RNA–Protein interactions for RNA: ENST00000523856.5

FCHSD1-210, Transcript of FCH and double SH3 domains 1, human

TSL 2

Gene FCHSD1, Length 3,932 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FCHSD1-210	ENST00000523856	PTPN21	Q16825	1174 aa		13.74	□□□□□ -0.21
FCHSD1-210	ENST00000523856	MAP9	Q49MG5	647 aa		13.74	□□□□□ -0.21
FCHSD1-210	ENST00000523856	CTAGE6	Q86UF2	777 aa		13.74	□□□□□ -0.21
FCHSD1-210	ENST00000523856	CTAGE4	Q8IX94	777 aa		13.74	□□□□□ -0.21
FCHSD1-210	ENST00000523856	FAM107B	Q9H098	131 aa		13.74	□□□□□ -0.21
FCHSD1-210	ENST00000523856	PTPRU	Q92729	1446 aa		13.74	□□□□□ -0.21
FCHSD1-210	ENST00000523856	POTEB2	H3BUK9	544 aa		13.74	□□□□□ -0.21
FCHSD1-210	ENST00000523856	IRS4	O14654	1257 aa	Predicted RBP	13.74	□□□□□ -0.21
FCHSD1-210	ENST00000523856	FAM98C	Q17RN3	349 aa	Known RBP	13.74	□□□□□ -0.21
FCHSD1-210	ENST00000523856	CCDC181	Q5TID7	509 aa		13.74	□□□□□ -0.21
FCHSD1-210	ENST00000523856	PI16	Q6UXB8	463 aa		13.74	□□□□□ -0.21
FCHSD1-210	ENST00000523856	NAPB	Q9H115	298 aa		13.74	□□□□□ -0.21
FCHSD1-210	ENST00000523856	PAG1	Q9NWQ8	432 aa		13.74	□□□□□ -0.21
FCHSD1-210	ENST00000523856	ZNF213	O14771	459 aa		13.74	□□□□□ -0.21
FCHSD1-210	ENST00000523856	RPS6KB1	P23443	525 aa		13.74	□□□□□ -0.21
FCHSD1-210	ENST00000523856	DNAJC21	Q5F1R6	531 aa	Known RBP	13.74	□□□□□ -0.21
FCHSD1-210	ENST00000523856	CPSF1	Q10570	1443 aa	Known RBP	13.74	□□□□□ -0.21
FCHSD1-210	ENST00000523856	ADAMTS13	Q76LX8	1427 aa		13.74	□□□□□ -0.21
FCHSD1-210	ENST00000523856	MARCH6	O60337	910 aa		13.73	□□□□□ -0.21
FCHSD1-210	ENST00000523856	WDHD1	O75717	1129 aa	Predicted RBP	13.73	□□□□□ -0.21
FCHSD1-210	ENST00000523856	TNNI3K	Q59H18	835 aa		13.73	□□□□□ -0.21
FCHSD1-210	ENST00000523856	ZNF569	Q5MCW4	686 aa		13.73	□□□□□ -0.21
FCHSD1-210	ENST00000523856	CCDC102B	Q68D86	513 aa		13.73	□□□□□ -0.21
FCHSD1-210	ENST00000523856	ZKSCAN3	Q9BRR0	538 aa		13.73	□□□□□ -0.21
FCHSD1-210	ENST00000523856	FPGT-TNNI3K	V9GXZ4	949 aa		13.73	□□□□□ -0.21
FCHSD1-210	ENST00000523856	ANKRD65	E5RJM6	399 aa		13.73	□□□□□ -0.21
FCHSD1-210	ENST00000523856	HMGB1	P09429	215 aa	Known RBP	13.73	□□□□□ -0.21
FCHSD1-210	ENST00000523856	KCNG4	Q8TDN1	519 aa		13.73	□□□□□ -0.21
FCHSD1-210	ENST00000523856	BAG1	Q99933	345 aa	Predicted RBP	13.73	□□□□□ -0.21
FCHSD1-210	ENST00000523856	MROH1	Q8NDA8	1641 aa		13.73	□□□□□ -0.21
FCHSD1-210	ENST00000523856	NBPF11	Q86T75	865 aa		13.73	□□□□□ -0.21
FCHSD1-210	ENST00000523856	TMEM87A	Q8NBN3	555 aa		13.73	□□□□□ -0.21
FCHSD1-210	ENST00000523856	ZNHIT6	Q9NWK9	470 aa	Known RBP	13.73	□□□□□ -0.21
FCHSD1-210	ENST00000523856	NPHP4	O75161	1426 aa	Predicted RBP	13.73	□□□□□ -0.21
FCHSD1-210	ENST00000523856	RANBP6	O60518	1105 aa	Known RBP	13.72	□□□□□ -0.21
FCHSD1-210	ENST00000523856	SLFN14	P0C7P3	912 aa		13.72	□□□□□ -0.21
FCHSD1-210	ENST00000523856	NUP88	Q99567	741 aa	Predicted RBP	13.72	□□□□□ -0.21
FCHSD1-210	ENST00000523856	SSH2	Q76I76	1423 aa		13.72	□□□□□ -0.21
FCHSD1-210	ENST00000523856	CCDC175	P0C221	793 aa		13.72	□□□□□ -0.21
FCHSD1-210	ENST00000523856	DNA2	P51530	1060 aa		13.72	□□□□□ -0.21
FCHSD1-210	ENST00000523856	RAD51AP2	Q09MP3	1159 aa		13.72	□□□□□ -0.21
FCHSD1-210	ENST00000523856	HDX	Q7Z353	690 aa		13.72	□□□□□ -0.21
FCHSD1-210	ENST00000523856	PPP1R13B	Q96KQ4	1090 aa		13.72	□□□□□ -0.21
FCHSD1-210	ENST00000523856	FTO	Q9C0B1	505 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
FCHSD1-210	ENST00000523856	VWDE	Q8N2E2	1590 aa		13.72	□□□□□ -0.21
FCHSD1-210	ENST00000523856	MATR3	P43243	847 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
FCHSD1-210	ENST00000523856	TTC41P	Q6P2S7	1318 aa		13.72	□□□□□ -0.21
FCHSD1-210	ENST00000523856	CLSTN1	O94985	981 aa		13.71	□□□□□ -0.21
FCHSD1-210	ENST00000523856	CHMP4BP1	P59074	171 aa		13.71	□□□□□ -0.21
FCHSD1-210	ENST00000523856	GOLGA8F	Q08AF8	430 aa		13.71	□□□□□ -0.21
FCHSD1-210	ENST00000523856	GOLGA8DP	Q0D2H9	430 aa		13.71	□□□□□ -0.21
FCHSD1-210	ENST00000523856	LSG1	Q9H089	658 aa	Known RBP	13.71	□□□□□ -0.21
FCHSD1-210	ENST00000523856	ANKIB1	Q9P2G1	1089 aa		13.71	□□□□□ -0.21
FCHSD1-210	ENST00000523856	AKAP2	Q9Y2D5	859 aa		13.71	□□□□□ -0.21
FCHSD1-210	ENST00000523856	USP28	Q96RU2	1077 aa		13.71	□□□□□ -0.21
FCHSD1-210	ENST00000523856	TMEM51	Q9NW97	253 aa		13.71	□□□□□ -0.21
FCHSD1-210	ENST00000523856	PCDH11X	Q9BZA7	1347 aa		13.71	□□□□□ -0.21
FCHSD1-210	ENST00000523856	PCDH11Y	Q9BZA8	1340 aa		13.71	□□□□□ -0.21
FCHSD1-210	ENST00000523856	CTIF	O43310	598 aa	Known RBP	13.71	□□□□□ -0.21
FCHSD1-210	ENST00000523856	ZPR1	O75312	459 aa		13.71	□□□□□ -0.21
FCHSD1-210	ENST00000523856	MYL5	Q02045	173 aa		13.71	□□□□□ -0.21
FCHSD1-210	ENST00000523856	MCMDC2	Q4G0Z9	681 aa		13.71	□□□□□ -0.21
FCHSD1-210	ENST00000523856	PLBD2	Q8NHP8	589 aa		13.71	□□□□□ -0.21
FCHSD1-210	ENST00000523856	IMPACT	Q9P2X3	320 aa		13.71	□□□□□ -0.21
FCHSD1-210	ENST00000523856	KLF18	A0A0U1RQI7	1052 aa		13.71	□□□□□ -0.22
FCHSD1-210	ENST00000523856	EPC1	Q9H2F5	836 aa		13.71	□□□□□ -0.22
FCHSD1-210	ENST00000523856	RRP15	Q9Y3B9	282 aa	Known RBP	13.71	□□□□□ -0.22
FCHSD1-210	ENST00000523856	EBAG9	O00559	213 aa		13.7	□□□□□ -0.22
FCHSD1-210	ENST00000523856	ITGA6	P23229	1130 aa		13.7	□□□□□ -0.22
FCHSD1-210	ENST00000523856	GDAP1L1	Q96MZ0	367 aa		13.7	□□□□□ -0.22
FCHSD1-210	ENST00000523856	DESI2	Q9BSY9	194 aa		13.7	□□□□□ -0.22
FCHSD1-210	ENST00000523856	STX17	P56962	302 aa		13.7	□□□□□ -0.22
FCHSD1-210	ENST00000523856	TRIM22	Q8IYM9	498 aa		13.7	□□□□□ -0.22
FCHSD1-210	ENST00000523856	CEP112	Q8N8E3	955 aa		13.7	□□□□□ -0.22
FCHSD1-210	ENST00000523856	ZSWIM6	Q9HCJ5	1215 aa		13.7	□□□□□ -0.22
FCHSD1-210	ENST00000523856	CTAGE9	A4FU28	777 aa		13.7	□□□□□ -0.22
FCHSD1-210	ENST00000523856	MYO1C	O00159	1063 aa		13.7	□□□□□ -0.22
FCHSD1-210	ENST00000523856	IGKV5-2	P06315	115 aa		13.7	□□□□□ -0.22
FCHSD1-210	ENST00000523856	IL15	P40933	162 aa	Predicted RBP	13.7	□□□□□ -0.22
FCHSD1-210	ENST00000523856	EIF5	P55010	431 aa	Known RBP	13.7	□□□□□ -0.22
FCHSD1-210	ENST00000523856	CT47A1	Q5JQC4	288 aa	Predicted RBP	13.7	□□□□□ -0.22
FCHSD1-210	ENST00000523856	UBAC1	Q9BSL1	405 aa		13.7	□□□□□ -0.22
FCHSD1-210	ENST00000523856	MAGEC2	Q9UBF1	373 aa	Predicted RBP	13.7	□□□□□ -0.22
FCHSD1-210	ENST00000523856	CD163L1	Q9NR16	1453 aa		13.69	□□□□□ -0.22
FCHSD1-210	ENST00000523856	ELP1	O95163	1332 aa		13.69	□□□□□ -0.22
FCHSD1-210	ENST00000523856	IFIT3	O14879	490 aa	Known RBP	13.69	□□□□□ -0.22
FCHSD1-210	ENST00000523856	MTX1	Q13505	466 aa		13.69	□□□□□ -0.22
FCHSD1-210	ENST00000523856	ODF2	Q5BJF6	829 aa		13.69	□□□□□ -0.22
FCHSD1-210	ENST00000523856	BRINP3	Q76B58	766 aa		13.69	□□□□□ -0.22
FCHSD1-210	ENST00000523856	MYL10	Q9BUA6	226 aa		13.69	□□□□□ -0.22
FCHSD1-210	ENST00000523856	DBNL	Q9UJU6	430 aa	Known RBP	13.69	□□□□□ -0.22
FCHSD1-210	ENST00000523856	SASH1	O94885	1247 aa		13.69	□□□□□ -0.22
FCHSD1-210	ENST00000523856	SART3	Q15020	963 aa	Known RBP	13.69	□□□□□ -0.22
FCHSD1-210	ENST00000523856	ZNF589	Q86UQ0	364 aa	Predicted RBP	13.69	□□□□□ -0.22
FCHSD1-210	ENST00000523856	CAPZA3	Q96KX2	299 aa		13.69	□□□□□ -0.22
FCHSD1-210	ENST00000523856	TM6SF1	Q9BZW5	370 aa		13.69	□□□□□ -0.22
FCHSD1-210	ENST00000523856	BABAM1	Q9NWV8	329 aa		13.69	□□□□□ -0.22
FCHSD1-210	ENST00000523856	AP5Z1	O43299	807 aa		13.69	□□□□□ -0.22
FCHSD1-210	ENST00000523856	CDKL5	O76039	1030 aa		13.69	□□□□□ -0.22
FCHSD1-210	ENST00000523856	E2F4	Q16254	413 aa		13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms