RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 RSRP1Q9BUV0 290 aa10.61□□□□□ -0.71
NUDCD1-204ENST00000521439 TGIF2Q9GZN2 237 aa10.61□□□□□ -0.71
NUDCD1-204ENST00000521439 SRA1Q9HD15 236 aaKnown RBP10.61□□□□□ -0.71
NUDCD1-204ENST00000521439 GPN3Q9UHW5 284 aaPredicted RBP10.61□□□□□ -0.71
NUDCD1-204ENST00000521439 ENC1O14682 589 aa10.6□□□□□ -0.71
NUDCD1-204ENST00000521439 B3GALT4O96024 378 aa10.6□□□□□ -0.71
NUDCD1-204ENST00000521439 ESRRAP11474 423 aaPredicted RBP10.6□□□□□ -0.71
NUDCD1-204ENST00000521439 RLBP1P12271 317 aa10.6□□□□□ -0.71
NUDCD1-204ENST00000521439 USP48Q86UV5 1035 aa10.6□□□□□ -0.71
NUDCD1-204ENST00000521439 TMEM39AQ9NV64 488 aa10.6□□□□□ -0.71
NUDCD1-204ENST00000521439 PPME1Q9Y570 386 aa10.6□□□□□ -0.71
NUDCD1-204ENST00000521439 TTBK1Q5TCY1 1321 aaPredicted RBP10.59□□□□□ -0.71
NUDCD1-204ENST00000521439 H3BRJ5 948 aa10.59□□□□□ -0.71
NUDCD1-204ENST00000521439 CELA3AP09093 270 aa10.59□□□□□ -0.71
NUDCD1-204ENST00000521439 PPP2R3AQ06190 1150 aa10.59□□□□□ -0.71
NUDCD1-204ENST00000521439 IKBKEQ14164 716 aa10.59□□□□□ -0.71
NUDCD1-204ENST00000521439 ZNF394Q53GI3 561 aa10.59□□□□□ -0.71
NUDCD1-204ENST00000521439 TRIM56Q9BRZ2 755 aaKnown RBP10.59□□□□□ -0.71
NUDCD1-204ENST00000521439 DDX41Q9UJV9 622 aaKnown RBP10.59□□□□□ -0.71
NUDCD1-204ENST00000521439 SELPP16109 830 aa10.58□□□□□ -0.72
NUDCD1-204ENST00000521439 GATA4P43694 442 aa10.58□□□□□ -0.72
NUDCD1-204ENST00000521439 ZNF157P51786 506 aaPredicted RBP10.58□□□□□ -0.72
NUDCD1-204ENST00000521439 ZC3H6P61129 1189 aaKnown RBP10.58□□□□□ -0.72
NUDCD1-204ENST00000521439 PWP1Q13610 501 aa10.58□□□□□ -0.72
NUDCD1-204ENST00000521439 RELL1Q8IUW5 271 aa10.58□□□□□ -0.72
NUDCD1-204ENST00000521439 MAP4K3Q8IVH8 894 aa10.58□□□□□ -0.72
NUDCD1-204ENST00000521439 DCAF11Q8TEB1 546 aa10.58□□□□□ -0.72
NUDCD1-204ENST00000521439 LENG1Q96BZ8 264 aaPredicted RBP10.58□□□□□ -0.72
NUDCD1-204ENST00000521439 C8orf37Q96NL8 207 aa10.58□□□□□ -0.72
NUDCD1-204ENST00000521439 COPRSQ9NQ92 184 aa10.58□□□□□ -0.72
NUDCD1-204ENST00000521439 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.58□□□□□ -0.72
NUDCD1-204ENST00000521439 SOX1O00570 391 aaPredicted RBP10.57□□□□□ -0.72
NUDCD1-204ENST00000521439 NRG1Q02297 640 aaPredicted RBP10.57□□□□□ -0.72
NUDCD1-204ENST00000521439 ZNF654Q8IZM8 581 aa10.57□□□□□ -0.72
NUDCD1-204ENST00000521439 KBTBD4Q9NVX7 518 aa10.57□□□□□ -0.72
NUDCD1-204ENST00000521439 PCDHGB7Q9Y5F8 929 aa10.57□□□□□ -0.72
NUDCD1-204ENST00000521439 DEAF1O75398 565 aaPredicted RBP10.56□□□□□ -0.72
NUDCD1-204ENST00000521439 CDC25BP30305 580 aa10.56□□□□□ -0.72
NUDCD1-204ENST00000521439 RACK1P63244 317 aaKnown RBP10.56□□□□□ -0.72
NUDCD1-204ENST00000521439 MAP3K11Q16584 847 aa10.56□□□□□ -0.72
NUDCD1-204ENST00000521439 FAM117BQ6P1L5 589 aa10.56□□□□□ -0.72
NUDCD1-204ENST00000521439 CCSER2Q9H7U1 834 aa10.56□□□□□ -0.72
NUDCD1-204ENST00000521439 LINC01387J3KSC0 135 aa10.55□□□□□ -0.72
NUDCD1-204ENST00000521439 PAGE1O75459 146 aa10.55□□□□□ -0.72
NUDCD1-204ENST00000521439 LIG3P49916 1009 aa10.55□□□□□ -0.72
NUDCD1-204ENST00000521439 PIP4K2BP78356 416 aa10.55□□□□□ -0.72
NUDCD1-204ENST00000521439 ADGRE1Q14246 886 aa10.55□□□□□ -0.72
NUDCD1-204ENST00000521439 SHISA2Q6UWI4 295 aa10.55□□□□□ -0.72
NUDCD1-204ENST00000521439 DDX54Q8TDD1 881 aaKnown RBP10.55□□□□□ -0.72
NUDCD1-204ENST00000521439 SOX17Q9H6I2 414 aaPredicted RBP10.55□□□□□ -0.72
NUDCD1-204ENST00000521439 SAMM50Q9Y512 469 aa10.55□□□□□ -0.72
NUDCD1-204ENST00000521439 GBP2P32456 591 aaPredicted RBP10.54□□□□□ -0.72
NUDCD1-204ENST00000521439 ARL4DP49703 201 aa10.54□□□□□ -0.72
NUDCD1-204ENST00000521439 TTBK2Q6IQ55 1244 aa10.54□□□□□ -0.72
NUDCD1-204ENST00000521439 TXNDC11Q6PKC3 985 aa10.54□□□□□ -0.72
NUDCD1-204ENST00000521439 IGF2-ASQ6U949 168 aa10.54□□□□□ -0.72
NUDCD1-204ENST00000521439 WNT8BQ93098 351 aa10.54□□□□□ -0.72
NUDCD1-204ENST00000521439 TMEM74Q96NL1 305 aa10.54□□□□□ -0.72
NUDCD1-204ENST00000521439 ACBD3Q9H3P7 528 aa10.54□□□□□ -0.72
NUDCD1-204ENST00000521439 USP21Q9UK80 565 aa10.54□□□□□ -0.72
NUDCD1-204ENST00000521439 NME2P22392 152 aa10.53□□□□□ -0.72
NUDCD1-204ENST00000521439 MBTPS1Q14703 1052 aa10.53□□□□□ -0.72
NUDCD1-204ENST00000521439 SETDB1Q15047 1291 aa10.53□□□□□ -0.72
NUDCD1-204ENST00000521439 NAALADL2Q58DX5 795 aa10.53□□□□□ -0.72
NUDCD1-204ENST00000521439 PCNX4Q63HM2 1172 aa10.53□□□□□ -0.72
NUDCD1-204ENST00000521439 PHC3Q8NDX5 983 aa10.53□□□□□ -0.72
NUDCD1-204ENST00000521439 SLC7A3Q8WY07 619 aa10.53□□□□□ -0.72
NUDCD1-204ENST00000521439 OSGEPQ9NPF4 335 aa10.53□□□□□ -0.72
NUDCD1-204ENST00000521439 MINDY4BA8MYZ0 360 aa10.52□□□□□ -0.73
NUDCD1-204ENST00000521439 F6X3S4 739 aa10.52□□□□□ -0.73
NUDCD1-204ENST00000521439 DLL1O00548 723 aa10.52□□□□□ -0.73
NUDCD1-204ENST00000521439 FSCN2O14926 492 aa10.52□□□□□ -0.73
NUDCD1-204ENST00000521439 EIF4EBP3O60516 100 aaPredicted RBP10.52□□□□□ -0.73
NUDCD1-204ENST00000521439 BMP6P22004 513 aa10.52□□□□□ -0.73
NUDCD1-204ENST00000521439 RPS26P62854 115 aaKnown RBP10.52□□□□□ -0.73
NUDCD1-204ENST00000521439 C19orf57Q0VDD7 668 aa10.52□□□□□ -0.73
NUDCD1-204ENST00000521439 HGSNATQ68CP4 663 aa10.52□□□□□ -0.73
NUDCD1-204ENST00000521439 AGMOQ6ZNB7 445 aa10.52□□□□□ -0.73
NUDCD1-204ENST00000521439 GSTM4Q03013 218 aa10.51□□□□□ -0.73
NUDCD1-204ENST00000521439 TXNRD3Q86VQ6 643 aa10.51□□□□□ -0.73
NUDCD1-204ENST00000521439 SULF2Q8IWU5 870 aa10.51□□□□□ -0.73
NUDCD1-204ENST00000521439 TLR6Q9Y2C9 796 aa10.51□□□□□ -0.73
NUDCD1-204ENST00000521439 ARNTP27540 789 aa10.5□□□□□ -0.73
NUDCD1-204ENST00000521439 AP3B2Q13367 1082 aa10.5□□□□□ -0.73
NUDCD1-204ENST00000521439 RHOVQ96L33 236 aa10.5□□□□□ -0.73
NUDCD1-204ENST00000521439 EMILIN2Q9BXX0 1053 aa10.5□□□□□ -0.73
NUDCD1-204ENST00000521439 CAPN10Q9HC96 672 aa10.5□□□□□ -0.73
NUDCD1-204ENST00000521439 CYP8B1Q9UNU6 501 aa10.5□□□□□ -0.73
NUDCD1-204ENST00000521439 EIF4A3P38919 411 aaKnown RBP10.49□□□□□ -0.73
NUDCD1-204ENST00000521439 KLHL23Q8NBE8 558 aa10.49□□□□□ -0.73
NUDCD1-204ENST00000521439 STK35Q8TDR2 534 aa10.49□□□□□ -0.73
NUDCD1-204ENST00000521439 TINF2Q9BSI4 451 aa10.49□□□□□ -0.73
NUDCD1-204ENST00000521439 CARD10Q9BWT7 1032 aa10.49□□□□□ -0.73
NUDCD1-204ENST00000521439 MRPL18Q9H0U6 180 aaKnown RBP10.49□□□□□ -0.73
NUDCD1-204ENST00000521439 PF4P02776 101 aa10.48□□□□□ -0.73
NUDCD1-204ENST00000521439 TFE3P19532 575 aaPredicted RBP10.48□□□□□ -0.73
NUDCD1-204ENST00000521439 TNNI2P48788 182 aa10.48□□□□□ -0.73
NUDCD1-204ENST00000521439 LMNB2Q03252 620 aa10.48□□□□□ -0.73
NUDCD1-204ENST00000521439 CAMK2GQ13555 558 aaPredicted RBP10.48□□□□□ -0.73
NUDCD1-204ENST00000521439 LRRC14Q15048 493 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms