RNA–Protein interactions for RNA: ENST00000521683.5

CTNNA1-229, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-229ENST00000521683 TBC1D22AQ8WUA7 517 aa11.19□□□□□ -0.62
CTNNA1-229ENST00000521683 OTOFQ9HC10 1997 aa11.19□□□□□ -0.62
CTNNA1-229ENST00000521683 IGF2BP3O00425 579 aaKnown RBP eCLIP11.18□□□□□ -0.62
CTNNA1-229ENST00000521683 USP2O75604 605 aaPredicted RBP11.18□□□□□ -0.62
CTNNA1-229ENST00000521683 PDE8BO95263 885 aa11.18□□□□□ -0.62
CTNNA1-229ENST00000521683 CRKP46108 304 aa11.18□□□□□ -0.62
CTNNA1-229ENST00000521683 LRRC24Q50LG9 513 aa11.18□□□□□ -0.62
CTNNA1-229ENST00000521683 CAVIN4Q5BKX8 364 aa11.18□□□□□ -0.62
CTNNA1-229ENST00000521683 METTL24Q5JXM2 366 aa11.18□□□□□ -0.62
CTNNA1-229ENST00000521683 VPS37DQ86XT2 251 aa11.18□□□□□ -0.62
CTNNA1-229ENST00000521683 DZIP1LQ8IYY4 767 aaKnown RBP11.18□□□□□ -0.62
CTNNA1-229ENST00000521683 TEPSINQ96N21 525 aa11.18□□□□□ -0.62
CTNNA1-229ENST00000521683 R3HDMLQ9H3Y0 253 aa11.18□□□□□ -0.62
CTNNA1-229ENST00000521683 HTTP42858 3142 aa11.17□□□□□ -0.62
CTNNA1-229ENST00000521683 TESPA1A2RU30 521 aaPredicted RBP11.17□□□□□ -0.62
CTNNA1-229ENST00000521683 GJA5P36382 358 aa11.17□□□□□ -0.62
CTNNA1-229ENST00000521683 TNNI2P48788 182 aa11.17□□□□□ -0.62
CTNNA1-229ENST00000521683 OTUD7BQ6GQQ9 843 aa11.17□□□□□ -0.62
CTNNA1-229ENST00000521683 SSH1Q8WYL5 1049 aa11.17□□□□□ -0.62
CTNNA1-229ENST00000521683 MRIQ9BWK5 157 aa11.17□□□□□ -0.62
CTNNA1-229ENST00000521683 TDRD3Q9H7E2 651 aaKnown RBP11.17□□□□□ -0.62
CTNNA1-229ENST00000521683 SUGT1Q9Y2Z0 365 aa11.17□□□□□ -0.62
CTNNA1-229ENST00000521683 MAST3O60307 1309 aa11.16□□□□□ -0.62
CTNNA1-229ENST00000521683 FGFR2P21802 821 aa11.16□□□□□ -0.62
CTNNA1-229ENST00000521683 SLFN5Q08AF3 891 aa11.16□□□□□ -0.62
CTNNA1-229ENST00000521683 PUM3Q15397 648 aaKnown RBP11.16□□□□□ -0.62
CTNNA1-229ENST00000521683 ALDH1L2Q3SY69 923 aa11.16□□□□□ -0.62
CTNNA1-229ENST00000521683 TEKT1Q969V4 418 aa11.16□□□□□ -0.62
CTNNA1-229ENST00000521683 USP44Q9H0E7 712 aa11.16□□□□□ -0.62
CTNNA1-229ENST00000521683 RPAP1Q9BWH6 1393 aaPredicted RBP11.16□□□□□ -0.62
CTNNA1-229ENST00000521683 TCP10L2B9ZVM9 353 aa11.15□□□□□ -0.62
CTNNA1-229ENST00000521683 FRAT2O75474 233 aaPredicted RBP11.15□□□□□ -0.62
CTNNA1-229ENST00000521683 IFIT1P09914 478 aaKnown RBP11.15□□□□□ -0.62
CTNNA1-229ENST00000521683 CHAF1AQ13111 956 aaPredicted RBP11.15□□□□□ -0.62
CTNNA1-229ENST00000521683 GRIK5Q16478 980 aa11.15□□□□□ -0.62
CTNNA1-229ENST00000521683 FKBP1CQ5VVH2 108 aa11.15□□□□□ -0.62
CTNNA1-229ENST00000521683 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.15□□□□□ -0.62
CTNNA1-229ENST00000521683 OTOP1Q7RTM1 612 aa11.15□□□□□ -0.62
CTNNA1-229ENST00000521683 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.15□□□□□ -0.62
CTNNA1-229ENST00000521683 OPTNQ96CV9 577 aa11.15□□□□□ -0.62
CTNNA1-229ENST00000521683 ERO1AQ96HE7 468 aa11.15□□□□□ -0.62
CTNNA1-229ENST00000521683 ZDHHC15Q96MV8 337 aa11.15□□□□□ -0.62
CTNNA1-229ENST00000521683 TMEM39BQ9GZU3 492 aa11.15□□□□□ -0.62
CTNNA1-229ENST00000521683 IQSEC3Q9UPP2 1182 aaPredicted RBP11.15□□□□□ -0.62
CTNNA1-229ENST00000521683 EYA2O00167 538 aa11.14□□□□□ -0.63
CTNNA1-229ENST00000521683 CT47B1P0C2W7 299 aaPredicted RBP11.14□□□□□ -0.63
CTNNA1-229ENST00000521683 RFX5P48382 616 aaPredicted RBP11.14□□□□□ -0.63
CTNNA1-229ENST00000521683 BCAMP50895 628 aa11.14□□□□□ -0.63
CTNNA1-229ENST00000521683 MAP3K9P80192 1104 aa11.14□□□□□ -0.63
CTNNA1-229ENST00000521683 CRHR2Q13324 411 aa11.14□□□□□ -0.63
CTNNA1-229ENST00000521683 VGLL4Q14135 290 aa11.14□□□□□ -0.63
CTNNA1-229ENST00000521683 PRPF38BQ5VTL8 546 aaKnown RBP11.14□□□□□ -0.63
CTNNA1-229ENST00000521683 FAM83AQ86UY5 434 aa11.14□□□□□ -0.63
CTNNA1-229ENST00000521683 CDAN1Q8IWY9 1227 aa11.14□□□□□ -0.63
CTNNA1-229ENST00000521683 KLHDC4Q8TBB5 520 aa11.14□□□□□ -0.63
CTNNA1-229ENST00000521683 HOOK2Q96ED9 719 aa11.14□□□□□ -0.63
CTNNA1-229ENST00000521683 MS4A4AQ96JQ5 239 aa11.14□□□□□ -0.63
CTNNA1-229ENST00000521683 PTPN18Q99952 460 aa11.14□□□□□ -0.63
CTNNA1-229ENST00000521683 ELP3Q9H9T3 547 aa11.14□□□□□ -0.63
CTNNA1-229ENST00000521683 TMOD2Q9NZR1 351 aa11.14□□□□□ -0.63
CTNNA1-229ENST00000521683 FBXO3Q9UK99 471 aa11.14□□□□□ -0.63
CTNNA1-229ENST00000521683 TRIM17Q9Y577 477 aa11.14□□□□□ -0.63
CTNNA1-229ENST00000521683 KIAA0100Q14667 2235 aaKnown RBP11.13□□□□□ -0.63
CTNNA1-229ENST00000521683 SLC5A1P13866 664 aa11.13□□□□□ -0.63
CTNNA1-229ENST00000521683 GTF2A2P52657 109 aa11.13□□□□□ -0.63
CTNNA1-229ENST00000521683 APOBEC3HQ6NTF7 200 aaKnown RBP11.13□□□□□ -0.63
CTNNA1-229ENST00000521683 HHIPL2Q6UWX4 724 aa11.13□□□□□ -0.63
CTNNA1-229ENST00000521683 WDR66Q8TBY9 1149 aa11.13□□□□□ -0.63
CTNNA1-229ENST00000521683 LPIN2Q92539 896 aa11.13□□□□□ -0.63
CTNNA1-229ENST00000521683 SMC4Q9NTJ3 1288 aa11.13□□□□□ -0.63
CTNNA1-229ENST00000521683 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.13□□□□□ -0.63
CTNNA1-229ENST00000521683 CSADQ9Y600 493 aa11.13□□□□□ -0.63
CTNNA1-229ENST00000521683 MYH13Q9UKX3 1938 aa11.12□□□□□ -0.63
CTNNA1-229ENST00000521683 SPDYE5A6NIY4 337 aa11.12□□□□□ -0.63
CTNNA1-229ENST00000521683 ZBTB22O15209 634 aa11.12□□□□□ -0.63
CTNNA1-229ENST00000521683 CIAO1O76071 339 aa11.12□□□□□ -0.63
CTNNA1-229ENST00000521683 SP3Q02447 781 aa11.12□□□□□ -0.63
CTNNA1-229ENST00000521683 INTS3Q68E01 1043 aaKnown RBP11.12□□□□□ -0.63
CTNNA1-229ENST00000521683 TRMT2AQ8IZ69 625 aaKnown RBP11.12□□□□□ -0.63
CTNNA1-229ENST00000521683 CD99L2Q8TCZ2 262 aa11.12□□□□□ -0.63
CTNNA1-229ENST00000521683 BRI3BPQ8WY22 251 aa11.12□□□□□ -0.63
CTNNA1-229ENST00000521683 CCL15-CCL14A0A0B4J2E2 113 aa11.11□□□□□ -0.63
CTNNA1-229ENST00000521683 UBTFL1P0CB47 393 aaPredicted RBP11.11□□□□□ -0.63
CTNNA1-229ENST00000521683 CACNB3P54284 484 aa11.11□□□□□ -0.63
CTNNA1-229ENST00000521683 TAF1CQ15572 869 aaPredicted RBP11.11□□□□□ -0.63
CTNNA1-229ENST00000521683 CCL15Q16663 113 aa11.11□□□□□ -0.63
CTNNA1-229ENST00000521683 DCAF15Q66K64 600 aa11.11□□□□□ -0.63
CTNNA1-229ENST00000521683 ATG9AQ7Z3C6 839 aa11.11□□□□□ -0.63
CTNNA1-229ENST00000521683 ERO1BQ86YB8 467 aa11.11□□□□□ -0.63
CTNNA1-229ENST00000521683 EFCC1Q9HA90 598 aa11.11□□□□□ -0.63
CTNNA1-229ENST00000521683 ZCCHC17Q9NP64 241 aaKnown RBP11.11□□□□□ -0.63
CTNNA1-229ENST00000521683 HDAC5Q9UQL6 1122 aa11.11□□□□□ -0.63
CTNNA1-229ENST00000521683 PTPN22Q9Y2R2 807 aa11.11□□□□□ -0.63
CTNNA1-229ENST00000521683 SNCAIPQ9Y6H5 919 aa11.11□□□□□ -0.63
CTNNA1-229ENST00000521683 RBBP6Q7Z6E9 1792 aaKnown RBP11.11□□□□□ -0.63
CTNNA1-229ENST00000521683 CETPP11597 493 aa11.1□□□□□ -0.63
CTNNA1-229ENST00000521683 ARHGEF6Q15052 776 aa11.1□□□□□ -0.63
CTNNA1-229ENST00000521683 ATP2B3Q16720 1220 aa11.1□□□□□ -0.63
CTNNA1-229ENST00000521683 ARMC5Q96C12 935 aa11.1□□□□□ -0.63
CTNNA1-229ENST00000521683 OTUD5Q96G74 571 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms