RNA–Protein interactions for RNA: ENST00000521067.1

PABPC1-217, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-217ENST00000521067 FKTNO75072 461 aa25.51■■□□□ 1.67
PABPC1-217ENST00000521067 BCAMP50895 628 aa25.51■■□□□ 1.67
PABPC1-217ENST00000521067 INHBEP58166 350 aa25.51■■□□□ 1.67
PABPC1-217ENST00000521067 CHAF1AQ13111 956 aaPredicted RBP25.5■■□□□ 1.67
PABPC1-217ENST00000521067 VPS37DQ86XT2 251 aa25.5■■□□□ 1.67
PABPC1-217ENST00000521067 TCP10L2B9ZVM9 353 aa25.49■■□□□ 1.67
PABPC1-217ENST00000521067 IREB2P48200 963 aaKnown RBP25.49■■□□□ 1.67
PABPC1-217ENST00000521067 RFX5P48382 616 aaPredicted RBP25.49■■□□□ 1.67
PABPC1-217ENST00000521067 TMEM39BQ9GZU3 492 aa25.49■■□□□ 1.67
PABPC1-217ENST00000521067 ECM29Q5VYK3 1845 aa25.49■■□□□ 1.67
PABPC1-217ENST00000521067 ALDH1A1P00352 501 aa25.48■■□□□ 1.67
PABPC1-217ENST00000521067 FGFR2P21802 821 aa25.48■■□□□ 1.67
PABPC1-217ENST00000521067 ANKRD13AQ8IZ07 590 aa25.48■■□□□ 1.67
PABPC1-217ENST00000521067 PTPN18Q99952 460 aa25.48■■□□□ 1.67
PABPC1-217ENST00000521067 TNFAIP1Q13829 316 aa25.47■■□□□ 1.67
PABPC1-217ENST00000521067 CAVIN4Q5BKX8 364 aa25.47■■□□□ 1.67
PABPC1-217ENST00000521067 TRMT2AQ8IZ69 625 aaKnown RBP25.47■■□□□ 1.67
PABPC1-217ENST00000521067 CACNB3P54284 484 aa25.46■■□□□ 1.67
PABPC1-217ENST00000521067 FBXO46Q6PJ61 603 aaPredicted RBP25.46■■□□□ 1.67
PABPC1-217ENST00000521067 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.46■■□□□ 1.67
PABPC1-217ENST00000521067 ELP3Q9H9T3 547 aa25.46■■□□□ 1.67
PABPC1-217ENST00000521067 CENPFP49454 3210 aa25.46■■□□□ 1.67
PABPC1-217ENST00000521067 PDE4DIPQ5VU43 2346 aa25.46■■□□□ 1.67
PABPC1-217ENST00000521067 FRAT2O75474 233 aaPredicted RBP25.45■■□□□ 1.66
PABPC1-217ENST00000521067 ALDH1L2Q3SY69 923 aa25.45■■□□□ 1.66
PABPC1-217ENST00000521067 TBC1D22AQ8WUA7 517 aa25.45■■□□□ 1.66
PABPC1-217ENST00000521067 CNKSR2Q8WXI2 1034 aa25.45■■□□□ 1.66
PABPC1-217ENST00000521067 TESPA1A2RU30 521 aaPredicted RBP25.44■■□□□ 1.66
PABPC1-217ENST00000521067 HDLBPQ00341 1268 aaKnown RBP25.44■■□□□ 1.66
PABPC1-217ENST00000521067 OPTNQ96CV9 577 aa25.44■■□□□ 1.66
PABPC1-217ENST00000521067 EYA2O00167 538 aa25.43■■□□□ 1.66
PABPC1-217ENST00000521067 PUM3Q15397 648 aaKnown RBP25.43■■□□□ 1.66
PABPC1-217ENST00000521067 APOBEC3HQ6NTF7 200 aaKnown RBP25.43■■□□□ 1.66
PABPC1-217ENST00000521067 ATG9AQ7Z3C6 839 aa25.43■■□□□ 1.66
PABPC1-217ENST00000521067 MS4A4AQ96JQ5 239 aa25.43■■□□□ 1.66
PABPC1-217ENST00000521067 CRHR2Q13324 411 aa25.42■■□□□ 1.66
PABPC1-217ENST00000521067 TEKT1Q969V4 418 aa25.42■■□□□ 1.66
PABPC1-217ENST00000521067 MRIQ9BWK5 157 aa25.42■■□□□ 1.66
PABPC1-217ENST00000521067 SMC4Q9NTJ3 1288 aa25.42■■□□□ 1.66
PABPC1-217ENST00000521067 MAP3K9P80192 1104 aa25.41■■□□□ 1.66
PABPC1-217ENST00000521067 CAP1Q01518 475 aa25.41■■□□□ 1.66
PABPC1-217ENST00000521067 ZDHHC15Q96MV8 337 aa25.41■■□□□ 1.66
PABPC1-217ENST00000521067 MKI67P46013 3256 aaKnown RBP25.41■■□□□ 1.66
PABPC1-217ENST00000521067 KIF16BQ96L93 1317 aa25.4■■□□□ 1.66
PABPC1-217ENST00000521067 IFIT1P09914 478 aaKnown RBP25.4■■□□□ 1.66
PABPC1-217ENST00000521067 TNNI2P48788 182 aa25.4■■□□□ 1.66
PABPC1-217ENST00000521067 VGLL4Q14135 290 aa25.4■■□□□ 1.66
PABPC1-217ENST00000521067 OTOP1Q7RTM1 612 aa25.4■■□□□ 1.66
PABPC1-217ENST00000521067 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.4■■□□□ 1.661e-323■■■□□ 15.3
PABPC1-217ENST00000521067 NOB1Q9ULX3 412 aaKnown RBP25.4■■□□□ 1.66
PABPC1-217ENST00000521067 TRIM17Q9Y577 477 aa25.4■■□□□ 1.66
PABPC1-217ENST00000521067 BRI3BPQ8WY22 251 aa25.39■■□□□ 1.66
PABPC1-217ENST00000521067 ARAP2Q8WZ64 1704 aa25.38■■□□□ 1.65
PABPC1-217ENST00000521067 SLC34A2O95436 690 aa25.38■■□□□ 1.65
PABPC1-217ENST00000521067 LPIN2Q92539 896 aa25.38■■□□□ 1.65
PABPC1-217ENST00000521067 SUGT1Q9Y2Z0 365 aa25.38■■□□□ 1.65
PABPC1-217ENST00000521067 OTUD7BQ6GQQ9 843 aa25.37■■□□□ 1.65
PABPC1-217ENST00000521067 CD99L2Q8TCZ2 262 aa25.37■■□□□ 1.65
PABPC1-217ENST00000521067 SIL1Q9H173 461 aa25.37■■□□□ 1.65
PABPC1-217ENST00000521067 SLC5A1P13866 664 aa25.36■■□□□ 1.65
PABPC1-217ENST00000521067 HHIPL2Q6UWX4 724 aa25.36■■□□□ 1.65
PABPC1-217ENST00000521067 FAM83AQ86UY5 434 aa25.36■■□□□ 1.65
PABPC1-217ENST00000521067 BRCA2P51587 3418 aa25.35■■□□□ 1.65
PABPC1-217ENST00000521067 OTOFQ9HC10 1997 aa25.35■■□□□ 1.65
PABPC1-217ENST00000521067 UBTFL1P0CB47 393 aaPredicted RBP25.35■■□□□ 1.65
PABPC1-217ENST00000521067 FKBP1CQ5VVH2 108 aa25.35■■□□□ 1.65
PABPC1-217ENST00000521067 LAMB1P07942 1786 aa25.35■■□□□ 1.65
PABPC1-217ENST00000521067 WDR66Q8TBY9 1149 aa25.34■■□□□ 1.65
PABPC1-217ENST00000521067 ZKSCAN4Q969J2 545 aaPredicted RBP25.34■■□□□ 1.65
PABPC1-217ENST00000521067 OTUD5Q96G74 571 aa25.34■■□□□ 1.65
PABPC1-217ENST00000521067 SNCAIPQ9Y6H5 919 aa25.34■■□□□ 1.65
PABPC1-217ENST00000521067 CCL15-CCL14A0A0B4J2E2 113 aa25.33■■□□□ 1.65
PABPC1-217ENST00000521067 SP3Q02447 781 aa25.33■■□□□ 1.65
PABPC1-217ENST00000521067 CCL15Q16663 113 aa25.33■■□□□ 1.65
PABPC1-217ENST00000521067 FAM43AQ8N2R8 423 aa25.33■■□□□ 1.65
PABPC1-217ENST00000521067 ERO1AQ96HE7 468 aa25.33■■□□□ 1.65
PABPC1-217ENST00000521067 PA2G4Q9UQ80 394 aaKnown RBP25.33■■□□□ 1.65
PABPC1-217ENST00000521067 PTPN22Q9Y2R2 807 aa25.33■■□□□ 1.65
PABPC1-217ENST00000521067 CSADQ9Y600 493 aa25.33■■□□□ 1.65
PABPC1-217ENST00000521067 LRRFIP2Q9Y608 721 aaKnown RBP25.33■■□□□ 1.65
PABPC1-217ENST00000521067 SPDYE5A6NIY4 337 aa25.32■■□□□ 1.64
PABPC1-217ENST00000521067 CIAO1O76071 339 aa25.32■■□□□ 1.64
PABPC1-217ENST00000521067 GTF2A2P52657 109 aa25.32■■□□□ 1.64
PABPC1-217ENST00000521067 DIXDC1Q155Q3 683 aa25.32■■□□□ 1.64
PABPC1-217ENST00000521067 ATP2B3Q16720 1220 aa25.32■■□□□ 1.64
PABPC1-217ENST00000521067 WRNIP1Q96S55 665 aa25.32■■□□□ 1.64
PABPC1-217ENST00000521067 TMOD2Q9NZR1 351 aa25.32■■□□□ 1.64
PABPC1-217ENST00000521067 CEP126Q9P2H0 1117 aa25.32■■□□□ 1.64
PABPC1-217ENST00000521067 MAST3O60307 1309 aa25.32■■□□□ 1.64
PABPC1-217ENST00000521067 CT47B1P0C2W7 299 aaPredicted RBP25.31■■□□□ 1.64
PABPC1-217ENST00000521067 PRDX5P30044 214 aa25.31■■□□□ 1.64
PABPC1-217ENST00000521067 MIGA2Q7L4E1 593 aa25.31■■□□□ 1.64
PABPC1-217ENST00000521067 FBXO3Q9UK99 471 aa25.31■■□□□ 1.64
PABPC1-217ENST00000521067 DAGLAQ9Y4D2 1042 aa25.31■■□□□ 1.64
PABPC1-217ENST00000521067 CDC42EP5Q6NZY7 148 aa25.3■■□□□ 1.64
PABPC1-217ENST00000521067 MEIS3Q99687 375 aa25.3■■□□□ 1.64
PABPC1-217ENST00000521067 API5Q9BZZ5 524 aaKnown RBP25.3■■□□□ 1.64
PABPC1-217ENST00000521067 EFCC1Q9HA90 598 aa25.3■■□□□ 1.64
PABPC1-217ENST00000521067 IRF6O14896 467 aa25.29■■□□□ 1.64
PABPC1-217ENST00000521067 PHKA1P46020 1223 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms