RNA–Protein interactions for RNA: ENST00000521724.5

CTNNA1-230, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-230ENST00000521724 E2F4Q16254 413 aa11.05□□□□□ -0.64
CTNNA1-230ENST00000521724 TMED8Q6PL24 325 aaPredicted RBP11.05□□□□□ -0.64
CTNNA1-230ENST00000521724 ABTB2Q8N961 1025 aa11.05□□□□□ -0.64
CTNNA1-230ENST00000521724 NSUN7Q8NE18 718 aaKnown RBP11.05□□□□□ -0.64
CTNNA1-230ENST00000521724 CCDC12Q8WUD4 166 aaPredicted RBP11.05□□□□□ -0.64
CTNNA1-230ENST00000521724 HNRNPLLQ8WVV9 542 aaKnown RBP11.05□□□□□ -0.64
CTNNA1-230ENST00000521724 BCCIPQ9P287 314 aaKnown RBP eCLIP11.05□□□□□ -0.64
CTNNA1-230ENST00000521724 PTPDC1A2A3K4 754 aa11.05□□□□□ -0.64
CTNNA1-230ENST00000521724 IKBKBO14920 756 aa11.05□□□□□ -0.64
CTNNA1-230ENST00000521724 ERLIN1O75477 346 aa11.05□□□□□ -0.64
CTNNA1-230ENST00000521724 BEND6Q5SZJ8 279 aaPredicted RBP11.05□□□□□ -0.64
CTNNA1-230ENST00000521724 BEND3Q5T5X7 828 aa11.05□□□□□ -0.64
CTNNA1-230ENST00000521724 DPF2Q92785 391 aa11.05□□□□□ -0.64
CTNNA1-230ENST00000521724 A0A1W2PQ27 194 aa11.04□□□□□ -0.64
CTNNA1-230ENST00000521724 A0A1W2PQ64 194 aa11.04□□□□□ -0.64
CTNNA1-230ENST00000521724 A0A1W2PQD8 194 aa11.04□□□□□ -0.64
CTNNA1-230ENST00000521724 PHACTR2O75167 634 aa11.04□□□□□ -0.64
CTNNA1-230ENST00000521724 PSEN1P49768 467 aa11.04□□□□□ -0.64
CTNNA1-230ENST00000521724 EIF4A1P60842 406 aaKnown RBP11.04□□□□□ -0.64
CTNNA1-230ENST00000521724 STK38Q15208 465 aa11.04□□□□□ -0.64
CTNNA1-230ENST00000521724 PTPN21Q16825 1174 aa11.04□□□□□ -0.64
CTNNA1-230ENST00000521724 NBPF6Q5VWK0 638 aa11.04□□□□□ -0.64
CTNNA1-230ENST00000521724 DNAAF4Q8WXU2 420 aa11.04□□□□□ -0.64
CTNNA1-230ENST00000521724 CCDC102AQ96A19 550 aa11.04□□□□□ -0.64
CTNNA1-230ENST00000521724 NBPF4Q96M43 638 aa11.04□□□□□ -0.64
CTNNA1-230ENST00000521724 BAG1Q99933 345 aaPredicted RBP11.04□□□□□ -0.64
CTNNA1-230ENST00000521724 CCDC8Q9H0W5 538 aaPredicted RBP11.04□□□□□ -0.64
CTNNA1-230ENST00000521724 KDM4CQ9H3R0 1056 aa11.04□□□□□ -0.64
CTNNA1-230ENST00000521724 LRRC37A3O60309 1634 aa11.04□□□□□ -0.64
CTNNA1-230ENST00000521724 PRAMEF22A3QJZ6 481 aa11.04□□□□□ -0.64
CTNNA1-230ENST00000521724 ZNF202O95125 648 aa11.04□□□□□ -0.64
CTNNA1-230ENST00000521724 VSTM4Q8IW00 320 aa11.04□□□□□ -0.64
CTNNA1-230ENST00000521724 PDILTQ8N807 584 aa11.04□□□□□ -0.64
CTNNA1-230ENST00000521724 KIFC2Q96AC6 838 aa11.04□□□□□ -0.64
CTNNA1-230ENST00000521724 AKAP2Q9Y2D5 859 aa11.04□□□□□ -0.64
CTNNA1-230ENST00000521724 MED23Q9ULK4 1368 aa11.04□□□□□ -0.64
CTNNA1-230ENST00000521724 TAF5LO75529 589 aa11.03□□□□□ -0.64
CTNNA1-230ENST00000521724 ZMYND10O75800 440 aa11.03□□□□□ -0.64
CTNNA1-230ENST00000521724 KCNA6P17658 529 aa11.03□□□□□ -0.64
CTNNA1-230ENST00000521724 CCT2P78371 535 aaKnown RBP11.03□□□□□ -0.64
CTNNA1-230ENST00000521724 LRRC31Q6UY01 552 aa11.03□□□□□ -0.64
CTNNA1-230ENST00000521724 CCDC91Q7Z6B0 441 aa11.03□□□□□ -0.64
CTNNA1-230ENST00000521724 TMEM139Q8IV31 216 aa11.03□□□□□ -0.64
CTNNA1-230ENST00000521724 EFCAB13Q8IY85 973 aa11.03□□□□□ -0.64
CTNNA1-230ENST00000521724 SEC62Q99442 399 aaKnown RBP11.03□□□□□ -0.64
CTNNA1-230ENST00000521724 HSD3B7Q9H2F3 369 aa11.03□□□□□ -0.64
CTNNA1-230ENST00000521724 PFKFB2O60825 505 aa11.03□□□□□ -0.64
CTNNA1-230ENST00000521724 ALDH1L1O75891 902 aa11.03□□□□□ -0.64
CTNNA1-230ENST00000521724 PROSER3Q2NL68 480 aa11.03□□□□□ -0.64
CTNNA1-230ENST00000521724 WWC2Q6AWC2 1192 aa11.03□□□□□ -0.64
CTNNA1-230ENST00000521724 SRGAP1Q7Z6B7 1085 aa11.03□□□□□ -0.64
CTNNA1-230ENST00000521724 LRRC59Q96AG4 307 aaKnown RBP11.03□□□□□ -0.64
CTNNA1-230ENST00000521724 SUGCTQ9HAC7 445 aa11.03□□□□□ -0.64
CTNNA1-230ENST00000521724 RTEL1Q9NZ71 1219 aa11.03□□□□□ -0.64
CTNNA1-230ENST00000521724 PUF60Q9UHX1 559 aaKnown RBP11.03□□□□□ -0.64
CTNNA1-230ENST00000521724 TMEM232C9JQI7 657 aa11.02□□□□□ -0.64
CTNNA1-230ENST00000521724 POTEB2H3BUK9 544 aa11.02□□□□□ -0.64
CTNNA1-230ENST00000521724 STX10O60499 249 aa11.02□□□□□ -0.64
CTNNA1-230ENST00000521724 WDHD1O75717 1129 aaPredicted RBP11.02□□□□□ -0.64
CTNNA1-230ENST00000521724 MYL5Q02045 173 aa11.02□□□□□ -0.64
CTNNA1-230ENST00000521724 KARSQ15046 597 aaKnown RBP11.02□□□□□ -0.64
CTNNA1-230ENST00000521724 USPL1Q5W0Q7 1092 aa11.02□□□□□ -0.64
CTNNA1-230ENST00000521724 MMS22LQ6ZRQ5 1243 aa11.02□□□□□ -0.64
CTNNA1-230ENST00000521724 TOGARAM2Q6ZUX3 1019 aa11.02□□□□□ -0.64
CTNNA1-230ENST00000521724 ILDR1Q86SU0 546 aaPredicted RBP11.02□□□□□ -0.64
CTNNA1-230ENST00000521724 SUGP1Q8IWZ8 645 aaKnown RBP11.02□□□□□ -0.64
CTNNA1-230ENST00000521724 LINC00301Q8NCQ3 95 aa11.02□□□□□ -0.64
CTNNA1-230ENST00000521724 CNNM3Q8NE01 707 aa11.02□□□□□ -0.64
CTNNA1-230ENST00000521724 EAF2Q96CJ1 260 aaPredicted RBP11.02□□□□□ -0.64
CTNNA1-230ENST00000521724 PLEKHA4Q9H4M7 779 aa11.02□□□□□ -0.64
CTNNA1-230ENST00000521724 ANKZF1Q9H8Y5 726 aa11.02□□□□□ -0.64
CTNNA1-230ENST00000521724 C9orf78Q9NZ63 289 aaPredicted RBP11.02□□□□□ -0.64
CTNNA1-230ENST00000521724 L1RE1Q9UN81 338 aa11.02□□□□□ -0.64
CTNNA1-230ENST00000521724 EID1Q9Y6B2 187 aa11.02□□□□□ -0.64
CTNNA1-230ENST00000521724 DIP2AQ14689 1571 aa11.02□□□□□ -0.64
CTNNA1-230ENST00000521724 NEDD4P46934 1319 aa11.02□□□□□ -0.65
CTNNA1-230ENST00000521724 CTDNEP1O95476 244 aa11.02□□□□□ -0.65
CTNNA1-230ENST00000521724 USP5P45974 858 aa11.02□□□□□ -0.65
CTNNA1-230ENST00000521724 MTX1Q13505 466 aa11.02□□□□□ -0.65
CTNNA1-230ENST00000521724 MPRIPQ6WCQ1 1025 aa11.02□□□□□ -0.65
CTNNA1-230ENST00000521724 MSL3Q8N5Y2 521 aaKnown RBP11.02□□□□□ -0.65
CTNNA1-230ENST00000521724 FAM71BQ8TC56 605 aa11.02□□□□□ -0.65
CTNNA1-230ENST00000521724 KCNG4Q8TDN1 519 aa11.02□□□□□ -0.65
CTNNA1-230ENST00000521724 BICC1Q9H694 974 aaKnown RBP11.02□□□□□ -0.65
CTNNA1-230ENST00000521724 ABCB6Q9NP58 842 aa11.02□□□□□ -0.65
CTNNA1-230ENST00000521724 TBX22Q9Y458 520 aa11.02□□□□□ -0.65
CTNNA1-230ENST00000521724 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.02□□□□□ -0.65
CTNNA1-230ENST00000521724 MARF1Q9Y4F3 1742 aaKnown RBP11.01□□□□□ -0.65
CTNNA1-230ENST00000521724 CUTAO60888 179 aa11.01□□□□□ -0.65
CTNNA1-230ENST00000521724 SKIDA1Q1XH10 827 aa11.01□□□□□ -0.65
CTNNA1-230ENST00000521724 DNAJC21Q5F1R6 531 aaKnown RBP11.01□□□□□ -0.65
CTNNA1-230ENST00000521724 MCTP2Q6DN12 878 aa11.01□□□□□ -0.65
CTNNA1-230ENST00000521724 PNKPQ96T60 521 aa11.01□□□□□ -0.65
CTNNA1-230ENST00000521724 NCOA5Q9HCD5 579 aaKnown RBP11.01□□□□□ -0.65
CTNNA1-230ENST00000521724 CLGNO14967 610 aa11.01□□□□□ -0.65
CTNNA1-230ENST00000521724 SPTLC2O15270 562 aa11.01□□□□□ -0.65
CTNNA1-230ENST00000521724 PPFIA4O75335 1185 aa11.01□□□□□ -0.65
CTNNA1-230ENST00000521724 POLR3DP05423 398 aaPredicted RBP11.01□□□□□ -0.65
CTNNA1-230ENST00000521724 CYP21A2P08686 494 aa11.01□□□□□ -0.65
CTNNA1-230ENST00000521724 G3BP1Q13283 466 aaKnown RBP eCLIP11.01□□□□□ -0.656e-8■■■□□ 14.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms