RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 CHGBP05060 677 aa10.75□□□□□ -0.69
CSMD1-208ENST00000520561 FKBP1AP62942 108 aaKnown RBP10.75□□□□□ -0.69
CSMD1-208ENST00000520561 MECOMQ03112 1051 aa10.75□□□□□ -0.69
CSMD1-208ENST00000520561 USP17L1Q7RTZ2 530 aa10.75□□□□□ -0.69
CSMD1-208ENST00000520561 ZNF589Q86UQ0 364 aaPredicted RBP10.75□□□□□ -0.69
CSMD1-208ENST00000520561 SLF2Q8IX21 1173 aa10.75□□□□□ -0.69
CSMD1-208ENST00000520561 OSBP2Q969R2 916 aa10.75□□□□□ -0.69
CSMD1-208ENST00000520561 AIDAQ96BJ3 306 aa10.75□□□□□ -0.69
CSMD1-208ENST00000520561 NSUN4Q96CB9 384 aaKnown RBP10.75□□□□□ -0.69
CSMD1-208ENST00000520561 IL25Q9H293 177 aa10.75□□□□□ -0.69
CSMD1-208ENST00000520561 TSHZ2Q9NRE2 1034 aa10.75□□□□□ -0.69
CSMD1-208ENST00000520561 MYO3BQ8WXR4 1341 aa10.75□□□□□ -0.69
CSMD1-208ENST00000520561 COL4A5P29400 1685 aa10.75□□□□□ -0.69
CSMD1-208ENST00000520561 ZNF646O15015 1829 aaPredicted RBP10.74□□□□□ -0.69
CSMD1-208ENST00000520561 M0R2C6 588 aa10.74□□□□□ -0.69
CSMD1-208ENST00000520561 GPAA1O43292 621 aa10.74□□□□□ -0.69
CSMD1-208ENST00000520561 LDHCP07864 332 aa10.74□□□□□ -0.69
CSMD1-208ENST00000520561 SLFNL1Q499Z3 407 aa10.74□□□□□ -0.69
CSMD1-208ENST00000520561 CCDC129Q6ZRS4 1044 aa10.74□□□□□ -0.69
CSMD1-208ENST00000520561 ARHGAP27Q6ZUM4 889 aa10.74□□□□□ -0.69
CSMD1-208ENST00000520561 SEC62Q99442 399 aaKnown RBP10.74□□□□□ -0.69
CSMD1-208ENST00000520561 NOL10Q9BSC4 688 aaKnown RBP10.74□□□□□ -0.69
CSMD1-208ENST00000520561 C22orf23Q9BZE7 217 aa10.74□□□□□ -0.69
CSMD1-208ENST00000520561 PUS7LQ9H0K6 701 aaKnown RBP10.74□□□□□ -0.69
CSMD1-208ENST00000520561 ZNRF3Q9ULT6 936 aa10.74□□□□□ -0.69
CSMD1-208ENST00000520561 MROH7-TTC4A0A0A0MT08 1334 aa10.74□□□□□ -0.69
CSMD1-208ENST00000520561 CHD4Q14839 1912 aa10.74□□□□□ -0.69
CSMD1-208ENST00000520561 SCN9AQ15858 1988 aa10.74□□□□□ -0.69
CSMD1-208ENST00000520561 MAGEB6P1A0A0J9YX57 407 aa10.73□□□□□ -0.69
CSMD1-208ENST00000520561 YDJCA8MPS7 323 aa10.73□□□□□ -0.69
CSMD1-208ENST00000520561 MBD4O95243 580 aa10.73□□□□□ -0.69
CSMD1-208ENST00000520561 DACT2Q5SW24 774 aa10.73□□□□□ -0.69
CSMD1-208ENST00000520561 TBC1D32Q96NH3 1257 aa10.73□□□□□ -0.69
CSMD1-208ENST00000520561 LSG1Q9H089 658 aaKnown RBP10.73□□□□□ -0.69
CSMD1-208ENST00000520561 F8W031 263 aaPredicted RBP10.72□□□□□ -0.69
CSMD1-208ENST00000520561 BAG3O95817 575 aa10.72□□□□□ -0.69
CSMD1-208ENST00000520561 YBX3P16989 372 aaKnown RBP eCLIP10.72□□□□□ -0.69
CSMD1-208ENST00000520561 GNAT2P19087 354 aa10.72□□□□□ -0.69
CSMD1-208ENST00000520561 LMNB1P20700 586 aa10.72□□□□□ -0.69
CSMD1-208ENST00000520561 EIF6P56537 245 aaKnown RBP10.72□□□□□ -0.69
CSMD1-208ENST00000520561 GRIK5Q16478 980 aa10.72□□□□□ -0.69
CSMD1-208ENST00000520561 GPR162Q16538 588 aa10.72□□□□□ -0.69
CSMD1-208ENST00000520561 CIAPIN1Q6FI81 312 aa10.72□□□□□ -0.69
CSMD1-208ENST00000520561 RSBN1LQ6PCB5 846 aaPredicted RBP10.72□□□□□ -0.69
CSMD1-208ENST00000520561 CERS3Q8IU89 383 aa10.72□□□□□ -0.69
CSMD1-208ENST00000520561 LCORLQ8N3X6 602 aa10.72□□□□□ -0.69
CSMD1-208ENST00000520561 CERS5Q8N5B7 392 aa10.72□□□□□ -0.69
CSMD1-208ENST00000520561 MIGA1Q8NAN2 632 aa10.72□□□□□ -0.69
CSMD1-208ENST00000520561 DSCC1Q9BVC3 393 aa10.72□□□□□ -0.69
CSMD1-208ENST00000520561 USP26Q9BXU7 913 aa10.72□□□□□ -0.69
CSMD1-208ENST00000520561 TTF2Q9UNY4 1162 aaKnown RBP10.72□□□□□ -0.69
CSMD1-208ENST00000520561 U3KPZ7 1027 aaPredicted RBP10.72□□□□□ -0.69
CSMD1-208ENST00000520561 TIAM2Q8IVF5 1701 aa10.72□□□□□ -0.69
CSMD1-208ENST00000520561 PSMD14O00487 310 aa10.71□□□□□ -0.69
CSMD1-208ENST00000520561 GAKO14976 1311 aa10.71□□□□□ -0.69
CSMD1-208ENST00000520561 RAD17O75943 681 aa10.71□□□□□ -0.69
CSMD1-208ENST00000520561 RBM25P49756 843 aaKnown RBP10.71□□□□□ -0.69
CSMD1-208ENST00000520561 PTH1RQ03431 593 aa10.71□□□□□ -0.69
CSMD1-208ENST00000520561 TNIP1Q15025 636 aa10.71□□□□□ -0.69
CSMD1-208ENST00000520561 DIXDC1Q155Q3 683 aa10.71□□□□□ -0.69
CSMD1-208ENST00000520561 RNF20Q5VTR2 975 aa10.71□□□□□ -0.69
CSMD1-208ENST00000520561 ADGRA1Q86SQ6 560 aa10.71□□□□□ -0.69
CSMD1-208ENST00000520561 KIAA0825Q8IV33 1275 aa10.71□□□□□ -0.69
CSMD1-208ENST00000520561 ZNF384Q8TF68 577 aa10.71□□□□□ -0.69
CSMD1-208ENST00000520561 TEKT1Q969V4 418 aa10.71□□□□□ -0.69
CSMD1-208ENST00000520561 STRBPQ96SI9 672 aaKnown RBP10.71□□□□□ -0.69
CSMD1-208ENST00000520561 MXD3Q9BW11 206 aa10.71□□□□□ -0.69
CSMD1-208ENST00000520561 RPAP1Q9BWH6 1393 aaPredicted RBP10.71□□□□□ -0.69
CSMD1-208ENST00000520561 CRNKL1Q9BZJ0 848 aaKnown RBP10.71□□□□□ -0.69
CSMD1-208ENST00000520561 NACAP1Q9BZK3 213 aa10.71□□□□□ -0.69
CSMD1-208ENST00000520561 ARMT1Q9H993 441 aa10.71□□□□□ -0.69
CSMD1-208ENST00000520561 KCNQ5Q9NR82 932 aa10.71□□□□□ -0.69
CSMD1-208ENST00000520561 HDAC9Q9UKV0 1011 aa10.71□□□□□ -0.69
CSMD1-208ENST00000520561 RBM8AQ9Y5S9 174 aaKnown RBP10.71□□□□□ -0.69
CSMD1-208ENST00000520561 MYH2Q9UKX2 1941 aa10.7□□□□□ -0.7
CSMD1-208ENST00000520561 GRIN3BO60391 1043 aa10.7□□□□□ -0.7
CSMD1-208ENST00000520561 APPP05067 770 aa10.7□□□□□ -0.7
CSMD1-208ENST00000520561 VIL1P09327 827 aaKnown RBP10.7□□□□□ -0.7
CSMD1-208ENST00000520561 HSPD1P10809 573 aaKnown RBP10.7□□□□□ -0.7
CSMD1-208ENST00000520561 PLCG2P16885 1265 aa10.7□□□□□ -0.7
CSMD1-208ENST00000520561 BTDP43251 543 aa10.7□□□□□ -0.7
CSMD1-208ENST00000520561 VPS53Q5VIR6 699 aa10.7□□□□□ -0.7
CSMD1-208ENST00000520561 MAP4K1Q92918 833 aa10.7□□□□□ -0.7
CSMD1-208ENST00000520561 DDRGK1Q96HY6 314 aa10.7□□□□□ -0.7
CSMD1-208ENST00000520561 RIOK1Q9BRS2 568 aaKnown RBP10.7□□□□□ -0.7
CSMD1-208ENST00000520561 AATFQ9NY61 560 aaKnown RBP eCLIP10.7□□□□□ -0.7
CSMD1-208ENST00000520561 CTNNA3Q9UI47 895 aa10.7□□□□□ -0.7
CSMD1-208ENST00000520561 DAGLAQ9Y4D2 1042 aa10.7□□□□□ -0.7
CSMD1-208ENST00000520561 SLC4A4Q9Y6R1 1079 aa10.7□□□□□ -0.7
CSMD1-208ENST00000520561 DICER1Q9UPY3 1922 aaKnown RBP10.7□□□□□ -0.7
CSMD1-208ENST00000520561 ZMYM6O95789 1325 aa10.69□□□□□ -0.7
CSMD1-208ENST00000520561 ZKSCAN1P17029 563 aaPredicted RBP10.69□□□□□ -0.7
CSMD1-208ENST00000520561 HSPA4P34932 840 aa10.69□□□□□ -0.7
CSMD1-208ENST00000520561 ANP32AP39687 249 aaKnown RBP10.69□□□□□ -0.7
CSMD1-208ENST00000520561 CRKP46108 304 aa10.69□□□□□ -0.7
CSMD1-208ENST00000520561 TDO2P48775 406 aa10.69□□□□□ -0.7
CSMD1-208ENST00000520561 SCNN1DP51172 638 aa10.69□□□□□ -0.7
CSMD1-208ENST00000520561 PRELPP51888 382 aa10.69□□□□□ -0.7
CSMD1-208ENST00000520561 DYNLL1P63167 89 aaKnown RBP10.69□□□□□ -0.7
CSMD1-208ENST00000520561 HDLBPQ00341 1268 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms