RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 USP2O75604 605 aaPredicted RBP24.61■■□□□ 1.53
PABPC1-215ENST00000520804 CT47B1P0C2W7 299 aaPredicted RBP24.61■■□□□ 1.53
PABPC1-215ENST00000520804 FGFR2P21802 821 aa24.61■■□□□ 1.53
PABPC1-215ENST00000520804 IREB2P48200 963 aaKnown RBP24.61■■□□□ 1.53
PABPC1-215ENST00000520804 BCAMP50895 628 aa24.61■■□□□ 1.53
PABPC1-215ENST00000520804 INHBEP58166 350 aa24.61■■□□□ 1.53
PABPC1-215ENST00000520804 PUM3Q15397 648 aaKnown RBP24.61■■□□□ 1.53
PABPC1-215ENST00000520804 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.61■■□□□ 1.53
PABPC1-215ENST00000520804 LAMB1P07942 1786 aa24.6■■□□□ 1.53
PABPC1-215ENST00000520804 EYA2O00167 538 aa24.6■■□□□ 1.53
PABPC1-215ENST00000520804 HDLBPQ00341 1268 aaKnown RBP24.6■■□□□ 1.53
PABPC1-215ENST00000520804 ALDH1A1P00352 501 aa24.59■■□□□ 1.53
PABPC1-215ENST00000520804 IFIT1P09914 478 aaKnown RBP24.59■■□□□ 1.53
PABPC1-215ENST00000520804 PKN2Q16513 984 aaKnown RBP24.59■■□□□ 1.53
PABPC1-215ENST00000520804 ANKRD13AQ8IZ07 590 aa24.59■■□□□ 1.53
PABPC1-215ENST00000520804 TEPSINQ96N21 525 aa24.59■■□□□ 1.53
PABPC1-215ENST00000520804 NOB1Q9ULX3 412 aaKnown RBP24.59■■□□□ 1.53
PABPC1-215ENST00000520804 IFNL1Q8IU54 200 aa24.58■■□□□ 1.53
PABPC1-215ENST00000520804 R3HDMLQ9H3Y0 253 aa24.58■■□□□ 1.53
PABPC1-215ENST00000520804 TCP10L2B9ZVM9 353 aa24.57■■□□□ 1.52
PABPC1-215ENST00000520804 CCER2I3L3R5 266 aa24.57■■□□□ 1.52
PABPC1-215ENST00000520804 UBTFL1P0CB47 393 aaPredicted RBP24.57■■□□□ 1.52
PABPC1-215ENST00000520804 TNNI2P48788 182 aa24.57■■□□□ 1.52
PABPC1-215ENST00000520804 CDAN1Q8IWY9 1227 aa24.57■■□□□ 1.52
PABPC1-215ENST00000520804 TEKT1Q969V4 418 aa24.57■■□□□ 1.52
PABPC1-215ENST00000520804 MRIQ9BWK5 157 aa24.57■■□□□ 1.52
PABPC1-215ENST00000520804 FKTNO75072 461 aa24.56■■□□□ 1.52
PABPC1-215ENST00000520804 ATG9AQ7Z3C6 839 aa24.56■■□□□ 1.52
PABPC1-215ENST00000520804 LPIN2Q92539 896 aa24.56■■□□□ 1.52
PABPC1-215ENST00000520804 API5Q9BZZ5 524 aaKnown RBP24.56■■□□□ 1.52
PABPC1-215ENST00000520804 TMEM39BQ9GZU3 492 aa24.56■■□□□ 1.52
PABPC1-215ENST00000520804 HPS5Q9UPZ3 1129 aa24.56■■□□□ 1.52
PABPC1-215ENST00000520804 SUGT1Q9Y2Z0 365 aa24.56■■□□□ 1.52
PABPC1-215ENST00000520804 OTOFQ9HC10 1997 aa24.56■■□□□ 1.52
PABPC1-215ENST00000520804 SLC5A1P13866 664 aa24.55■■□□□ 1.52
PABPC1-215ENST00000520804 GJA5P36382 358 aa24.55■■□□□ 1.52
PABPC1-215ENST00000520804 ZDHHC15Q96MV8 337 aa24.55■■□□□ 1.52
PABPC1-215ENST00000520804 FBXO3Q9UK99 471 aa24.55■■□□□ 1.52
PABPC1-215ENST00000520804 IGF2BP3O00425 579 aaKnown RBP eCLIP24.54■■□□□ 1.528e-17■■■□□ 18
PABPC1-215ENST00000520804 MAST3O60307 1309 aa24.54■■□□□ 1.52
PABPC1-215ENST00000520804 CIAO1O76071 339 aa24.53■■□□□ 1.52
PABPC1-215ENST00000520804 SOX10P56693 466 aa24.53■■□□□ 1.52
PABPC1-215ENST00000520804 ELP3Q9H9T3 547 aa24.53■■□□□ 1.52
PABPC1-215ENST00000520804 APOBEC3HQ6NTF7 200 aaKnown RBP24.52■■□□□ 1.52
PABPC1-215ENST00000520804 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.52■■□□□ 1.52
PABPC1-215ENST00000520804 OPTNQ96CV9 577 aa24.52■■□□□ 1.52
PABPC1-215ENST00000520804 SIL1Q9H173 461 aa24.52■■□□□ 1.52
PABPC1-215ENST00000520804 HDAC5Q9UQL6 1122 aa24.52■■□□□ 1.52
PABPC1-215ENST00000520804 MYH13Q9UKX3 1938 aa24.51■■□□□ 1.51
PABPC1-215ENST00000520804 TESPA1A2RU30 521 aaPredicted RBP24.51■■□□□ 1.51
PABPC1-215ENST00000520804 RARSP54136 660 aaKnown RBP24.51■■□□□ 1.51
PABPC1-215ENST00000520804 CACNB3P54284 484 aa24.51■■□□□ 1.51
PABPC1-215ENST00000520804 FBXO46Q6PJ61 603 aaPredicted RBP24.51■■□□□ 1.51
PABPC1-215ENST00000520804 HHIPL2Q6UWX4 724 aa24.51■■□□□ 1.51
PABPC1-215ENST00000520804 WDR66Q8TBY9 1149 aa24.51■■□□□ 1.51
PABPC1-215ENST00000520804 LRRFIP2Q9Y608 721 aaKnown RBP24.51■■□□□ 1.51
PABPC1-215ENST00000520804 MAP3K9P80192 1104 aa24.5■■□□□ 1.51
PABPC1-215ENST00000520804 FKBP1CQ5VVH2 108 aa24.5■■□□□ 1.51
PABPC1-215ENST00000520804 OTUD7BQ6GQQ9 843 aa24.5■■□□□ 1.51
PABPC1-215ENST00000520804 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.5■■□□□ 1.511e-323■■■□□ 15.3
PABPC1-215ENST00000520804 TMOD2Q9NZR1 351 aa24.5■■□□□ 1.51
PABPC1-215ENST00000520804 CEP126Q9P2H0 1117 aa24.5■■□□□ 1.51
PABPC1-215ENST00000520804 VGLL4Q14135 290 aa24.49■■□□□ 1.51
PABPC1-215ENST00000520804 ATP2B3Q16720 1220 aa24.49■■□□□ 1.51
PABPC1-215ENST00000520804 FAM83AQ86UY5 434 aa24.49■■□□□ 1.51
PABPC1-215ENST00000520804 PTPN18Q99952 460 aa24.49■■□□□ 1.51
PABPC1-215ENST00000520804 IL15P40933 162 aaPredicted RBP24.48■■□□□ 1.51
PABPC1-215ENST00000520804 ARHGAP45Q92619 1136 aa24.48■■□□□ 1.51
PABPC1-215ENST00000520804 MEIS3Q99687 375 aa24.48■■□□□ 1.51
PABPC1-215ENST00000520804 CRHR2Q13324 411 aa24.47■■□□□ 1.51
PABPC1-215ENST00000520804 CNKSR2Q8WXI2 1034 aa24.47■■□□□ 1.51
PABPC1-215ENST00000520804 MS4A4AQ96JQ5 239 aa24.47■■□□□ 1.51
PABPC1-215ENST00000520804 CSADQ9Y600 493 aa24.47■■□□□ 1.51
PABPC1-215ENST00000520804 INTS3Q68E01 1043 aaKnown RBP24.46■■□□□ 1.51
PABPC1-215ENST00000520804 COPRSQ9NQ92 184 aa24.46■■□□□ 1.51
PABPC1-215ENST00000520804 GNL3LQ9NVN8 582 aaKnown RBP24.46■■□□□ 1.51
PABPC1-215ENST00000520804 PA2G4Q9UQ80 394 aaKnown RBP24.46■■□□□ 1.51
PABPC1-215ENST00000520804 HOOK2Q96ED9 719 aa24.45■■□□□ 1.5
PABPC1-215ENST00000520804 RPAP1Q9BWH6 1393 aaPredicted RBP24.44■■□□□ 1.5
PABPC1-215ENST00000520804 DAGLAQ9Y4D2 1042 aa24.44■■□□□ 1.5
PABPC1-215ENST00000520804 TRIM17Q9Y577 477 aa24.44■■□□□ 1.5
PABPC1-215ENST00000520804 SALL1Q9NSC2 1324 aa24.43■■□□□ 1.5
PABPC1-215ENST00000520804 SPDYE5A6NIY4 337 aa24.43■■□□□ 1.5
PABPC1-215ENST00000520804 SEMA3EO15041 775 aa24.43■■□□□ 1.5
PABPC1-215ENST00000520804 PRDX5P30044 214 aa24.43■■□□□ 1.5
PABPC1-215ENST00000520804 PHKA1P46020 1223 aa24.43■■□□□ 1.5
PABPC1-215ENST00000520804 GTF2A2P52657 109 aa24.43■■□□□ 1.5
PABPC1-215ENST00000520804 OTOP1Q7RTM1 612 aa24.43■■□□□ 1.5
PABPC1-215ENST00000520804 BRI3BPQ8WY22 251 aa24.43■■□□□ 1.5
PABPC1-215ENST00000520804 OTUD5Q96G74 571 aa24.43■■□□□ 1.5
PABPC1-215ENST00000520804 ERO1AQ96HE7 468 aa24.43■■□□□ 1.5
PABPC1-215ENST00000520804 DENND2AQ9ULE3 1009 aa24.43■■□□□ 1.5
PABPC1-215ENST00000520804 SNCAIPQ9Y6H5 919 aa24.43■■□□□ 1.5
PABPC1-215ENST00000520804 CCL15-CCL14A0A0B4J2E2 113 aa24.42■■□□□ 1.5
PABPC1-215ENST00000520804 ZBTB22O15209 634 aa24.42■■□□□ 1.5
PABPC1-215ENST00000520804 GNAI3P08754 354 aa24.42■■□□□ 1.5
PABPC1-215ENST00000520804 DIXDC1Q155Q3 683 aa24.42■■□□□ 1.5
PABPC1-215ENST00000520804 CCL15Q16663 113 aa24.42■■□□□ 1.5
PABPC1-215ENST00000520804 WRNIP1Q96S55 665 aa24.42■■□□□ 1.5
PABPC1-215ENST00000520804 LDHBP07195 334 aaKnown RBP24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 299.9 ms