RNA–Protein interactions for RNA: ENST00000520913.1

PVT1-209, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 584 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-209ENST00000520913 MIER1Q8N108 512 aa13.38□□□□□ -0.27
PVT1-209ENST00000520913 RNF186Q9NXI6 227 aa13.38□□□□□ -0.27
PVT1-209ENST00000520913 PPP1R12BO60237 982 aaPredicted RBP13.37□□□□□ -0.27
PVT1-209ENST00000520913 TRPA1O75762 1119 aa13.37□□□□□ -0.27
PVT1-209ENST00000520913 TRIM27P14373 513 aa13.37□□□□□ -0.27
PVT1-209ENST00000520913 IL15P40933 162 aaPredicted RBP13.37□□□□□ -0.27
PVT1-209ENST00000520913 TNNI2P48788 182 aa13.37□□□□□ -0.27
PVT1-209ENST00000520913 HDLBPQ00341 1268 aaKnown RBP13.37□□□□□ -0.27
PVT1-209ENST00000520913 SREBF2Q12772 1141 aa13.37□□□□□ -0.27
PVT1-209ENST00000520913 MAP3K11Q16584 847 aa13.37□□□□□ -0.27
PVT1-209ENST00000520913 ATP2B3Q16720 1220 aa13.37□□□□□ -0.27
PVT1-209ENST00000520913 SUPT20HL1Q3ZLR7 823 aa13.37□□□□□ -0.27
PVT1-209ENST00000520913 ATF7IPQ6VMQ6 1270 aa13.37□□□□□ -0.27
PVT1-209ENST00000520913 DZIP1LQ8IYY4 767 aaKnown RBP13.37□□□□□ -0.27
PVT1-209ENST00000520913 FRAT1Q92837 279 aaPredicted RBP13.37□□□□□ -0.27
PVT1-209ENST00000520913 TEKT1Q969V4 418 aa13.37□□□□□ -0.27
PVT1-209ENST00000520913 ABHD8Q96I13 439 aa13.37□□□□□ -0.27
PVT1-209ENST00000520913 ZNF70Q9UC06 446 aaPredicted RBP13.37□□□□□ -0.27
PVT1-209ENST00000520913 SUGT1Q9Y2Z0 365 aa13.37□□□□□ -0.27
PVT1-209ENST00000520913 UNCXA6NJT0 531 aa13.36□□□□□ -0.27
PVT1-209ENST00000520913 RASA3Q14644 834 aa13.36□□□□□ -0.27
PVT1-209ENST00000520913 GRIK5Q16478 980 aa13.36□□□□□ -0.27
PVT1-209ENST00000520913 LDLRAD1Q5T700 205 aa13.36□□□□□ -0.27
PVT1-209ENST00000520913 TDRD3Q9H7E2 651 aaKnown RBP13.36□□□□□ -0.27
PVT1-209ENST00000520913 COPRSQ9NQ92 184 aa13.36□□□□□ -0.27
PVT1-209ENST00000520913 CEP126Q9P2H0 1117 aa13.36□□□□□ -0.27
PVT1-209ENST00000520913 RPAP1Q9BWH6 1393 aaPredicted RBP13.35□□□□□ -0.27
PVT1-209ENST00000520913 BCAR3O75815 825 aa13.35□□□□□ -0.27
PVT1-209ENST00000520913 IREB2P48200 963 aaKnown RBP13.35□□□□□ -0.27
PVT1-209ENST00000520913 MTX1Q13505 466 aa13.35□□□□□ -0.27
PVT1-209ENST00000520913 NBPF12Q5TAG4 269 aaPredicted RBP13.35□□□□□ -0.27
PVT1-209ENST00000520913 WDR66Q8TBY9 1149 aa13.35□□□□□ -0.27
PVT1-209ENST00000520913 TMOD2Q9NZR1 351 aa13.35□□□□□ -0.27
PVT1-209ENST00000520913 FZD1Q9UP38 647 aa13.35□□□□□ -0.27
PVT1-209ENST00000520913 PA2G4Q9UQ80 394 aaKnown RBP13.35□□□□□ -0.27
PVT1-209ENST00000520913 SRGAP3O43295 1099 aa13.34□□□□□ -0.27
PVT1-209ENST00000520913 ZBTB48P10074 688 aaPredicted RBP13.34□□□□□ -0.27
PVT1-209ENST00000520913 MKRN3Q13064 507 aaKnown RBP13.34□□□□□ -0.27
PVT1-209ENST00000520913 DGKZQ13574 1117 aa13.34□□□□□ -0.27
PVT1-209ENST00000520913 SPRYD7Q5W111 196 aa13.34□□□□□ -0.27
PVT1-209ENST00000520913 ZDHHC15Q96MV8 337 aa13.34□□□□□ -0.27
PVT1-209ENST00000520913 MCOLN1Q9GZU1 580 aa13.34□□□□□ -0.27
PVT1-209ENST00000520913 GNL3LQ9NVN8 582 aaKnown RBP13.34□□□□□ -0.27
PVT1-209ENST00000520913 ZBED9Q6R2W3 1325 aa13.34□□□□□ -0.27
PVT1-209ENST00000520913 CDK5RAP2Q96SN8 1893 aa13.33□□□□□ -0.27
PVT1-209ENST00000520913 MYO5AQ9Y4I1 1855 aaKnown RBP13.33□□□□□ -0.27
PVT1-209ENST00000520913 MANSC4A6NHS7 340 aaPredicted RBP13.33□□□□□ -0.28
PVT1-209ENST00000520913 TCP10L2B9ZVM9 353 aa13.33□□□□□ -0.28
PVT1-209ENST00000520913 SEMA3EO15041 775 aa13.33□□□□□ -0.28
PVT1-209ENST00000520913 GNAI2P04899 355 aa13.33□□□□□ -0.28
PVT1-209ENST00000520913 TM4SF4P48230 202 aa13.33□□□□□ -0.28
PVT1-209ENST00000520913 ZKSCAN2Q63HK3 967 aa13.33□□□□□ -0.28
PVT1-209ENST00000520913 ANKRD13AQ8IZ07 590 aa13.33□□□□□ -0.28
PVT1-209ENST00000520913 CLUAP1Q96AJ1 413 aa13.33□□□□□ -0.28
PVT1-209ENST00000520913 WNK4Q96J92 1243 aa13.33□□□□□ -0.28
PVT1-209ENST00000520913 MRIQ9BWK5 157 aa13.33□□□□□ -0.28
PVT1-209ENST00000520913 TNNQ9UQP3 1299 aa13.33□□□□□ -0.28
PVT1-209ENST00000520913 FOCADQ5VW36 1801 aa13.33□□□□□ -0.28
PVT1-209ENST00000520913 DOCK1Q14185 1865 aa13.33□□□□□ -0.28
PVT1-209ENST00000520913 SALL1Q9NSC2 1324 aa13.33□□□□□ -0.28
PVT1-209ENST00000520913 ATAD5Q96QE3 1844 aa13.32□□□□□ -0.28
PVT1-209ENST00000520913 ZBTB22O15209 634 aa13.32□□□□□ -0.28
PVT1-209ENST00000520913 TNRC18O15417 2968 aaPredicted RBP13.32□□□□□ -0.28
PVT1-209ENST00000520913 HHIPL2Q6UWX4 724 aa13.32□□□□□ -0.28
PVT1-209ENST00000520913 SLC10A4Q96EP9 437 aa13.32□□□□□ -0.28
PVT1-209ENST00000520913 CLMNQ96JQ2 1002 aa13.32□□□□□ -0.28
PVT1-209ENST00000520913 TEPSINQ96N21 525 aa13.32□□□□□ -0.28
PVT1-209ENST00000520913 TMEM39BQ9GZU3 492 aa13.32□□□□□ -0.28
PVT1-209ENST00000520913 DENND2AQ9ULE3 1009 aa13.32□□□□□ -0.28
PVT1-209ENST00000520913 USP2O75604 605 aaPredicted RBP13.31□□□□□ -0.28
PVT1-209ENST00000520913 PRDX5P30044 214 aa13.31□□□□□ -0.28
PVT1-209ENST00000520913 PHKA1P46020 1223 aa13.31□□□□□ -0.28
PVT1-209ENST00000520913 FKBP1CQ5VVH2 108 aa13.31□□□□□ -0.28
PVT1-209ENST00000520913 FAM83AQ86UY5 434 aa13.31□□□□□ -0.28
PVT1-209ENST00000520913 CDAN1Q8IWY9 1227 aa13.31□□□□□ -0.28
PVT1-209ENST00000520913 FTSJ3Q8IY81 847 aaKnown RBP13.31□□□□□ -0.28
PVT1-209ENST00000520913 ZGPATQ8N5A5 531 aaKnown RBP13.31□□□□□ -0.28
PVT1-209ENST00000520913 TMEM57Q8N5G2 664 aa13.31□□□□□ -0.28
PVT1-209ENST00000520913 CFHR5Q9BXR6 569 aa13.31□□□□□ -0.28
PVT1-209ENST00000520913 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.31□□□□□ -0.28
PVT1-209ENST00000520913 AKAP2Q9Y2D5 859 aa13.31□□□□□ -0.28
PVT1-209ENST00000520913 PDS5AQ29RF7 1337 aaKnown RBP13.31□□□□□ -0.28
PVT1-209ENST00000520913 PTPRFP10586 1907 aa13.31□□□□□ -0.28
PVT1-209ENST00000520913 HTTP42858 3142 aa13.3□□□□□ -0.28
PVT1-209ENST00000520913 A0A1B0GUL7 405 aa13.3□□□□□ -0.28
PVT1-209ENST00000520913 ALDH1A1P00352 501 aa13.3□□□□□ -0.28
PVT1-209ENST00000520913 LDHBP07195 334 aaKnown RBP13.3□□□□□ -0.28
PVT1-209ENST00000520913 ADORA1P30542 326 aa13.3□□□□□ -0.28
PVT1-209ENST00000520913 CACNB3P54284 484 aa13.3□□□□□ -0.28
PVT1-209ENST00000520913 INHBEP58166 350 aa13.3□□□□□ -0.28
PVT1-209ENST00000520913 NOM1Q5C9Z4 860 aaKnown RBP13.3□□□□□ -0.28
PVT1-209ENST00000520913 CCDC102BQ68D86 513 aa13.3□□□□□ -0.28
PVT1-209ENST00000520913 APOBEC3HQ6NTF7 200 aaKnown RBP13.3□□□□□ -0.28
PVT1-209ENST00000520913 CTU1Q7Z7A3 348 aaKnown RBP13.3□□□□□ -0.28
PVT1-209ENST00000520913 HOOK2Q96ED9 719 aa13.3□□□□□ -0.28
PVT1-209ENST00000520913 CCDC85CA6NKD9 419 aa13.29□□□□□ -0.28
PVT1-209ENST00000520913 TBC1D8O95759 1140 aa13.29□□□□□ -0.28
PVT1-209ENST00000520913 TFCP2Q12800 502 aa13.29□□□□□ -0.28
PVT1-209ENST00000520913 MVPQ14764 893 aaKnown RBP13.29□□□□□ -0.28
PVT1-209ENST00000520913 ELP3Q9H9T3 547 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms