RNA–Protein interactions for RNA: ENST00000520525.1

TRAPPC13-212, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-212ENST00000520525 TCF12Q99081 682 aa5.75□□□□□ -1.49
TRAPPC13-212ENST00000520525 RUSC1Q9BVN2 902 aa5.75□□□□□ -1.49
TRAPPC13-212ENST00000520525 RNF208Q9H0X6 261 aa5.75□□□□□ -1.49
TRAPPC13-212ENST00000520525 SOX17Q9H6I2 414 aaPredicted RBP5.75□□□□□ -1.49
TRAPPC13-212ENST00000520525 LOC100289279A0A1B0GTE1 492 aa5.74□□□□□ -1.49
TRAPPC13-212ENST00000520525 A0A1W2PP55 124 aa5.74□□□□□ -1.49
TRAPPC13-212ENST00000520525 DLGAP3O95886 979 aa5.74□□□□□ -1.49
TRAPPC13-212ENST00000520525 HOXA10P31260 410 aaPredicted RBP5.74□□□□□ -1.49
TRAPPC13-212ENST00000520525 ANKRD34AQ69YU3 496 aa5.74□□□□□ -1.49
TRAPPC13-212ENST00000520525 CCNJLQ8IV13 435 aa5.74□□□□□ -1.49
TRAPPC13-212ENST00000520525 TMPRSS13Q9BYE2 586 aa5.74□□□□□ -1.49
TRAPPC13-212ENST00000520525 NRSN2Q9GZP1 204 aa5.74□□□□□ -1.49
TRAPPC13-212ENST00000520525 MEGF11A6BM72 1044 aa5.73□□□□□ -1.49
TRAPPC13-212ENST00000520525 GPR182O15218 404 aa5.73□□□□□ -1.49
TRAPPC13-212ENST00000520525 NDUFB5O43674 189 aa5.73□□□□□ -1.49
TRAPPC13-212ENST00000520525 C8AP07357 584 aa5.73□□□□□ -1.49
TRAPPC13-212ENST00000520525 GRIA4P48058 902 aa5.73□□□□□ -1.49
TRAPPC13-212ENST00000520525 ARL4DP49703 201 aa5.73□□□□□ -1.49
TRAPPC13-212ENST00000520525 ORC1Q13415 861 aa5.73□□□□□ -1.49
TRAPPC13-212ENST00000520525 BEND4Q6ZU67 534 aa5.73□□□□□ -1.49
TRAPPC13-212ENST00000520525 BIN2Q9UBW5 565 aaPredicted RBP5.73□□□□□ -1.49
TRAPPC13-212ENST00000520525 A0A096LPE4 126 aa5.72□□□□□ -1.49
TRAPPC13-212ENST00000520525 A0A1W2PPZ6 126 aa5.72□□□□□ -1.49
TRAPPC13-212ENST00000520525 WDR64B1ANS9 1081 aa5.72□□□□□ -1.49
TRAPPC13-212ENST00000520525 BMP3P12645 472 aa5.72□□□□□ -1.49
TRAPPC13-212ENST00000520525 SPRED3Q2MJR0 410 aa5.72□□□□□ -1.49
TRAPPC13-212ENST00000520525 POU5F2Q8N7G0 328 aa5.72□□□□□ -1.49
TRAPPC13-212ENST00000520525 USP26Q9BXU7 913 aa5.72□□□□□ -1.49
TRAPPC13-212ENST00000520525 LIN7BQ9HAP6 207 aa5.72□□□□□ -1.49
TRAPPC13-212ENST00000520525 TIAF1O95411 115 aa5.71□□□□□ -1.5
TRAPPC13-212ENST00000520525 PDE3BQ13370 1112 aa5.71□□□□□ -1.5
TRAPPC13-212ENST00000520525 ZNF423Q2M1K9 1284 aa5.71□□□□□ -1.5
TRAPPC13-212ENST00000520525 KIAA0319Q5VV43 1072 aa5.71□□□□□ -1.5
TRAPPC13-212ENST00000520525 FDX2Q6P4F2 183 aa5.71□□□□□ -1.5
TRAPPC13-212ENST00000520525 CBLL1Q75N03 491 aa5.71□□□□□ -1.5
TRAPPC13-212ENST00000520525 SUGCTQ9HAC7 445 aa5.71□□□□□ -1.5
TRAPPC13-212ENST00000520525 NPHS2Q9NP85 383 aa5.71□□□□□ -1.5
TRAPPC13-212ENST00000520525 PIM2Q9P1W9 311 aa5.71□□□□□ -1.5
TRAPPC13-212ENST00000520525 SART1O43290 800 aaKnown RBP5.7□□□□□ -1.5
TRAPPC13-212ENST00000520525 CPNE3O75131 537 aaKnown RBP5.7□□□□□ -1.5
TRAPPC13-212ENST00000520525 CTSBP07858 339 aa5.7□□□□□ -1.5
TRAPPC13-212ENST00000520525 GSTM4Q03013 218 aa5.7□□□□□ -1.5
TRAPPC13-212ENST00000520525 PCDH1Q08174 1060 aa5.7□□□□□ -1.5
TRAPPC13-212ENST00000520525 LCE4AQ5TA78 99 aa5.7□□□□□ -1.5
TRAPPC13-212ENST00000520525 TMCO4Q5TGY1 634 aa5.7□□□□□ -1.5
TRAPPC13-212ENST00000520525 SMG8Q8ND04 991 aaKnown RBP5.7□□□□□ -1.5
TRAPPC13-212ENST00000520525 CITED4Q96RK1 184 aa5.7□□□□□ -1.5
TRAPPC13-212ENST00000520525 CLEC4MQ9H2X3 399 aaPredicted RBP5.7□□□□□ -1.5
TRAPPC13-212ENST00000520525 KCNF1Q9H3M0 494 aa5.7□□□□□ -1.5
TRAPPC13-212ENST00000520525 HIF3AQ9Y2N7 669 aa5.7□□□□□ -1.5
TRAPPC13-212ENST00000520525 EIF1AYO14602 144 aaKnown RBP5.69□□□□□ -1.5
TRAPPC13-212ENST00000520525 CCDC27Q2M243 656 aa5.69□□□□□ -1.5
TRAPPC13-212ENST00000520525 SGO2Q562F6 1265 aa5.69□□□□□ -1.5
TRAPPC13-212ENST00000520525 NFXL1Q6ZNB6 911 aa5.69□□□□□ -1.5
TRAPPC13-212ENST00000520525 ASIC4Q96FT7 647 aa5.69□□□□□ -1.5
TRAPPC13-212ENST00000520525 MFSD14AQ96MC6 490 aa5.69□□□□□ -1.5
TRAPPC13-212ENST00000520525 ZNF576Q9H609 170 aa5.69□□□□□ -1.5
TRAPPC13-212ENST00000520525 ABCB6Q9NP58 842 aa5.69□□□□□ -1.5
TRAPPC13-212ENST00000520525 PODXL2Q9NZ53 605 aa5.69□□□□□ -1.5
TRAPPC13-212ENST00000520525 NEFLP07196 543 aa5.68□□□□□ -1.5
TRAPPC13-212ENST00000520525 ITGB5P18084 799 aa5.68□□□□□ -1.5
TRAPPC13-212ENST00000520525 ITPKAP23677 461 aa5.68□□□□□ -1.5
TRAPPC13-212ENST00000520525 COL19A1Q14993 1142 aa5.68□□□□□ -1.5
TRAPPC13-212ENST00000520525 MSMPQ1L6U9 139 aa5.68□□□□□ -1.5
TRAPPC13-212ENST00000520525 NUTM2GQ5VZR2 741 aa5.68□□□□□ -1.5
TRAPPC13-212ENST00000520525 CCDC74AQ96AQ1 378 aa5.68□□□□□ -1.5
TRAPPC13-212ENST00000520525 ALKBH8Q96BT7 664 aaKnown RBP5.68□□□□□ -1.5
TRAPPC13-212ENST00000520525 TRIM56Q9BRZ2 755 aaKnown RBP5.68□□□□□ -1.5
TRAPPC13-212ENST00000520525 RBCK1Q9BYM8 510 aa5.68□□□□□ -1.5
TRAPPC13-212ENST00000520525 NIF3L1Q9GZT8 377 aa5.68□□□□□ -1.5
TRAPPC13-212ENST00000520525 DNAJC25Q9H1X3 360 aa5.68□□□□□ -1.5
TRAPPC13-212ENST00000520525 EHD4Q9H223 541 aa5.68□□□□□ -1.5
TRAPPC13-212ENST00000520525 CCDC39Q9UFE4 941 aa5.68□□□□□ -1.5
TRAPPC13-212ENST00000520525 DCTN4Q9UJW0 460 aa5.68□□□□□ -1.5
TRAPPC13-212ENST00000520525 GAS2O43903 313 aaKnown RBP5.67□□□□□ -1.5
TRAPPC13-212ENST00000520525 ECEL1O95672 775 aa5.67□□□□□ -1.5
TRAPPC13-212ENST00000520525 B3GALT4O96024 378 aa5.67□□□□□ -1.5
TRAPPC13-212ENST00000520525 PRNPP04156 253 aa5.67□□□□□ -1.5
TRAPPC13-212ENST00000520525 DRD2P14416 443 aa5.67□□□□□ -1.5
TRAPPC13-212ENST00000520525 FOSL1P15407 271 aa5.67□□□□□ -1.5
TRAPPC13-212ENST00000520525 MAP4P27816 1152 aaKnown RBP5.67□□□□□ -1.5
TRAPPC13-212ENST00000520525 EXOSC6Q5RKV6 272 aaKnown RBP5.67□□□□□ -1.5
TRAPPC13-212ENST00000520525 PRPF40BQ6NWY9 871 aaKnown RBP5.67□□□□□ -1.5
TRAPPC13-212ENST00000520525 C12orf50Q8NA57 414 aaPredicted RBP5.67□□□□□ -1.5
TRAPPC13-212ENST00000520525 C2CD4AQ8NCU7 369 aaPredicted RBP5.67□□□□□ -1.5
TRAPPC13-212ENST00000520525 GLIS3Q8NEA6 775 aa5.67□□□□□ -1.5
TRAPPC13-212ENST00000520525 CYP4F12Q9HCS2 524 aa5.67□□□□□ -1.5
TRAPPC13-212ENST00000520525 ANGEL1Q9UNK9 670 aaKnown RBP5.67□□□□□ -1.5
TRAPPC13-212ENST00000520525 LEMD3Q9Y2U8 911 aa5.67□□□□□ -1.5
TRAPPC13-212ENST00000520525 F13BP05160 661 aa5.66□□□□□ -1.5
TRAPPC13-212ENST00000520525 MAOBP27338 520 aa5.66□□□□□ -1.5
TRAPPC13-212ENST00000520525 MAPK1P28482 360 aa5.66□□□□□ -1.5
TRAPPC13-212ENST00000520525 MFAP1P55081 439 aaKnown RBP5.66□□□□□ -1.5
TRAPPC13-212ENST00000520525 CDPF1Q6NVV7 123 aa5.66□□□□□ -1.5
TRAPPC13-212ENST00000520525 DMRTB1Q96MA1 342 aa5.66□□□□□ -1.5
TRAPPC13-212ENST00000520525 FBXL18Q96ME1 805 aa5.66□□□□□ -1.5
TRAPPC13-212ENST00000520525 CSRNP1Q96S65 589 aa5.66□□□□□ -1.5
TRAPPC13-212ENST00000520525 ATG3Q9NT62 314 aa5.66□□□□□ -1.5
TRAPPC13-212ENST00000520525 ADH5P11766 374 aa5.65□□□□□ -1.5
TRAPPC13-212ENST00000520525 JUNBP17275 347 aaPredicted RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms