RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 MEIS3Q99687 375 aa19.74■□□□□ 0.75
CLN8-205ENST00000520991 CIAO1O76071 339 aa19.73■□□□□ 0.75
CLN8-205ENST00000520991 IREB2P48200 963 aaKnown RBP19.73■□□□□ 0.75
CLN8-205ENST00000520991 GRIK5Q16478 980 aa19.73■□□□□ 0.75
CLN8-205ENST00000520991 MAP3K11Q16584 847 aa19.73■□□□□ 0.75
CLN8-205ENST00000520991 SPRYD7Q5W111 196 aa19.73■□□□□ 0.75
CLN8-205ENST00000520991 ATG9AQ7Z3C6 839 aa19.73■□□□□ 0.75
CLN8-205ENST00000520991 TEKT1Q969V4 418 aa19.73■□□□□ 0.75
CLN8-205ENST00000520991 SLC10A4Q96EP9 437 aa19.73■□□□□ 0.75
CLN8-205ENST00000520991 CEP126Q9P2H0 1117 aa19.73■□□□□ 0.75
CLN8-205ENST00000520991 FBXO3Q9UK99 471 aa19.73■□□□□ 0.75
CLN8-205ENST00000520991 TCP10L2B9ZVM9 353 aa19.72■□□□□ 0.75
CLN8-205ENST00000520991 TM4SF4P48230 202 aa19.72■□□□□ 0.75
CLN8-205ENST00000520991 HDLBPQ00341 1268 aaKnown RBP19.72■□□□□ 0.75
CLN8-205ENST00000520991 MAST3O60307 1309 aa19.71■□□□□ 0.75
CLN8-205ENST00000520991 IPO8O15397 1037 aaKnown RBP19.71■□□□□ 0.75
CLN8-205ENST00000520991 GNAI3P08754 354 aa19.71■□□□□ 0.75
CLN8-205ENST00000520991 TNNI2P48788 182 aa19.71■□□□□ 0.75
CLN8-205ENST00000520991 ATP2B3Q16720 1220 aa19.71■□□□□ 0.75
CLN8-205ENST00000520991 INTS3Q68E01 1043 aaKnown RBP19.71■□□□□ 0.75
CLN8-205ENST00000520991 CLMNQ96JQ2 1002 aa19.71■□□□□ 0.75
CLN8-205ENST00000520991 SUGT1Q9Y2Z0 365 aa19.71■□□□□ 0.75
CLN8-205ENST00000520991 TBC1D8O95759 1140 aa19.7■□□□□ 0.74
CLN8-205ENST00000520991 IL15P40933 162 aaPredicted RBP19.7■□□□□ 0.74
CLN8-205ENST00000520991 WDR66Q8TBY9 1149 aa19.7■□□□□ 0.74
CLN8-205ENST00000520991 FRAT1Q92837 279 aaPredicted RBP19.7■□□□□ 0.74
CLN8-205ENST00000520991 PA2G4Q9UQ80 394 aaKnown RBP19.7■□□□□ 0.74
CLN8-205ENST00000520991 UNCXA6NJT0 531 aa19.69■□□□□ 0.74
CLN8-205ENST00000520991 WNK4Q96J92 1243 aa19.69■□□□□ 0.74
CLN8-205ENST00000520991 GNL3LQ9NVN8 582 aaKnown RBP19.69■□□□□ 0.74
CLN8-205ENST00000520991 TMOD2Q9NZR1 351 aa19.69■□□□□ 0.74
CLN8-205ENST00000520991 MYH13Q9UKX3 1938 aa19.69■□□□□ 0.74
CLN8-205ENST00000520991 MANSC4A6NHS7 340 aaPredicted RBP19.68■□□□□ 0.74
CLN8-205ENST00000520991 USP2O75604 605 aaPredicted RBP19.68■□□□□ 0.74
CLN8-205ENST00000520991 ZBTB48P10074 688 aaPredicted RBP19.68■□□□□ 0.74
CLN8-205ENST00000520991 TRIM27P14373 513 aa19.68■□□□□ 0.74
CLN8-205ENST00000520991 HNRNPUQ00839 825 aaKnown RBP eCLIP19.68■□□□□ 0.74
CLN8-205ENST00000520991 DIEXFQ68CQ4 756 aaKnown RBP19.68■□□□□ 0.74
CLN8-205ENST00000520991 ANKRD13AQ8IZ07 590 aa19.68■□□□□ 0.74
CLN8-205ENST00000520991 MIER1Q8N108 512 aa19.68■□□□□ 0.74
CLN8-205ENST00000520991 ZDHHC15Q96MV8 337 aa19.68■□□□□ 0.74
CLN8-205ENST00000520991 TMEM39BQ9GZU3 492 aa19.68■□□□□ 0.74
CLN8-205ENST00000520991 COPRSQ9NQ92 184 aa19.68■□□□□ 0.74
CLN8-205ENST00000520991 BCAR3O75815 825 aa19.67■□□□□ 0.74
CLN8-205ENST00000520991 ATF7IPQ6VMQ6 1270 aa19.67■□□□□ 0.74
CLN8-205ENST00000520991 CTU1Q7Z7A3 348 aaKnown RBP19.67■□□□□ 0.74
CLN8-205ENST00000520991 MRIQ9BWK5 157 aa19.67■□□□□ 0.74
CLN8-205ENST00000520991 SRGAP3O43295 1099 aa19.66■□□□□ 0.74
CLN8-205ENST00000520991 ALDH1A1P00352 501 aa19.66■□□□□ 0.74
CLN8-205ENST00000520991 CACNB3P54284 484 aa19.66■□□□□ 0.74
CLN8-205ENST00000520991 INHBEP58166 350 aa19.66■□□□□ 0.74
CLN8-205ENST00000520991 CDAN1Q8IWY9 1227 aa19.66■□□□□ 0.74
CLN8-205ENST00000520991 ZNF296Q8WUU4 475 aaPredicted RBP19.66■□□□□ 0.74
CLN8-205ENST00000520991 TEPSINQ96N21 525 aa19.66■□□□□ 0.74
CLN8-205ENST00000520991 HHIPL2Q6UWX4 724 aa19.65■□□□□ 0.74
CLN8-205ENST00000520991 CLUAP1Q96AJ1 413 aa19.65■□□□□ 0.74
CLN8-205ENST00000520991 GPR25O00155 361 aa19.64■□□□□ 0.73
CLN8-205ENST00000520991 APOBEC3HQ6NTF7 200 aaKnown RBP19.64■□□□□ 0.73
CLN8-205ENST00000520991 ELP3Q9H9T3 547 aa19.64■□□□□ 0.73
CLN8-205ENST00000520991 DENND2AQ9ULE3 1009 aa19.64■□□□□ 0.73
CLN8-205ENST00000520991 TNNQ9UQP3 1299 aa19.64■□□□□ 0.73
CLN8-205ENST00000520991 OTOFQ9HC10 1997 aa19.64■□□□□ 0.73
CLN8-205ENST00000520991 SEMA3EO15041 775 aa19.63■□□□□ 0.73
CLN8-205ENST00000520991 GNAI2P04899 355 aa19.63■□□□□ 0.73
CLN8-205ENST00000520991 PHKA1P46020 1223 aa19.63■□□□□ 0.73
CLN8-205ENST00000520991 NOM1Q5C9Z4 860 aaKnown RBP19.63■□□□□ 0.73
CLN8-205ENST00000520991 IFNL1Q8IU54 200 aa19.63■□□□□ 0.73
CLN8-205ENST00000520991 CFHR5Q9BXR6 569 aa19.63■□□□□ 0.73
CLN8-205ENST00000520991 LDHBP07195 334 aaKnown RBP19.62■□□□□ 0.73
CLN8-205ENST00000520991 PRDX5P30044 214 aa19.62■□□□□ 0.73
CLN8-205ENST00000520991 ADORA1P30542 326 aa19.62■□□□□ 0.73
CLN8-205ENST00000520991 GJA5P36382 358 aa19.62■□□□□ 0.73
CLN8-205ENST00000520991 MTX1Q13505 466 aa19.62■□□□□ 0.73
CLN8-205ENST00000520991 FKBP1CQ5VVH2 108 aa19.62■□□□□ 0.73
CLN8-205ENST00000520991 FAM83AQ86UY5 434 aa19.62■□□□□ 0.73
CLN8-205ENST00000520991 OPTNQ96CV9 577 aa19.62■□□□□ 0.73
CLN8-205ENST00000520991 HOOK2Q96ED9 719 aa19.62■□□□□ 0.73
CLN8-205ENST00000520991 CSADQ9Y600 493 aa19.62■□□□□ 0.73
CLN8-205ENST00000520991 FKTNO75072 461 aa19.61■□□□□ 0.73
CLN8-205ENST00000520991 MAP3K9P80192 1104 aa19.61■□□□□ 0.73
CLN8-205ENST00000520991 VGLL4Q14135 290 aa19.61■□□□□ 0.73
CLN8-205ENST00000520991 DIXDC1Q155Q3 683 aa19.61■□□□□ 0.73
CLN8-205ENST00000520991 ZKSCAN2Q63HK3 967 aa19.61■□□□□ 0.73
CLN8-205ENST00000520991 CCDC102BQ68D86 513 aa19.61■□□□□ 0.73
CLN8-205ENST00000520991 OTUD7BQ6GQQ9 843 aa19.61■□□□□ 0.73
CLN8-205ENST00000520991 AKAP2Q9Y2D5 859 aa19.61■□□□□ 0.73
CLN8-205ENST00000520991 LAMB1P07942 1786 aa19.6■□□□□ 0.73
CLN8-205ENST00000520991 SALL1Q9NSC2 1324 aa19.6■□□□□ 0.73
CLN8-205ENST00000520991 IGF2BP3O00425 579 aaKnown RBP eCLIP19.6■□□□□ 0.73
CLN8-205ENST00000520991 TFCP2Q12800 502 aa19.6■□□□□ 0.73
CLN8-205ENST00000520991 PKN2Q16513 984 aaKnown RBP19.6■□□□□ 0.73
CLN8-205ENST00000520991 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.6■□□□□ 0.73
CLN8-205ENST00000520991 ZGPATQ8N5A5 531 aaKnown RBP19.6■□□□□ 0.73
CLN8-205ENST00000520991 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.6■□□□□ 0.73
CLN8-205ENST00000520991 R3HDMLQ9H3Y0 253 aa19.6■□□□□ 0.73
CLN8-205ENST00000520991 DAGLAQ9Y4D2 1042 aa19.6■□□□□ 0.73
CLN8-205ENST00000520991 A0A1B0GUL7 405 aa19.59■□□□□ 0.73
CLN8-205ENST00000520991 TIMM10P62072 90 aa19.59■□□□□ 0.73
CLN8-205ENST00000520991 TMEM57Q8N5G2 664 aa19.59■□□□□ 0.73
CLN8-205ENST00000520991 RPAP1Q9BWH6 1393 aaPredicted RBP19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms