RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 PCGF6Q9BYE7 350 aa14.34□□□□□ -0.11
CTNNA1-234ENST00000522227 TMEM39BQ9GZU3 492 aa14.34□□□□□ -0.11
CTNNA1-234ENST00000522227 TDRD3Q9H7E2 651 aaKnown RBP14.34□□□□□ -0.11
CTNNA1-234ENST00000522227 CD209Q9NNX6 404 aa14.34□□□□□ -0.11
CTNNA1-234ENST00000522227 DBF4Q9UBU7 674 aaPredicted RBP14.34□□□□□ -0.11
CTNNA1-234ENST00000522227 ZNF70Q9UC06 446 aaPredicted RBP14.34□□□□□ -0.11
CTNNA1-234ENST00000522227 TAOK2Q9UL54 1235 aa14.34□□□□□ -0.11
CTNNA1-234ENST00000522227 LEMD3Q9Y2U8 911 aa14.34□□□□□ -0.11
CTNNA1-234ENST00000522227 ALPK3Q96L96 1907 aa14.33□□□□□ -0.11
CTNNA1-234ENST00000522227 IRF6O14896 467 aa14.33□□□□□ -0.12
CTNNA1-234ENST00000522227 GOLGA2Q08379 1002 aa14.33□□□□□ -0.12
CTNNA1-234ENST00000522227 SNAPC2Q13487 334 aa14.33□□□□□ -0.12
CTNNA1-234ENST00000522227 GUCD1Q96NT3 240 aa14.33□□□□□ -0.12
CTNNA1-234ENST00000522227 HYPKQ9NX55 129 aa14.33□□□□□ -0.12
CTNNA1-234ENST00000522227 CWC25Q9NXE8 425 aaPredicted RBP14.33□□□□□ -0.12
CTNNA1-234ENST00000522227 SPDYE5A6NIY4 337 aa14.32□□□□□ -0.12
CTNNA1-234ENST00000522227 ADCY3O60266 1144 aa14.32□□□□□ -0.12
CTNNA1-234ENST00000522227 INHAP05111 366 aa14.32□□□□□ -0.12
CTNNA1-234ENST00000522227 NECAB2Q7Z6G3 386 aa14.32□□□□□ -0.12
CTNNA1-234ENST00000522227 SLAIN1Q8ND83 568 aa14.32□□□□□ -0.12
CTNNA1-234ENST00000522227 ZKSCAN4Q969J2 545 aaPredicted RBP14.32□□□□□ -0.12
CTNNA1-234ENST00000522227 PHAXQ9H814 394 aaKnown RBP14.32□□□□□ -0.12
CTNNA1-234ENST00000522227 PDHXO00330 501 aa14.31□□□□□ -0.12
CTNNA1-234ENST00000522227 IGHMBP2P38935 993 aaKnown RBP14.31□□□□□ -0.12
CTNNA1-234ENST00000522227 TNFAIP1Q13829 316 aa14.31□□□□□ -0.12
CTNNA1-234ENST00000522227 CCDC191Q8NCU4 936 aa14.31□□□□□ -0.12
CTNNA1-234ENST00000522227 HELBQ8NG08 1087 aaPredicted RBP14.31□□□□□ -0.12
CTNNA1-234ENST00000522227 TTLL11Q8NHH1 800 aa14.31□□□□□ -0.12
CTNNA1-234ENST00000522227 TEPSINQ96N21 525 aa14.31□□□□□ -0.12
CTNNA1-234ENST00000522227 SNCAIPQ9Y6H5 919 aa14.31□□□□□ -0.12
CTNNA1-234ENST00000522227 FCGRTP55899 365 aa14.3□□□□□ -0.12
CTNNA1-234ENST00000522227 NEUROD2Q15784 382 aa14.3□□□□□ -0.12
CTNNA1-234ENST00000522227 ERO1BQ86YB8 467 aa14.3□□□□□ -0.12
CTNNA1-234ENST00000522227 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.3□□□□□ -0.12
CTNNA1-234ENST00000522227 WRNIP1Q96S55 665 aa14.3□□□□□ -0.12
CTNNA1-234ENST00000522227 BABAM1Q9NWV8 329 aa14.3□□□□□ -0.12
CTNNA1-234ENST00000522227 SPDYE2Q495Y8 402 aa14.29□□□□□ -0.12
CTNNA1-234ENST00000522227 ANKRD2Q9GZV1 360 aa14.29□□□□□ -0.12
CTNNA1-234ENST00000522227 ZCCHC17Q9NP64 241 aaKnown RBP14.29□□□□□ -0.12
CTNNA1-234ENST00000522227 TAF5LO75529 589 aa14.28□□□□□ -0.12
CTNNA1-234ENST00000522227 FLT3LGP49771 235 aa14.27□□□□□ -0.13
CTNNA1-234ENST00000522227 CACNB3P54284 484 aa14.27□□□□□ -0.13
CTNNA1-234ENST00000522227 MDM2Q00987 491 aaPredicted RBP14.27□□□□□ -0.13
CTNNA1-234ENST00000522227 CHRNDQ07001 517 aa14.27□□□□□ -0.13
CTNNA1-234ENST00000522227 PPIL2Q13356 520 aa14.27□□□□□ -0.13
CTNNA1-234ENST00000522227 DUSP27Q5VZP5 1158 aa14.27□□□□□ -0.13
CTNNA1-234ENST00000522227 MAFAQ8NHW3 353 aaPredicted RBP14.27□□□□□ -0.13
CTNNA1-234ENST00000522227 MPHOSPH8Q99549 860 aa14.27□□□□□ -0.13
CTNNA1-234ENST00000522227 PNNQ9H307 717 aaKnown RBP14.27□□□□□ -0.13
CTNNA1-234ENST00000522227 ADGRA2Q96PE1 1338 aa14.26□□□□□ -0.13
CTNNA1-234ENST00000522227 CHL1O00533 1208 aa14.26□□□□□ -0.13
CTNNA1-234ENST00000522227 CYP2C8P10632 490 aa14.26□□□□□ -0.13
CTNNA1-234ENST00000522227 TNNI2P48788 182 aa14.26□□□□□ -0.13
CTNNA1-234ENST00000522227 ANKRD23Q86SG2 305 aa14.26□□□□□ -0.13
CTNNA1-234ENST00000522227 TTF2Q9UNY4 1162 aaKnown RBP14.26□□□□□ -0.13
CTNNA1-234ENST00000522227 ELL2O00472 640 aaPredicted RBP14.25□□□□□ -0.13
CTNNA1-234ENST00000522227 ITGA6P23229 1130 aa14.25□□□□□ -0.13
CTNNA1-234ENST00000522227 TMPOP42166 694 aaKnown RBP14.25□□□□□ -0.13
CTNNA1-234ENST00000522227 LMOD3Q0VAK6 560 aa14.25□□□□□ -0.13
CTNNA1-234ENST00000522227 TRIM26Q12899 539 aaPredicted RBP14.25□□□□□ -0.13
CTNNA1-234ENST00000522227 ZNF804AQ7Z570 1209 aa14.25□□□□□ -0.13
CTNNA1-234ENST00000522227 DZIP1LQ8IYY4 767 aaKnown RBP14.25□□□□□ -0.13
CTNNA1-234ENST00000522227 METTL22Q9BUU2 404 aaPredicted RBP14.25□□□□□ -0.13
CTNNA1-234ENST00000522227 CRISPLD2Q9H0B8 497 aa14.25□□□□□ -0.13
CTNNA1-234ENST00000522227 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.25□□□□□ -0.13
CTNNA1-234ENST00000522227 PAK6Q9NQU5 681 aaPredicted RBP14.25□□□□□ -0.13
CTNNA1-234ENST00000522227 POTEB2H3BUK9 544 aa14.24□□□□□ -0.13
CTNNA1-234ENST00000522227 INPP5BP32019 993 aa14.24□□□□□ -0.13
CTNNA1-234ENST00000522227 ZNF697Q5TEC3 545 aa14.24□□□□□ -0.13
CTNNA1-234ENST00000522227 MIGA2Q7L4E1 593 aa14.24□□□□□ -0.13
CTNNA1-234ENST00000522227 CDX2Q99626 313 aaPredicted RBP14.24□□□□□ -0.13
CTNNA1-234ENST00000522227 VCANP13611 3396 aa14.23□□□□□ -0.13
CTNNA1-234ENST00000522227 TMEM265A0A087WTH1 108 aa14.23□□□□□ -0.13
CTNNA1-234ENST00000522227 TNPO2O14787 897 aaKnown RBP14.23□□□□□ -0.13
CTNNA1-234ENST00000522227 PLIN1O60240 522 aa14.23□□□□□ -0.13
CTNNA1-234ENST00000522227 IL1R1P14778 569 aa14.23□□□□□ -0.13
CTNNA1-234ENST00000522227 FAM122AQ96E09 287 aa14.23□□□□□ -0.13
CTNNA1-234ENST00000522227 PARK7Q99497 189 aaKnown RBP14.23□□□□□ -0.13
CTNNA1-234ENST00000522227 NBPF3Q9H094 633 aa14.23□□□□□ -0.13
CTNNA1-234ENST00000522227 C11orf49Q9H6J7 331 aa14.23□□□□□ -0.13
CTNNA1-234ENST00000522227 MAP3K2Q9Y2U5 619 aa14.23□□□□□ -0.13
CTNNA1-234ENST00000522227 MGAMO43451 1857 aa14.23□□□□□ -0.13
CTNNA1-234ENST00000522227 ARAP2Q8WZ64 1704 aa14.22□□□□□ -0.13
CTNNA1-234ENST00000522227 HOXB7P09629 217 aa14.22□□□□□ -0.13
CTNNA1-234ENST00000522227 BCRP11274 1271 aa14.22□□□□□ -0.13
CTNNA1-234ENST00000522227 PLA2G5P39877 138 aa14.22□□□□□ -0.13
CTNNA1-234ENST00000522227 CRKP46108 304 aa14.22□□□□□ -0.13
CTNNA1-234ENST00000522227 FKBP1AP62942 108 aaKnown RBP14.22□□□□□ -0.13
CTNNA1-234ENST00000522227 PPATQ06203 517 aa14.22□□□□□ -0.13
CTNNA1-234ENST00000522227 MFSD14BQ5SR56 506 aa14.22□□□□□ -0.13
CTNNA1-234ENST00000522227 UBE3BQ7Z3V4 1068 aa14.22□□□□□ -0.13
CTNNA1-234ENST00000522227 MYLIPQ8WY64 445 aa14.22□□□□□ -0.13
CTNNA1-234ENST00000522227 SYMPKQ92797 1274 aaKnown RBP14.22□□□□□ -0.13
CTNNA1-234ENST00000522227 IGKV5-2P06315 115 aa14.21□□□□□ -0.13
CTNNA1-234ENST00000522227 CWF19L2Q2TBE0 894 aaKnown RBP14.21□□□□□ -0.13
CTNNA1-234ENST00000522227 FAM109BQ6ICB4 259 aaPredicted RBP14.21□□□□□ -0.13
CTNNA1-234ENST00000522227 CCDC146Q8IYE0 955 aa14.21□□□□□ -0.13
CTNNA1-234ENST00000522227 PXYLP1Q8TE99 480 aa14.21□□□□□ -0.13
CTNNA1-234ENST00000522227 SERPINA10Q9UK55 444 aa14.21□□□□□ -0.13
CTNNA1-234ENST00000522227 MYH3P11055 1940 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms