RNA–Protein interactions for RNA: ENST00000520522.1

CTNNA1-224, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 390 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-224ENST00000520522 RBM5P52756 815 aaKnown RBP eCLIP11.2□□□□□ -0.62
CTNNA1-224ENST00000520522 SOX10P56693 466 aa11.2□□□□□ -0.62
CTNNA1-224ENST00000520522 RASA3Q14644 834 aa11.2□□□□□ -0.62
CTNNA1-224ENST00000520522 NBPF12Q5TAG4 269 aaPredicted RBP11.2□□□□□ -0.62
CTNNA1-224ENST00000520522 FBXO46Q6PJ61 603 aaPredicted RBP11.2□□□□□ -0.62
CTNNA1-224ENST00000520522 IFNL1Q8IU54 200 aa11.2□□□□□ -0.62
CTNNA1-224ENST00000520522 ANKRD44Q8N8A2 993 aa11.2□□□□□ -0.62
CTNNA1-224ENST00000520522 CLMNQ96JQ2 1002 aa11.2□□□□□ -0.62
CTNNA1-224ENST00000520522 ZNF70Q9UC06 446 aaPredicted RBP11.2□□□□□ -0.62
CTNNA1-224ENST00000520522 TTF2Q9UNY4 1162 aaKnown RBP11.2□□□□□ -0.62
CTNNA1-224ENST00000520522 FZD1Q9UP38 647 aa11.2□□□□□ -0.62
CTNNA1-224ENST00000520522 HDLBPQ00341 1268 aaKnown RBP11.19□□□□□ -0.62
CTNNA1-224ENST00000520522 FBXO33Q7Z6M2 555 aa11.19□□□□□ -0.62
CTNNA1-224ENST00000520522 ANKRD13AQ8IZ07 590 aa11.19□□□□□ -0.62
CTNNA1-224ENST00000520522 VGLL2Q8N8G2 317 aa11.19□□□□□ -0.62
CTNNA1-224ENST00000520522 TBC1D22AQ8WUA7 517 aa11.19□□□□□ -0.62
CTNNA1-224ENST00000520522 OTOFQ9HC10 1997 aa11.19□□□□□ -0.62
CTNNA1-224ENST00000520522 IGF2BP3O00425 579 aaKnown RBP eCLIP11.18□□□□□ -0.62
CTNNA1-224ENST00000520522 USP2O75604 605 aaPredicted RBP11.18□□□□□ -0.62
CTNNA1-224ENST00000520522 PDE8BO95263 885 aa11.18□□□□□ -0.62
CTNNA1-224ENST00000520522 CRKP46108 304 aa11.18□□□□□ -0.62
CTNNA1-224ENST00000520522 LRRC24Q50LG9 513 aa11.18□□□□□ -0.62
CTNNA1-224ENST00000520522 CAVIN4Q5BKX8 364 aa11.18□□□□□ -0.62
CTNNA1-224ENST00000520522 METTL24Q5JXM2 366 aa11.18□□□□□ -0.62
CTNNA1-224ENST00000520522 VPS37DQ86XT2 251 aa11.18□□□□□ -0.62
CTNNA1-224ENST00000520522 DZIP1LQ8IYY4 767 aaKnown RBP11.18□□□□□ -0.62
CTNNA1-224ENST00000520522 TEPSINQ96N21 525 aa11.18□□□□□ -0.62
CTNNA1-224ENST00000520522 R3HDMLQ9H3Y0 253 aa11.18□□□□□ -0.62
CTNNA1-224ENST00000520522 HTTP42858 3142 aa11.17□□□□□ -0.62
CTNNA1-224ENST00000520522 TESPA1A2RU30 521 aaPredicted RBP11.17□□□□□ -0.62
CTNNA1-224ENST00000520522 GJA5P36382 358 aa11.17□□□□□ -0.62
CTNNA1-224ENST00000520522 TNNI2P48788 182 aa11.17□□□□□ -0.62
CTNNA1-224ENST00000520522 OTUD7BQ6GQQ9 843 aa11.17□□□□□ -0.62
CTNNA1-224ENST00000520522 SSH1Q8WYL5 1049 aa11.17□□□□□ -0.62
CTNNA1-224ENST00000520522 MRIQ9BWK5 157 aa11.17□□□□□ -0.62
CTNNA1-224ENST00000520522 TDRD3Q9H7E2 651 aaKnown RBP11.17□□□□□ -0.62
CTNNA1-224ENST00000520522 SUGT1Q9Y2Z0 365 aa11.17□□□□□ -0.62
CTNNA1-224ENST00000520522 MAST3O60307 1309 aa11.16□□□□□ -0.62
CTNNA1-224ENST00000520522 FGFR2P21802 821 aa11.16□□□□□ -0.62
CTNNA1-224ENST00000520522 SLFN5Q08AF3 891 aa11.16□□□□□ -0.62
CTNNA1-224ENST00000520522 PUM3Q15397 648 aaKnown RBP11.16□□□□□ -0.62
CTNNA1-224ENST00000520522 ALDH1L2Q3SY69 923 aa11.16□□□□□ -0.62
CTNNA1-224ENST00000520522 TEKT1Q969V4 418 aa11.16□□□□□ -0.62
CTNNA1-224ENST00000520522 USP44Q9H0E7 712 aa11.16□□□□□ -0.62
CTNNA1-224ENST00000520522 RPAP1Q9BWH6 1393 aaPredicted RBP11.16□□□□□ -0.62
CTNNA1-224ENST00000520522 SPDYE4A6NLX3 237 aa11.15□□□□□ -0.62
CTNNA1-224ENST00000520522 TCP10L2B9ZVM9 353 aa11.15□□□□□ -0.62
CTNNA1-224ENST00000520522 FRAT2O75474 233 aaPredicted RBP11.15□□□□□ -0.62
CTNNA1-224ENST00000520522 IFIT1P09914 478 aaKnown RBP11.15□□□□□ -0.62
CTNNA1-224ENST00000520522 CHAF1AQ13111 956 aaPredicted RBP11.15□□□□□ -0.62
CTNNA1-224ENST00000520522 GRIK5Q16478 980 aa11.15□□□□□ -0.62
CTNNA1-224ENST00000520522 FKBP1CQ5VVH2 108 aa11.15□□□□□ -0.62
CTNNA1-224ENST00000520522 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.15□□□□□ -0.62
CTNNA1-224ENST00000520522 OTOP1Q7RTM1 612 aa11.15□□□□□ -0.62
CTNNA1-224ENST00000520522 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.15□□□□□ -0.62
CTNNA1-224ENST00000520522 OPTNQ96CV9 577 aa11.15□□□□□ -0.62
CTNNA1-224ENST00000520522 ERO1AQ96HE7 468 aa11.15□□□□□ -0.62
CTNNA1-224ENST00000520522 ZDHHC15Q96MV8 337 aa11.15□□□□□ -0.62
CTNNA1-224ENST00000520522 TMEM39BQ9GZU3 492 aa11.15□□□□□ -0.62
CTNNA1-224ENST00000520522 IQSEC3Q9UPP2 1182 aaPredicted RBP11.15□□□□□ -0.62
CTNNA1-224ENST00000520522 EYA2O00167 538 aa11.14□□□□□ -0.63
CTNNA1-224ENST00000520522 CT47B1P0C2W7 299 aaPredicted RBP11.14□□□□□ -0.63
CTNNA1-224ENST00000520522 RFX5P48382 616 aaPredicted RBP11.14□□□□□ -0.63
CTNNA1-224ENST00000520522 BCAMP50895 628 aa11.14□□□□□ -0.63
CTNNA1-224ENST00000520522 MAP3K9P80192 1104 aa11.14□□□□□ -0.63
CTNNA1-224ENST00000520522 CRHR2Q13324 411 aa11.14□□□□□ -0.63
CTNNA1-224ENST00000520522 VGLL4Q14135 290 aa11.14□□□□□ -0.63
CTNNA1-224ENST00000520522 PRPF38BQ5VTL8 546 aaKnown RBP11.14□□□□□ -0.63
CTNNA1-224ENST00000520522 FAM83AQ86UY5 434 aa11.14□□□□□ -0.63
CTNNA1-224ENST00000520522 CDAN1Q8IWY9 1227 aa11.14□□□□□ -0.63
CTNNA1-224ENST00000520522 KLHDC4Q8TBB5 520 aa11.14□□□□□ -0.63
CTNNA1-224ENST00000520522 HOOK2Q96ED9 719 aa11.14□□□□□ -0.63
CTNNA1-224ENST00000520522 MS4A4AQ96JQ5 239 aa11.14□□□□□ -0.63
CTNNA1-224ENST00000520522 PTPN18Q99952 460 aa11.14□□□□□ -0.63
CTNNA1-224ENST00000520522 ELP3Q9H9T3 547 aa11.14□□□□□ -0.63
CTNNA1-224ENST00000520522 TMOD2Q9NZR1 351 aa11.14□□□□□ -0.63
CTNNA1-224ENST00000520522 FBXO3Q9UK99 471 aa11.14□□□□□ -0.63
CTNNA1-224ENST00000520522 TRIM17Q9Y577 477 aa11.14□□□□□ -0.63
CTNNA1-224ENST00000520522 KIAA0100Q14667 2235 aaKnown RBP11.13□□□□□ -0.63
CTNNA1-224ENST00000520522 SLC5A1P13866 664 aa11.13□□□□□ -0.63
CTNNA1-224ENST00000520522 GTF2A2P52657 109 aa11.13□□□□□ -0.63
CTNNA1-224ENST00000520522 APOBEC3HQ6NTF7 200 aaKnown RBP11.13□□□□□ -0.63
CTNNA1-224ENST00000520522 HHIPL2Q6UWX4 724 aa11.13□□□□□ -0.63
CTNNA1-224ENST00000520522 WDR66Q8TBY9 1149 aa11.13□□□□□ -0.63
CTNNA1-224ENST00000520522 LPIN2Q92539 896 aa11.13□□□□□ -0.63
CTNNA1-224ENST00000520522 SMC4Q9NTJ3 1288 aa11.13□□□□□ -0.63
CTNNA1-224ENST00000520522 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.13□□□□□ -0.63
CTNNA1-224ENST00000520522 CSADQ9Y600 493 aa11.13□□□□□ -0.63
CTNNA1-224ENST00000520522 MYH13Q9UKX3 1938 aa11.12□□□□□ -0.63
CTNNA1-224ENST00000520522 SPDYE5A6NIY4 337 aa11.12□□□□□ -0.63
CTNNA1-224ENST00000520522 CIAO1O76071 339 aa11.12□□□□□ -0.63
CTNNA1-224ENST00000520522 SP3Q02447 781 aa11.12□□□□□ -0.63
CTNNA1-224ENST00000520522 INTS3Q68E01 1043 aaKnown RBP11.12□□□□□ -0.63
CTNNA1-224ENST00000520522 TRMT2AQ8IZ69 625 aaKnown RBP11.12□□□□□ -0.63
CTNNA1-224ENST00000520522 CD99L2Q8TCZ2 262 aa11.12□□□□□ -0.63
CTNNA1-224ENST00000520522 BRI3BPQ8WY22 251 aa11.12□□□□□ -0.63
CTNNA1-224ENST00000520522 CCL15-CCL14A0A0B4J2E2 113 aa11.11□□□□□ -0.63
CTNNA1-224ENST00000520522 UBTFL1P0CB47 393 aaPredicted RBP11.11□□□□□ -0.63
CTNNA1-224ENST00000520522 CACNB3P54284 484 aa11.11□□□□□ -0.63
CTNNA1-224ENST00000520522 TAF1CQ15572 869 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms