RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 LDLRAD1Q5T700 205 aa25.82■■□□□ 1.72
SDCBP-209ENST00000522243 REM2Q8IYK8 340 aaPredicted RBP25.82■■□□□ 1.72
SDCBP-209ENST00000522243 TBC1D22AQ8WUA7 517 aa25.82■■□□□ 1.72
SDCBP-209ENST00000522243 LPIN2Q92539 896 aa25.82■■□□□ 1.72
SDCBP-209ENST00000522243 HDAC5Q9UQL6 1122 aa25.82■■□□□ 1.72
SDCBP-209ENST00000522243 SUPT20HL1Q3ZLR7 823 aa25.81■■□□□ 1.72
SDCBP-209ENST00000522243 CEP126Q9P2H0 1117 aa25.81■■□□□ 1.72
SDCBP-209ENST00000522243 TCP10L2B9ZVM9 353 aa25.8■■□□□ 1.72
SDCBP-209ENST00000522243 PPP1R12BO60237 982 aaPredicted RBP25.8■■□□□ 1.72
SDCBP-209ENST00000522243 CIAO1O76071 339 aa25.8■■□□□ 1.72
SDCBP-209ENST00000522243 TRIM27P14373 513 aa25.8■■□□□ 1.72
SDCBP-209ENST00000522243 DGKZQ13574 1117 aa25.8■■□□□ 1.72
SDCBP-209ENST00000522243 MCOLN1Q9GZU1 580 aa25.8■■□□□ 1.72
SDCBP-209ENST00000522243 FBXO3Q9UK99 471 aa25.8■■□□□ 1.72
SDCBP-209ENST00000522243 IPO8O15397 1037 aaKnown RBP25.79■■□□□ 1.72
SDCBP-209ENST00000522243 ATP2B3Q16720 1220 aa25.79■■□□□ 1.72
SDCBP-209ENST00000522243 CLUAP1Q96AJ1 413 aa25.79■■□□□ 1.72
SDCBP-209ENST00000522243 TNFAIP1Q13829 316 aa25.78■■□□□ 1.72
SDCBP-209ENST00000522243 MAP3K11Q16584 847 aa25.78■■□□□ 1.72
SDCBP-209ENST00000522243 SLC10A4Q96EP9 437 aa25.78■■□□□ 1.72
SDCBP-209ENST00000522243 CLMNQ96JQ2 1002 aa25.78■■□□□ 1.72
SDCBP-209ENST00000522243 USP2O75604 605 aaPredicted RBP25.77■■□□□ 1.72
SDCBP-209ENST00000522243 GNAI3P08754 354 aa25.77■■□□□ 1.72
SDCBP-209ENST00000522243 IL15P40933 162 aaPredicted RBP25.77■■□□□ 1.72
SDCBP-209ENST00000522243 HDLBPQ00341 1268 aaKnown RBP25.77■■□□□ 1.72
SDCBP-209ENST00000522243 SPRYD7Q5W111 196 aa25.77■■□□□ 1.72
SDCBP-209ENST00000522243 ATF7IPQ6VMQ6 1270 aa25.77■■□□□ 1.72
SDCBP-209ENST00000522243 CDAN1Q8IWY9 1227 aa25.77■■□□□ 1.72
SDCBP-209ENST00000522243 TEKT1Q969V4 418 aa25.77■■□□□ 1.72
SDCBP-209ENST00000522243 COPRSQ9NQ92 184 aa25.77■■□□□ 1.72
SDCBP-209ENST00000522243 CCDC85CA6NKD9 419 aa25.76■■□□□ 1.71
SDCBP-209ENST00000522243 TBC1D8O95759 1140 aa25.76■■□□□ 1.71
SDCBP-209ENST00000522243 TM4SF4P48230 202 aa25.76■■□□□ 1.71
SDCBP-209ENST00000522243 CACNB3P54284 484 aa25.76■■□□□ 1.71
SDCBP-209ENST00000522243 TMEM39BQ9GZU3 492 aa25.75■■□□□ 1.71
SDCBP-209ENST00000522243 SRGAP3O43295 1099 aa25.74■■□□□ 1.71
SDCBP-209ENST00000522243 IREB2P48200 963 aaKnown RBP25.74■■□□□ 1.71
SDCBP-209ENST00000522243 TNNI2P48788 182 aa25.74■■□□□ 1.71
SDCBP-209ENST00000522243 WDR66Q8TBY9 1149 aa25.74■■□□□ 1.71
SDCBP-209ENST00000522243 TEPSINQ96N21 525 aa25.74■■□□□ 1.71
SDCBP-209ENST00000522243 ADORA1P30542 326 aa25.73■■□□□ 1.71
SDCBP-209ENST00000522243 SREBF2Q12772 1141 aa25.73■■□□□ 1.71
SDCBP-209ENST00000522243 WNK4Q96J92 1243 aa25.73■■□□□ 1.71
SDCBP-209ENST00000522243 ZDHHC15Q96MV8 337 aa25.73■■□□□ 1.71
SDCBP-209ENST00000522243 SUGT1Q9Y2Z0 365 aa25.73■■□□□ 1.71
SDCBP-209ENST00000522243 MAST3O60307 1309 aa25.72■■□□□ 1.71
SDCBP-209ENST00000522243 PHKA1P46020 1223 aa25.72■■□□□ 1.71
SDCBP-209ENST00000522243 APOBEC3HQ6NTF7 200 aaKnown RBP25.72■■□□□ 1.71
SDCBP-209ENST00000522243 GNL3LQ9NVN8 582 aaKnown RBP25.72■■□□□ 1.71
SDCBP-209ENST00000522243 OTOFQ9HC10 1997 aa25.72■■□□□ 1.71
SDCBP-209ENST00000522243 ZKSCAN2Q63HK3 967 aa25.71■■□□□ 1.71
SDCBP-209ENST00000522243 MRIQ9BWK5 157 aa25.71■■□□□ 1.71
SDCBP-209ENST00000522243 TIMM10P62072 90 aa25.7■■□□□ 1.7
SDCBP-209ENST00000522243 MTX1Q13505 466 aa25.7■■□□□ 1.7
SDCBP-209ENST00000522243 ANKRD13AQ8IZ07 590 aa25.7■■□□□ 1.7
SDCBP-209ENST00000522243 TMEM57Q8N5G2 664 aa25.7■■□□□ 1.7
SDCBP-209ENST00000522243 TMOD2Q9NZR1 351 aa25.7■■□□□ 1.7
SDCBP-209ENST00000522243 MANSC4A6NHS7 340 aaPredicted RBP25.69■■□□□ 1.7
SDCBP-209ENST00000522243 GNAI2P04899 355 aa25.69■■□□□ 1.7
SDCBP-209ENST00000522243 PRDX5P30044 214 aa25.69■■□□□ 1.7
SDCBP-209ENST00000522243 TFCP2Q12800 502 aa25.69■■□□□ 1.7
SDCBP-209ENST00000522243 HHIPL2Q6UWX4 724 aa25.69■■□□□ 1.7
SDCBP-209ENST00000522243 UNCXA6NJT0 531 aa25.68■■□□□ 1.7
SDCBP-209ENST00000522243 ZBTB48P10074 688 aaPredicted RBP25.68■■□□□ 1.7
SDCBP-209ENST00000522243 GJA5P36382 358 aa25.68■■□□□ 1.7
SDCBP-209ENST00000522243 DIXDC1Q155Q3 683 aa25.68■■□□□ 1.7
SDCBP-209ENST00000522243 CCDC102BQ68D86 513 aa25.68■■□□□ 1.7
SDCBP-209ENST00000522243 R3HDMLQ9H3Y0 253 aa25.68■■□□□ 1.7
SDCBP-209ENST00000522243 ELP3Q9H9T3 547 aa25.68■■□□□ 1.7
SDCBP-209ENST00000522243 DENND2AQ9ULE3 1009 aa25.68■■□□□ 1.7
SDCBP-209ENST00000522243 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.68■■□□□ 1.7
SDCBP-209ENST00000522243 ZNF296Q8WUU4 475 aaPredicted RBP25.67■■□□□ 1.7
SDCBP-209ENST00000522243 DAGLAQ9Y4D2 1042 aa25.67■■□□□ 1.7
SDCBP-209ENST00000522243 PNMA6EA0A0J9YXQ4 647 aa25.66■■□□□ 1.7
SDCBP-209ENST00000522243 A0A1B0GUL7 405 aa25.66■■□□□ 1.7
SDCBP-209ENST00000522243 GPR25O00155 361 aa25.66■■□□□ 1.7
SDCBP-209ENST00000522243 LDHBP07195 334 aaKnown RBP25.66■■□□□ 1.7
SDCBP-209ENST00000522243 CTU1Q7Z7A3 348 aaKnown RBP25.66■■□□□ 1.7
SDCBP-209ENST00000522243 LAMB1P07942 1786 aa25.65■■□□□ 1.7
SDCBP-209ENST00000522243 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.65■■□□□ 1.7
SDCBP-209ENST00000522243 IFNL1Q8IU54 200 aa25.65■■□□□ 1.7
SDCBP-209ENST00000522243 XAGE2Q96GT9 111 aa25.65■■□□□ 1.7
SDCBP-209ENST00000522243 SEMA3EO15041 775 aa25.64■■□□□ 1.7
SDCBP-209ENST00000522243 INHBEP58166 350 aa25.64■■□□□ 1.7
SDCBP-209ENST00000522243 MAP3K9P80192 1104 aa25.64■■□□□ 1.7
SDCBP-209ENST00000522243 FAM83AQ86UY5 434 aa25.64■■□□□ 1.7
SDCBP-209ENST00000522243 CNKSR2Q8WXI2 1034 aa25.64■■□□□ 1.7
SDCBP-209ENST00000522243 OPTNQ96CV9 577 aa25.64■■□□□ 1.7
SDCBP-209ENST00000522243 NEUROD6Q96NK8 337 aa25.64■■□□□ 1.7
SDCBP-209ENST00000522243 AKAP2Q9Y2D5 859 aa25.64■■□□□ 1.7
SDCBP-209ENST00000522243 IGF2BP3O00425 579 aaKnown RBP eCLIP25.63■■□□□ 1.69
SDCBP-209ENST00000522243 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.63■■□□□ 1.69
SDCBP-209ENST00000522243 SALL1Q9NSC2 1324 aa25.63■■□□□ 1.69
SDCBP-209ENST00000522243 ALDH1A1P00352 501 aa25.62■■□□□ 1.69
SDCBP-209ENST00000522243 G3BP1Q13283 466 aaKnown RBP eCLIP25.62■■□□□ 1.69
SDCBP-209ENST00000522243 RASGRF1Q13972 1273 aa25.62■■□□□ 1.69
SDCBP-209ENST00000522243 VGLL4Q14135 290 aa25.62■■□□□ 1.69
SDCBP-209ENST00000522243 FKBP1CQ5VVH2 108 aa25.62■■□□□ 1.69
SDCBP-209ENST00000522243 CDC42EP5Q6NZY7 148 aa25.62■■□□□ 1.69
SDCBP-209ENST00000522243 MYH2Q9UKX2 1941 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms