RNA–Protein interactions for RNA: ENST00000521902.5

RUNX1T1-238, Transcript of RUNX1 translocation partner 1, human

TSL 4

Gene RUNX1T1, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUNX1T1-238	ENST00000521902	RBM27	Q9P2N5	1060 aa	Known RBP	18.23	■□□□□ 0.51
RUNX1T1-238	ENST00000521902	TTF2	Q9UNY4	1162 aa	Known RBP	18.23	■□□□□ 0.51
RUNX1T1-238	ENST00000521902	CSAD	Q9Y600	493 aa		18.23	■□□□□ 0.51
RUNX1T1-238	ENST00000521902	CEP290	O15078	2479 aa		18.23	■□□□□ 0.51
RUNX1T1-238	ENST00000521902	TCP10L2	B9ZVM9	353 aa		18.22	■□□□□ 0.51
RUNX1T1-238	ENST00000521902	CETP	P11597	493 aa		18.22	■□□□□ 0.51
RUNX1T1-238	ENST00000521902	FLII	Q13045	1269 aa		18.22	■□□□□ 0.51
RUNX1T1-238	ENST00000521902	TWISTNB	Q3B726	338 aa	Predicted RBP	18.22	■□□□□ 0.51
RUNX1T1-238	ENST00000521902	DNAAF4	Q8WXU2	420 aa		18.22	■□□□□ 0.51
RUNX1T1-238	ENST00000521902	TSR2	Q969E8	191 aa	Known RBP	18.22	■□□□□ 0.51
RUNX1T1-238	ENST00000521902	SPDYE5	A6NIY4	337 aa		18.21	■□□□□ 0.51
RUNX1T1-238	ENST00000521902	TNNI2	P48788	182 aa		18.21	■□□□□ 0.51
RUNX1T1-238	ENST00000521902	DPF3	Q92784	378 aa		18.21	■□□□□ 0.51
RUNX1T1-238	ENST00000521902	RANBP2	P49792	3224 aa	Known RBP	18.21	■□□□□ 0.51
RUNX1T1-238	ENST00000521902	LAMB1	P07942	1786 aa		18.2	■□□□□ 0.5
RUNX1T1-238	ENST00000521902	BTBD19	C9JJ37	291 aa		18.2	■□□□□ 0.5
RUNX1T1-238	ENST00000521902	PLIN1	O60240	522 aa		18.2	■□□□□ 0.5
RUNX1T1-238	ENST00000521902	LDHAL6A	Q6ZMR3	332 aa		18.2	■□□□□ 0.5
RUNX1T1-238	ENST00000521902	ERO1B	Q86YB8	467 aa		18.2	■□□□□ 0.5
RUNX1T1-238	ENST00000521902	SHISA4	Q96DD7	197 aa		18.2	■□□□□ 0.5
RUNX1T1-238	ENST00000521902	CHMP3	Q9Y3E7	222 aa		18.2	■□□□□ 0.5
RUNX1T1-238	ENST00000521902	HIBADH	P31937	336 aa	Known RBP	18.19	■□□□□ 0.5
RUNX1T1-238	ENST00000521902	CRK	P46108	304 aa		18.19	■□□□□ 0.5
RUNX1T1-238	ENST00000521902	FKBP5	Q13451	457 aa	Predicted RBP	18.19	■□□□□ 0.5
RUNX1T1-238	ENST00000521902	MTFR1	Q15390	333 aa		18.19	■□□□□ 0.5
RUNX1T1-238	ENST00000521902	C17orf99	Q6UX52	265 aa		18.19	■□□□□ 0.5
RUNX1T1-238	ENST00000521902	FAM84B	Q96KN1	310 aa	Predicted RBP	18.19	■□□□□ 0.5
RUNX1T1-238	ENST00000521902	SNCAIP	Q9Y6H5	919 aa		18.19	■□□□□ 0.5
RUNX1T1-238	ENST00000521902	IRF6	O14896	467 aa		18.18	■□□□□ 0.5
RUNX1T1-238	ENST00000521902	SNAPC2	Q13487	334 aa		18.18	■□□□□ 0.5
RUNX1T1-238	ENST00000521902	UBE4A	Q14139	1066 aa		18.18	■□□□□ 0.5
RUNX1T1-238	ENST00000521902	CCDC57	Q2TAC2	916 aa		18.18	■□□□□ 0.5
RUNX1T1-238	ENST00000521902	LMBR1L	Q6UX01	489 aa		18.18	■□□□□ 0.5
RUNX1T1-238	ENST00000521902	UBE2Q1	Q7Z7E8	422 aa		18.18	■□□□□ 0.5
RUNX1T1-238	ENST00000521902	NKX2-3	Q8TAU0	364 aa		18.18	■□□□□ 0.5
RUNX1T1-238	ENST00000521902	ZNF594	Q96JF6	807 aa	Predicted RBP	18.18	■□□□□ 0.5
RUNX1T1-238	ENST00000521902	PRO3102	Q9H379	93 aa		18.18	■□□□□ 0.5
RUNX1T1-238	ENST00000521902	SPEF2	Q9C093	1822 aa		18.17	■□□□□ 0.5
RUNX1T1-238	ENST00000521902	CTGF	P29279	349 aa		18.17	■□□□□ 0.5
RUNX1T1-238	ENST00000521902	GYG1	P46976	350 aa		18.17	■□□□□ 0.5
RUNX1T1-238	ENST00000521902	EPHA10	Q5JZY3	1008 aa		18.17	■□□□□ 0.5
RUNX1T1-238	ENST00000521902	CNNM1	Q9NRU3	951 aa		18.17	■□□□□ 0.5
RUNX1T1-238	ENST00000521902	SRRD	Q9UH36	339 aa		18.17	■□□□□ 0.5
RUNX1T1-238	ENST00000521902	MYH3	P11055	1940 aa		18.17	■□□□□ 0.5
RUNX1T1-238	ENST00000521902	DLL1	O00548	723 aa		18.16	■□□□□ 0.5
RUNX1T1-238	ENST00000521902	HOXD10	P28358	340 aa		18.16	■□□□□ 0.5
RUNX1T1-238	ENST00000521902	GJA8	P48165	433 aa		18.16	■□□□□ 0.5
RUNX1T1-238	ENST00000521902	HDLBP	Q00341	1268 aa	Known RBP	18.16	■□□□□ 0.5
RUNX1T1-238	ENST00000521902	PPIL2	Q13356	520 aa		18.16	■□□□□ 0.5
RUNX1T1-238	ENST00000521902	ZKSCAN4	Q969J2	545 aa	Predicted RBP	18.16	■□□□□ 0.5
RUNX1T1-238	ENST00000521902	GJB1	P08034	283 aa		18.15	■□□□□ 0.5
RUNX1T1-238	ENST00000521902	PSMC4	P43686	418 aa		18.15	■□□□□ 0.5
RUNX1T1-238	ENST00000521902	GRIK5	Q16478	980 aa		18.15	■□□□□ 0.5
RUNX1T1-238	ENST00000521902	TAF7L	Q5H9L4	462 aa		18.15	■□□□□ 0.5
RUNX1T1-238	ENST00000521902	BEND3	Q5T5X7	828 aa		18.15	■□□□□ 0.5
RUNX1T1-238	ENST00000521902	SLC17A8	Q8NDX2	589 aa		18.15	■□□□□ 0.5
RUNX1T1-238	ENST00000521902	TRIM47	Q96LD4	638 aa		18.15	■□□□□ 0.5
RUNX1T1-238	ENST00000521902	WRNIP1	Q96S55	665 aa		18.15	■□□□□ 0.5
RUNX1T1-238	ENST00000521902	MRI	Q9BWK5	157 aa		18.15	■□□□□ 0.5
RUNX1T1-238	ENST00000521902	PRKRIP1	Q9H875	184 aa	Predicted RBP	18.15	■□□□□ 0.5
RUNX1T1-238	ENST00000521902	GRK4	P32298	578 aa		18.14	■□□□□ 0.49
RUNX1T1-238	ENST00000521902	CACNB3	P54284	484 aa		18.14	■□□□□ 0.49
RUNX1T1-238	ENST00000521902	PPAT	Q06203	517 aa		18.14	■□□□□ 0.49
RUNX1T1-238	ENST00000521902	CCDC27	Q2M243	656 aa		18.14	■□□□□ 0.49
RUNX1T1-238	ENST00000521902	FAM83A	Q86UY5	434 aa		18.14	■□□□□ 0.49
RUNX1T1-238	ENST00000521902	HTATIP2	Q9BUP3	242 aa		18.14	■□□□□ 0.49
RUNX1T1-238	ENST00000521902	CPA4	Q9UI42	421 aa		18.14	■□□□□ 0.49
RUNX1T1-238	ENST00000521902	RIPOR2	Q9Y4F9	1068 aa		18.14	■□□□□ 0.49
RUNX1T1-238	ENST00000521902	ECM2	O94769	699 aa	Predicted RBP	18.13	■□□□□ 0.49
RUNX1T1-238	ENST00000521902	FMNL1	O95466	1100 aa	Predicted RBP	18.13	■□□□□ 0.49
RUNX1T1-238	ENST00000521902	OSBP	P22059	807 aa		18.13	■□□□□ 0.49
RUNX1T1-238	ENST00000521902	FKBP1C	Q5VVH2	108 aa		18.13	■□□□□ 0.49
RUNX1T1-238	ENST00000521902	FBXO33	Q7Z6M2	555 aa		18.13	■□□□□ 0.49
RUNX1T1-238	ENST00000521902	WWC1	Q8IX03	1113 aa		18.13	■□□□□ 0.49
RUNX1T1-238	ENST00000521902	RAET1E	Q8TD07	263 aa		18.13	■□□□□ 0.49
RUNX1T1-238	ENST00000521902	HOOK2	Q96ED9	719 aa		18.13	■□□□□ 0.49
RUNX1T1-238	ENST00000521902	NR2E3	Q9Y5X4	410 aa		18.13	■□□□□ 0.49
RUNX1T1-238	ENST00000521902		F6X3S4	739 aa		18.12	■□□□□ 0.49
RUNX1T1-238	ENST00000521902	CCL5	P13501	91 aa		18.12	■□□□□ 0.49
RUNX1T1-238	ENST00000521902	ANKRD23	Q86SG2	305 aa		18.12	■□□□□ 0.49
RUNX1T1-238	ENST00000521902	TEKT1	Q969V4	418 aa		18.12	■□□□□ 0.49
RUNX1T1-238	ENST00000521902	ZDHHC15	Q96MV8	337 aa		18.12	■□□□□ 0.49
RUNX1T1-238	ENST00000521902	RNF208	Q9H0X6	261 aa		18.12	■□□□□ 0.49
RUNX1T1-238	ENST00000521902	ECM29	Q5VYK3	1845 aa		18.12	■□□□□ 0.49
RUNX1T1-238	ENST00000521902		A0A0C4DFX4	3053 aa		18.12	■□□□□ 0.49
RUNX1T1-238	ENST00000521902	GRM8	O00222	908 aa		18.11	■□□□□ 0.49
RUNX1T1-238	ENST00000521902	PDHX	O00330	501 aa		18.11	■□□□□ 0.49
RUNX1T1-238	ENST00000521902	ZBTB7B	O15156	539 aa	Predicted RBP	18.11	■□□□□ 0.49
RUNX1T1-238	ENST00000521902	VAMP4	O75379	141 aa		18.11	■□□□□ 0.49
RUNX1T1-238	ENST00000521902	APOBEC3H	Q6NTF7	200 aa	Known RBP	18.11	■□□□□ 0.49
RUNX1T1-238	ENST00000521902	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	18.11	■□□□□ 0.49
RUNX1T1-238	ENST00000521902	TBC1D22A	Q8WUA7	517 aa		18.11	■□□□□ 0.49
RUNX1T1-238	ENST00000521902	IL16	Q14005	1332 aa		18.1	■□□□□ 0.49
RUNX1T1-238	ENST00000521902	MYPN	Q86TC9	1320 aa		18.1	■□□□□ 0.49
RUNX1T1-238	ENST00000521902	ADGRA2	Q96PE1	1338 aa		18.1	■□□□□ 0.49
RUNX1T1-238	ENST00000521902	DCAF15	Q66K64	600 aa		18.1	■□□□□ 0.49
RUNX1T1-238	ENST00000521902	MIGA2	Q7L4E1	593 aa		18.1	■□□□□ 0.49
RUNX1T1-238	ENST00000521902	VPS37D	Q86XT2	251 aa		18.1	■□□□□ 0.49
RUNX1T1-238	ENST00000521902	PUS3	Q9BZE2	481 aa	Known RBP	18.1	■□□□□ 0.49
RUNX1T1-238	ENST00000521902	TMOD2	Q9NZR1	351 aa		18.1	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms