RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 EPHX2P34913 555 aa7.22□□□□□ -1.25
PABPC1-223ENST00000523636 CLDN10P78369 228 aa7.22□□□□□ -1.25
PABPC1-223ENST00000523636 CRTC2Q53ET0 693 aaPredicted RBP7.22□□□□□ -1.25
PABPC1-223ENST00000523636 TMCO4Q5TGY1 634 aa7.22□□□□□ -1.25
PABPC1-223ENST00000523636 SIX5Q8N196 739 aa7.22□□□□□ -1.25
PABPC1-223ENST00000523636 KCNH5Q8NCM2 988 aa7.22□□□□□ -1.25
PABPC1-223ENST00000523636 POLR3GLQ9BT43 218 aa7.22□□□□□ -1.25
PABPC1-223ENST00000523636 PRO3102Q9H379 93 aa7.22□□□□□ -1.25
PABPC1-223ENST00000523636 TMPRSS4Q9NRS4 437 aa7.22□□□□□ -1.25
PABPC1-223ENST00000523636 NOVA2Q9UNW9 492 aaKnown RBP7.22□□□□□ -1.25
PABPC1-223ENST00000523636 PCDHGA11Q9Y5H2 935 aa7.22□□□□□ -1.25
PABPC1-223ENST00000523636 BDP1A6H8Y1 2624 aa7.21□□□□□ -1.25
PABPC1-223ENST00000523636 LOC102724428A0A0B4J2F2 783 aa7.21□□□□□ -1.26
PABPC1-223ENST00000523636 TNFRSF10AO00220 468 aa7.21□□□□□ -1.26
PABPC1-223ENST00000523636 POLRMTO00411 1230 aaKnown RBP7.21□□□□□ -1.26
PABPC1-223ENST00000523636 ZBTB7BO15156 539 aaPredicted RBP7.21□□□□□ -1.26
PABPC1-223ENST00000523636 LILRA1O75019 489 aa7.21□□□□□ -1.26
PABPC1-223ENST00000523636 SCTRP47872 440 aa7.21□□□□□ -1.26
PABPC1-223ENST00000523636 MFAP1P55081 439 aaKnown RBP7.21□□□□□ -1.26
PABPC1-223ENST00000523636 SIK1P57059 783 aa7.21□□□□□ -1.26
PABPC1-223ENST00000523636 MPRIPQ6WCQ1 1025 aa7.21□□□□□ -1.26
PABPC1-223ENST00000523636 ANKMY2Q8IV38 441 aa7.21□□□□□ -1.26
PABPC1-223ENST00000523636 ZCRB1Q8TBF4 217 aaKnown RBP7.21□□□□□ -1.26
PABPC1-223ENST00000523636 SLC4A9Q96Q91 983 aa7.21□□□□□ -1.26
PABPC1-223ENST00000523636 SLX4Q8IY92 1834 aa7.21□□□□□ -1.26
PABPC1-223ENST00000523636 MON2Q7Z3U7 1717 aa7.21□□□□□ -1.26
PABPC1-223ENST00000523636 H0YGN5 161 aa7.2□□□□□ -1.26
PABPC1-223ENST00000523636 J3QL48 77 aa7.2□□□□□ -1.26
PABPC1-223ENST00000523636 DKK1O94907 266 aa7.2□□□□□ -1.26
PABPC1-223ENST00000523636 SMPD1P17405 629 aa7.2□□□□□ -1.26
PABPC1-223ENST00000523636 CYP2U1Q7Z449 544 aa7.2□□□□□ -1.26
PABPC1-223ENST00000523636 FAM200AQ8TCP9 573 aa7.2□□□□□ -1.26
PABPC1-223ENST00000523636 PIGBQ92521 554 aa7.2□□□□□ -1.26
PABPC1-223ENST00000523636 KLF16Q9BXK1 252 aaPredicted RBP7.2□□□□□ -1.26
PABPC1-223ENST00000523636 IRX2Q9BZI1 471 aaPredicted RBP7.2□□□□□ -1.26
PABPC1-223ENST00000523636 OSBPL3Q9H4L5 887 aa7.2□□□□□ -1.26
PABPC1-223ENST00000523636 RNF186Q9NXI6 227 aa7.2□□□□□ -1.26
PABPC1-223ENST00000523636 SRP68Q9UHB9 627 aaKnown RBP7.2□□□□□ -1.26
PABPC1-223ENST00000523636 HACL1Q9UJ83 578 aa7.2□□□□□ -1.26
PABPC1-223ENST00000523636 ZMIZ1Q9ULJ6 1067 aa7.2□□□□□ -1.26
PABPC1-223ENST00000523636 RNF123Q5XPI4 1314 aa7.2□□□□□ -1.26
PABPC1-223ENST00000523636 TTC21BQ7Z4L5 1316 aa7.2□□□□□ -1.26
PABPC1-223ENST00000523636 LTBP3Q9NS15 1303 aa7.2□□□□□ -1.26
PABPC1-223ENST00000523636 ZFHX4Q86UP3 3567 aa7.2□□□□□ -1.26
PABPC1-223ENST00000523636 CARMIL3Q8ND23 1372 aa7.2□□□□□ -1.26
PABPC1-223ENST00000523636 FAM155AB1AL88 458 aaPredicted RBP7.19□□□□□ -1.26
PABPC1-223ENST00000523636 TRAPPC3LQ5T215 181 aa7.19□□□□□ -1.26
PABPC1-223ENST00000523636 AEBP1Q8IUX7 1158 aa7.19□□□□□ -1.26
PABPC1-223ENST00000523636 TTLL6Q8N841 843 aa7.19□□□□□ -1.26
PABPC1-223ENST00000523636 HHIPL1Q96JK4 782 aa7.19□□□□□ -1.26
PABPC1-223ENST00000523636 CYLDQ9NQC7 956 aa7.19□□□□□ -1.26
PABPC1-223ENST00000523636 SAGE1Q9NXZ1 904 aa7.19□□□□□ -1.26
PABPC1-223ENST00000523636 RBM19Q9Y4C8 960 aaKnown RBP7.19□□□□□ -1.26
PABPC1-223ENST00000523636 KDRP35968 1356 aa7.19□□□□□ -1.26
PABPC1-223ENST00000523636 ZNF831Q5JPB2 1677 aa7.19□□□□□ -1.26
PABPC1-223ENST00000523636 NCOR1O75376 2440 aa7.18□□□□□ -1.26
PABPC1-223ENST00000523636 M0R2N6 131 aa7.18□□□□□ -1.26
PABPC1-223ENST00000523636 TRPA1O75762 1119 aa7.18□□□□□ -1.26
PABPC1-223ENST00000523636 GNRH1P01148 92 aa7.18□□□□□ -1.26
PABPC1-223ENST00000523636 TM4SF1P30408 202 aa7.18□□□□□ -1.26
PABPC1-223ENST00000523636 SEC13P55735 322 aa7.18□□□□□ -1.26
PABPC1-223ENST00000523636 DPYDQ12882 1025 aa7.18□□□□□ -1.26
PABPC1-223ENST00000523636 TAF7LQ5H9L4 462 aa7.18□□□□□ -1.26
PABPC1-223ENST00000523636 CCDC102BQ68D86 513 aa7.18□□□□□ -1.26
PABPC1-223ENST00000523636 Q6ZVU0 165 aa7.18□□□□□ -1.26
PABPC1-223ENST00000523636 ZNF594Q96JF6 807 aaPredicted RBP7.18□□□□□ -1.26
PABPC1-223ENST00000523636 CABP1Q9NZU7 370 aa7.18□□□□□ -1.26
PABPC1-223ENST00000523636 USP31Q70CQ4 1352 aa7.18□□□□□ -1.26
PABPC1-223ENST00000523636 USP34Q70CQ2 3546 aa7.18□□□□□ -1.26
PABPC1-223ENST00000523636 BCORQ6W2J9 1755 aa7.18□□□□□ -1.26
PABPC1-223ENST00000523636 ARFGEF2Q9Y6D5 1785 aa7.18□□□□□ -1.26
PABPC1-223ENST00000523636 C21orf2O43822 256 aa7.17□□□□□ -1.26
PABPC1-223ENST00000523636 SWI5Q1ZZU3 235 aa7.17□□□□□ -1.26
PABPC1-223ENST00000523636 TMEM164Q5U3C3 297 aa7.17□□□□□ -1.26
PABPC1-223ENST00000523636 SYNE4Q8N205 404 aa7.17□□□□□ -1.26
PABPC1-223ENST00000523636 TPCN2Q8NHX9 752 aa7.17□□□□□ -1.26
PABPC1-223ENST00000523636 ASAP1Q9ULH1 1129 aa7.17□□□□□ -1.26
PABPC1-223ENST00000523636 PDZRN3Q9UPQ7 1066 aa7.17□□□□□ -1.26
PABPC1-223ENST00000523636 KIAA1024Q9UPX6 916 aa7.17□□□□□ -1.26
PABPC1-223ENST00000523636 WDFY4Q6ZS81 3184 aa7.16□□□□□ -1.26
PABPC1-223ENST00000523636 COL4A5P29400 1685 aa7.16□□□□□ -1.26
PABPC1-223ENST00000523636 CYP27B1O15528 508 aa7.16□□□□□ -1.26
PABPC1-223ENST00000523636 ZIC2O95409 532 aaPredicted RBP7.16□□□□□ -1.26
PABPC1-223ENST00000523636 ADH1AP07327 375 aa7.16□□□□□ -1.26
PABPC1-223ENST00000523636 TIMP2P16035 220 aa7.16□□□□□ -1.26
PABPC1-223ENST00000523636 EN2P19622 333 aaPredicted RBP7.16□□□□□ -1.26
PABPC1-223ENST00000523636 ADD1P35611 737 aaKnown RBP7.16□□□□□ -1.26
PABPC1-223ENST00000523636 WDR4P57081 412 aaKnown RBP7.16□□□□□ -1.26
PABPC1-223ENST00000523636 PNMA8AQ86V59 439 aaPredicted RBP7.16□□□□□ -1.26
PABPC1-223ENST00000523636 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.16□□□□□ -1.26
PABPC1-223ENST00000523636 STK32AQ8WU08 396 aa7.16□□□□□ -1.26
PABPC1-223ENST00000523636 SMARCC1Q92922 1105 aaPredicted RBP7.16□□□□□ -1.26
PABPC1-223ENST00000523636 ITPKCQ96DU7 683 aa7.16□□□□□ -1.26
PABPC1-223ENST00000523636 RTCBQ9Y3I0 505 aaKnown RBP7.16□□□□□ -1.26
PABPC1-223ENST00000523636 CFAP54Q96N23 3096 aa7.16□□□□□ -1.26
PABPC1-223ENST00000523636 E9PSI1 815 aa7.15□□□□□ -1.26
PABPC1-223ENST00000523636 CELF2O95319 508 aaKnown RBP7.15□□□□□ -1.26
PABPC1-223ENST00000523636 HMGB2P26583 209 aaKnown RBP7.15□□□□□ -1.26
PABPC1-223ENST00000523636 NOGQ13253 232 aa7.15□□□□□ -1.26
PABPC1-223ENST00000523636 LAPTM4AQ15012 233 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 233.4 ms