
SDC2-208ENST00000523877 SDCCAG8Q86SQ7 713 aaPredicted RBP7.5□□□□□ -1.21
SDC2-208ENST00000523877 FERMT3Q86UX7 667 aa7.5□□□□□ -1.21
SDC2-208ENST00000523877 ERC1Q8IUD2 1116 aa7.5□□□□□ -1.21
SDC2-208ENST00000523877 PPHLN1Q8NEY8 458 aaKnown RBP7.5□□□□□ -1.21
SDC2-208ENST00000523877 BRSK1Q8TDC3 778 aa7.5□□□□□ -1.21
SDC2-208ENST00000523877 OXER1Q8TDS5 423 aa7.5□□□□□ -1.21
SDC2-208ENST00000523877 TSR2Q969E8 191 aaKnown RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms