RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 ELP1O95163 1332 aa15.74■□□□□ 0.11
SYNPO-205ENST00000522122 DCAF8L1A6NGE4 600 aa15.74■□□□□ 0.11
SYNPO-205ENST00000522122 IL17REQ8NFR9 667 aa15.74■□□□□ 0.11
SYNPO-205ENST00000522122 CNKSR2Q8WXI2 1034 aa15.74■□□□□ 0.11
SYNPO-205ENST00000522122 SUCLG2Q96I99 432 aa15.74■□□□□ 0.11
SYNPO-205ENST00000522122 IQSEC3Q9UPP2 1182 aaPredicted RBP15.74■□□□□ 0.11
SYNPO-205ENST00000522122 CTAGE15A4D2H0 777 aa15.74■□□□□ 0.11
SYNPO-205ENST00000522122 CTAGE8P0CG41 777 aa15.74■□□□□ 0.11
SYNPO-205ENST00000522122 HMGB2P26583 209 aaKnown RBP15.74■□□□□ 0.11
SYNPO-205ENST00000522122 CYLC1P35663 651 aaPredicted RBP15.74■□□□□ 0.11
SYNPO-205ENST00000522122 CTAGE6Q86UF2 777 aa15.74■□□□□ 0.11
SYNPO-205ENST00000522122 CTAGE4Q8IX94 777 aa15.74■□□□□ 0.11
SYNPO-205ENST00000522122 RPGRQ92834 1020 aaKnown RBP15.74■□□□□ 0.11
SYNPO-205ENST00000522122 KIDINS220Q9ULH0 1771 aa15.74■□□□□ 0.11
SYNPO-205ENST00000522122 ZRSR2Q15696 482 aaKnown RBP15.73■□□□□ 0.11
SYNPO-205ENST00000522122 SPECC1Q5M775 1068 aa15.73■□□□□ 0.11
SYNPO-205ENST00000522122 NAA16Q6N069 864 aaPredicted RBP15.73■□□□□ 0.11
SYNPO-205ENST00000522122 FAM173BQ6P4H8 233 aa15.73■□□□□ 0.11
SYNPO-205ENST00000522122 EXOC1Q9NV70 894 aa15.73■□□□□ 0.11
SYNPO-205ENST00000522122 FBXO3Q9UK99 471 aa15.73■□□□□ 0.11
SYNPO-205ENST00000522122 TBX22Q9Y458 520 aa15.73■□□□□ 0.11
SYNPO-205ENST00000522122 CCDC175P0C221 793 aa15.73■□□□□ 0.11
SYNPO-205ENST00000522122 STAT6P42226 847 aa15.73■□□□□ 0.11
SYNPO-205ENST00000522122 TNNI3KQ59H18 835 aa15.73■□□□□ 0.11
SYNPO-205ENST00000522122 DYDC1Q8WWB3 177 aa15.73■□□□□ 0.11
SYNPO-205ENST00000522122 CUL5Q93034 780 aa15.73■□□□□ 0.11
SYNPO-205ENST00000522122 LRRC27Q9C0I9 530 aa15.73■□□□□ 0.11
SYNPO-205ENST00000522122 TPCN1Q9ULQ1 816 aa15.73■□□□□ 0.11
SYNPO-205ENST00000522122 FPGT-TNNI3KV9GXZ4 949 aa15.73■□□□□ 0.11
SYNPO-205ENST00000522122 RASEFQ8IZ41 740 aa15.73■□□□□ 0.11
SYNPO-205ENST00000522122 DCAF5Q96JK2 942 aa15.73■□□□□ 0.11
SYNPO-205ENST00000522122 TMCO5BA8MYB1 307 aa15.73■□□□□ 0.11
SYNPO-205ENST00000522122 GNAQP50148 359 aa15.73■□□□□ 0.11
SYNPO-205ENST00000522122 GTF3C6Q969F1 213 aa15.73■□□□□ 0.11
SYNPO-205ENST00000522122 DHX58Q96C10 678 aa15.73■□□□□ 0.11
SYNPO-205ENST00000522122 FAM107BQ9H098 131 aa15.72■□□□□ 0.11
SYNPO-205ENST00000522122 CCDC113Q9H0I3 377 aa15.72■□□□□ 0.11
SYNPO-205ENST00000522122 C6orf229H3BNL8 230 aa15.72■□□□□ 0.11
SYNPO-205ENST00000522122 PSMA7O14818 248 aa15.72■□□□□ 0.11
SYNPO-205ENST00000522122 LIG1P18858 919 aa15.72■□□□□ 0.11
SYNPO-205ENST00000522122 NOP2P46087 812 aaKnown RBP15.72■□□□□ 0.11
SYNPO-205ENST00000522122 PIP4K2BP78356 416 aa15.72■□□□□ 0.11
SYNPO-205ENST00000522122 PIK3C2BO00750 1634 aa15.72■□□□□ 0.11
SYNPO-205ENST00000522122 KIF20BQ96Q89 1820 aa15.72■□□□□ 0.11
SYNPO-205ENST00000522122 U2AF2P26368 475 aaKnown RBP eCLIP15.72■□□□□ 0.11
SYNPO-205ENST00000522122 MATR3P43243 847 aaKnown RBP eCLIP15.72■□□□□ 0.11
SYNPO-205ENST00000522122 POLA2Q14181 598 aa15.72■□□□□ 0.11
SYNPO-205ENST00000522122 LGR6Q9HBX8 967 aa15.72■□□□□ 0.11
SYNPO-205ENST00000522122 IMPACTQ9P2X3 320 aa15.72■□□□□ 0.11
SYNPO-205ENST00000522122 A0A1B0GVL5 298 aa15.71■□□□□ 0.11
SYNPO-205ENST00000522122 CKAP4Q07065 602 aaKnown RBP15.71■□□□□ 0.11
SYNPO-205ENST00000522122 MRVI1Q9Y6F6 885 aa15.71■□□□□ 0.11
SYNPO-205ENST00000522122 CDC25BP30305 580 aa15.71■□□□□ 0.11
SYNPO-205ENST00000522122 SLC4A8Q2Y0W8 1093 aa15.71■□□□□ 0.11
SYNPO-205ENST00000522122 ARHGEF28Q8N1W1 1705 aaKnown RBP15.71■□□□□ 0.11
SYNPO-205ENST00000522122 MYO1BO43795 1136 aa15.71■□□□□ 0.11
SYNPO-205ENST00000522122 GNAT2P19087 354 aa15.71■□□□□ 0.11
SYNPO-205ENST00000522122 CETN1Q12798 172 aa15.71■□□□□ 0.11
SYNPO-205ENST00000522122 MCM6Q14566 821 aa15.71■□□□□ 0.11
SYNPO-205ENST00000522122 RNF216Q9NWF9 866 aaPredicted RBP15.71■□□□□ 0.11
SYNPO-205ENST00000522122 PYCARDQ9ULZ3 195 aa15.71■□□□□ 0.11
SYNPO-205ENST00000522122 TIMM10P62072 90 aa15.71■□□□□ 0.1
SYNPO-205ENST00000522122 GABPB1Q06547 395 aaPredicted RBP15.71■□□□□ 0.1
SYNPO-205ENST00000522122 GBP2P32456 591 aaPredicted RBP15.7■□□□□ 0.1
SYNPO-205ENST00000522122 METTL22Q9BUU2 404 aaPredicted RBP15.7■□□□□ 0.1
SYNPO-205ENST00000522122 PRR36Q9H6K5 1346 aa15.7■□□□□ 0.1
SYNPO-205ENST00000522122 A2ML1A8K2U0 1454 aa15.7■□□□□ 0.1
SYNPO-205ENST00000522122 PLCD4Q9BRC7 762 aa15.7■□□□□ 0.1
SYNPO-205ENST00000522122 BCCIPQ9P287 314 aaKnown RBP eCLIP15.7■□□□□ 0.1
SYNPO-205ENST00000522122 CDC42BPGQ6DT37 1551 aa15.7■□□□□ 0.1
SYNPO-205ENST00000522122 CCDC129Q6ZRS4 1044 aa15.7■□□□□ 0.1
SYNPO-205ENST00000522122 TTC6Q86TZ1 520 aa15.7■□□□□ 0.1
SYNPO-205ENST00000522122 PI4K2BQ8TCG2 481 aa15.7■□□□□ 0.1
SYNPO-205ENST00000522122 SYT10Q6XYQ8 523 aa15.7■□□□□ 0.1
SYNPO-205ENST00000522122 MICALCLQ6ZW33 695 aa15.7■□□□□ 0.1
SYNPO-205ENST00000522122 ATP10DQ9P241 1426 aa15.69■□□□□ 0.1
SYNPO-205ENST00000522122 MYL5Q02045 173 aa15.69■□□□□ 0.1
SYNPO-205ENST00000522122 MAPK8IP2Q13387 824 aaPredicted RBP15.69■□□□□ 0.1
SYNPO-205ENST00000522122 CEP112Q8N8E3 955 aa15.69■□□□□ 0.1
SYNPO-205ENST00000522122 DBNDD2Q9BQY9 259 aa15.69■□□□□ 0.1
SYNPO-205ENST00000522122 MAP2K1Q02750 393 aaPredicted RBP15.69■□□□□ 0.1
SYNPO-205ENST00000522122 GOPCQ9HD26 462 aa15.69■□□□□ 0.1
SYNPO-205ENST00000522122 PLEKHG1Q9ULL1 1385 aa15.69■□□□□ 0.1
SYNPO-205ENST00000522122 TSPY3P0CV98 308 aa15.69■□□□□ 0.1
SYNPO-205ENST00000522122 TSPY8P0CW00 308 aa15.69■□□□□ 0.1
SYNPO-205ENST00000522122 CALM1P0DP23 149 aa15.69■□□□□ 0.1
SYNPO-205ENST00000522122 CALM2P0DP24 149 aa15.69■□□□□ 0.1
SYNPO-205ENST00000522122 CALM3P0DP25 149 aa15.69■□□□□ 0.1
SYNPO-205ENST00000522122 TDRD7Q8NHU6 1098 aaKnown RBP15.69■□□□□ 0.1
SYNPO-205ENST00000522122 GSTTP1A0A1W2PQM5 241 aa15.69■□□□□ 0.1
SYNPO-205ENST00000522122 JAK2O60674 1132 aa15.69■□□□□ 0.1
SYNPO-205ENST00000522122 KCNA6P17658 529 aa15.69■□□□□ 0.1
SYNPO-205ENST00000522122 CALML3P27482 149 aa15.69■□□□□ 0.1
SYNPO-205ENST00000522122 TIGD1Q96MW7 591 aa15.69■□□□□ 0.1
SYNPO-205ENST00000522122 ROBO2Q9HCK4 1378 aa15.69■□□□□ 0.1
SYNPO-205ENST00000522122 A0A0D9SFI3 127 aa15.68■□□□□ 0.1
SYNPO-205ENST00000522122 CTAGE9A4FU28 777 aa15.68■□□□□ 0.1
SYNPO-205ENST00000522122 ZNF790Q6PG37 636 aa15.68■□□□□ 0.1
SYNPO-205ENST00000522122 KRI1Q8N9T8 703 aaKnown RBP15.68■□□□□ 0.1
SYNPO-205ENST00000522122 TSC1Q92574 1164 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms