RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 A0A1W2PP55 124 aa5.68□□□□□ -1.5
HMGB1P41-201ENST00000520234 B8ZZF3 427 aa5.68□□□□□ -1.5
HMGB1P41-201ENST00000520234 PEAR1Q5VY43 1037 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P41-201ENST00000520234 TRIM42Q8IWZ5 723 aa5.68□□□□□ -1.5
HMGB1P41-201ENST00000520234 ARMC10Q8N2F6 343 aa5.68□□□□□ -1.5
HMGB1P41-201ENST00000520234 TMEM102Q8N9M5 508 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P41-201ENST00000520234 UBL7Q96S82 380 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P41-201ENST00000520234 ZKSCAN3Q9BRR0 538 aa5.68□□□□□ -1.5
HMGB1P41-201ENST00000520234 RASSF4Q9H2L5 321 aa5.68□□□□□ -1.5
HMGB1P41-201ENST00000520234 PPP4R2Q9NY27 417 aa5.68□□□□□ -1.5
HMGB1P41-201ENST00000520234 TRAK1Q9UPV9 953 aa5.68□□□□□ -1.5
HMGB1P41-201ENST00000520234 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P41-201ENST00000520234 RBM47A0AV96 593 aaKnown RBP5.67□□□□□ -1.5
HMGB1P41-201ENST00000520234 NFKBIEO00221 500 aa5.67□□□□□ -1.5
HMGB1P41-201ENST00000520234 PDE2AO00408 941 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P41-201ENST00000520234 GADD45BO75293 160 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P41-201ENST00000520234 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.67□□□□□ -1.5
HMGB1P41-201ENST00000520234 CEP135Q66GS9 1140 aa5.67□□□□□ -1.5
HMGB1P41-201ENST00000520234 AGGF1Q8N302 714 aaeCLIP5.67□□□□□ -1.5
HMGB1P41-201ENST00000520234 SHKBP1Q8TBC3 707 aa5.67□□□□□ -1.5
HMGB1P41-201ENST00000520234 EPS8L3Q8TE67 593 aaKnown RBP5.67□□□□□ -1.5
HMGB1P41-201ENST00000520234 CEP41Q9BYV8 373 aa5.67□□□□□ -1.5
HMGB1P41-201ENST00000520234 SRCIN1Q9C0H9 1055 aa5.67□□□□□ -1.5
HMGB1P41-201ENST00000520234 BHLHE41Q9C0J9 482 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P41-201ENST00000520234 EHD4Q9H223 541 aa5.67□□□□□ -1.5
HMGB1P41-201ENST00000520234 NPHS2Q9NP85 383 aa5.67□□□□□ -1.5
HMGB1P41-201ENST00000520234 LATS2Q9NRM7 1088 aa5.67□□□□□ -1.5
HMGB1P41-201ENST00000520234 WWC3Q9ULE0 1092 aa5.67□□□□□ -1.5
HMGB1P41-201ENST00000520234 SPG7Q9UQ90 795 aa5.67□□□□□ -1.5
HMGB1P41-201ENST00000520234 FAM177BA6PVY3 158 aa5.66□□□□□ -1.5
HMGB1P41-201ENST00000520234 PTPRAP18433 802 aa5.66□□□□□ -1.5
HMGB1P41-201ENST00000520234 GNA15P30679 374 aa5.66□□□□□ -1.5
HMGB1P41-201ENST00000520234 ATP11AP98196 1134 aa5.66□□□□□ -1.5
HMGB1P41-201ENST00000520234 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.66□□□□□ -1.5
HMGB1P41-201ENST00000520234 CCNJLQ8IV13 435 aa5.66□□□□□ -1.5
HMGB1P41-201ENST00000520234 MAP4K3Q8IVH8 894 aa5.66□□□□□ -1.5
HMGB1P41-201ENST00000520234 NXPE3Q969Y0 559 aa5.66□□□□□ -1.5
HMGB1P41-201ENST00000520234 MUC3BQ9H195 1237 aa5.66□□□□□ -1.5
HMGB1P41-201ENST00000520234 LIN7BQ9HAP6 207 aa5.66□□□□□ -1.5
HMGB1P41-201ENST00000520234 ZFYVE1Q9HBF4 777 aa5.66□□□□□ -1.5
HMGB1P41-201ENST00000520234 HMX2A2RU54 273 aa5.65□□□□□ -1.5
HMGB1P41-201ENST00000520234 PRNPP04156 253 aa5.65□□□□□ -1.5
HMGB1P41-201ENST00000520234 XPCQ01831 940 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P41-201ENST00000520234 PRPF40BQ6NWY9 871 aaKnown RBP5.65□□□□□ -1.5
HMGB1P41-201ENST00000520234 GIPC2Q8TF65 315 aa5.65□□□□□ -1.5
HMGB1P41-201ENST00000520234 UTP4Q969X6 686 aaKnown RBP5.65□□□□□ -1.5
HMGB1P41-201ENST00000520234 POP1Q99575 1024 aaKnown RBP5.65□□□□□ -1.5
HMGB1P41-201ENST00000520234 DUSP9Q99956 384 aaKnown RBP5.65□□□□□ -1.5
HMGB1P41-201ENST00000520234 ADAM19Q9H013 955 aa5.65□□□□□ -1.5
HMGB1P41-201ENST00000520234 CCDC39Q9UFE4 941 aa5.65□□□□□ -1.5
HMGB1P41-201ENST00000520234 FARP2O94887 1054 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P41-201ENST00000520234 XRCC5P13010 732 aaKnown RBP5.64□□□□□ -1.51
HMGB1P41-201ENST00000520234 ACPPP15309 386 aa5.64□□□□□ -1.51
HMGB1P41-201ENST00000520234 ZNF16P17020 682 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P41-201ENST00000520234 CDC27P30260 824 aa5.64□□□□□ -1.51
HMGB1P41-201ENST00000520234 HOXA10P31260 410 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P41-201ENST00000520234 PTPN12Q05209 780 aaKnown RBP5.64□□□□□ -1.51
HMGB1P41-201ENST00000520234 GRM2Q14416 872 aa5.64□□□□□ -1.51
HMGB1P41-201ENST00000520234 VSIG10LQ86VR7 867 aa5.64□□□□□ -1.51
HMGB1P41-201ENST00000520234 BSNDQ8WZ55 320 aa5.64□□□□□ -1.51
HMGB1P41-201ENST00000520234 SETDB2Q96T68 719 aa5.64□□□□□ -1.51
HMGB1P41-201ENST00000520234 TCF12Q99081 682 aa5.64□□□□□ -1.51
HMGB1P41-201ENST00000520234 BCO2Q9BYV7 579 aa5.64□□□□□ -1.51
HMGB1P41-201ENST00000520234 PIM2Q9P1W9 311 aa5.64□□□□□ -1.51
HMGB1P41-201ENST00000520234 PARP2Q9UGN5 583 aa5.64□□□□□ -1.51
HMGB1P41-201ENST00000520234 TRIM33Q9UPN9 1127 aa5.64□□□□□ -1.51
HMGB1P41-201ENST00000520234 EIF4EBP3O60516 100 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P41-201ENST00000520234 BUD31P41223 144 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P41-201ENST00000520234 CABP4P57796 275 aa5.63□□□□□ -1.51
HMGB1P41-201ENST00000520234 DAB2P98082 770 aa5.63□□□□□ -1.51
HMGB1P41-201ENST00000520234 PSMD2Q13200 908 aa5.63□□□□□ -1.51
HMGB1P41-201ENST00000520234 GDF6Q6KF10 455 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P41-201ENST00000520234 PI16Q6UXB8 463 aa5.63□□□□□ -1.51
HMGB1P41-201ENST00000520234 TMC4Q7Z404 712 aa5.63□□□□□ -1.51
HMGB1P41-201ENST00000520234 TP53INP2Q8IXH6 220 aa5.63□□□□□ -1.51
HMGB1P41-201ENST00000520234 IL22RA1Q8N6P7 574 aa5.63□□□□□ -1.51
HMGB1P41-201ENST00000520234 C12orf49Q9H741 205 aa5.63□□□□□ -1.51
HMGB1P41-201ENST00000520234 PPME1Q9Y570 386 aa5.63□□□□□ -1.51
HMGB1P41-201ENST00000520234 AK5Q9Y6K8 562 aa5.63□□□□□ -1.51
HMGB1P41-201ENST00000520234 TMEM238LA0A1B0GVL6 79 aa5.62□□□□□ -1.51
HMGB1P41-201ENST00000520234 TRPA1O75762 1119 aa5.62□□□□□ -1.51
HMGB1P41-201ENST00000520234 EIF4BP23588 611 aaKnown RBP5.62□□□□□ -1.51
HMGB1P41-201ENST00000520234 ITPKAP23677 461 aa5.62□□□□□ -1.51
HMGB1P41-201ENST00000520234 GSTT1P30711 240 aa5.62□□□□□ -1.51
HMGB1P41-201ENST00000520234 TAGLNQ01995 201 aaKnown RBP5.62□□□□□ -1.51
HMGB1P41-201ENST00000520234 MSMPQ1L6U9 139 aa5.62□□□□□ -1.51
HMGB1P41-201ENST00000520234 RPS26P11Q5JNZ5 115 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P41-201ENST00000520234 CLEC10AQ8IUN9 316 aa5.62□□□□□ -1.51
HMGB1P41-201ENST00000520234 GLIS3Q8NEA6 775 aa5.62□□□□□ -1.51
HMGB1P41-201ENST00000520234 ASAP3Q8TDY4 903 aa5.62□□□□□ -1.51
HMGB1P41-201ENST00000520234 FOXD4L4Q8WXT5 416 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P41-201ENST00000520234 MYRFLQ96LU7 910 aa5.62□□□□□ -1.51
HMGB1P41-201ENST00000520234 HHIPQ96QV1 700 aa5.62□□□□□ -1.51
HMGB1P41-201ENST00000520234 FAM83CQ9BQN1 747 aa5.62□□□□□ -1.51
HMGB1P41-201ENST00000520234 LACRTQ9GZZ8 138 aa5.62□□□□□ -1.51
HMGB1P41-201ENST00000520234 MRS2Q9HD23 443 aa5.62□□□□□ -1.51
HMGB1P41-201ENST00000520234 ABCB6Q9NP58 842 aa5.62□□□□□ -1.51
HMGB1P41-201ENST00000520234 FAM8A1Q9UBU6 413 aa5.62□□□□□ -1.51
HMGB1P41-201ENST00000520234 SOX13Q9UN79 622 aa5.62□□□□□ -1.51
HMGB1P41-201ENST00000520234 A0A096LPE4 126 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms