RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 MYOZ2Q9NPC6 264 aa6.45□□□□□ -1.38
SDCBP-207ENST00000520168 RBM27Q9P2N5 1060 aaKnown RBP6.45□□□□□ -1.38
SDCBP-207ENST00000520168 RRP7AQ9Y3A4 280 aaKnown RBP6.45□□□□□ -1.38
SDCBP-207ENST00000520168 VCANP13611 3396 aa6.45□□□□□ -1.38
SDCBP-207ENST00000520168 MYH3P11055 1940 aa6.44□□□□□ -1.38
SDCBP-207ENST00000520168 GRXCR2A6NFK2 248 aa6.44□□□□□ -1.38
SDCBP-207ENST00000520168 NEFMP07197 916 aa6.44□□□□□ -1.38
SDCBP-207ENST00000520168 USP17L8P0C7I0 530 aa6.44□□□□□ -1.38
SDCBP-207ENST00000520168 MYL6BP14649 208 aa6.44□□□□□ -1.38
SDCBP-207ENST00000520168 EN2P19622 333 aaPredicted RBP6.44□□□□□ -1.38
SDCBP-207ENST00000520168 RSBN1LQ6PCB5 846 aaPredicted RBP6.44□□□□□ -1.38
SDCBP-207ENST00000520168 EFCC1Q9HA90 598 aa6.44□□□□□ -1.38
SDCBP-207ENST00000520168 PODXL2Q9NZ53 605 aa6.44□□□□□ -1.38
SDCBP-207ENST00000520168 POLLQ9UGP5 575 aa6.44□□□□□ -1.38
SDCBP-207ENST00000520168 TRMT112Q9UI30 125 aaKnown RBP6.44□□□□□ -1.38
SDCBP-207ENST00000520168 MYO3BQ8WXR4 1341 aa6.44□□□□□ -1.38
SDCBP-207ENST00000520168 CLSPNQ9HAW4 1339 aa6.44□□□□□ -1.38
SDCBP-207ENST00000520168 C3orf80F5H4A9 247 aa6.43□□□□□ -1.38
SDCBP-207ENST00000520168 UBE2Q2LH0YL09 131 aa6.43□□□□□ -1.38
SDCBP-207ENST00000520168 LCE2BO14633 110 aa6.43□□□□□ -1.38
SDCBP-207ENST00000520168 HSPA5P11021 654 aaKnown RBP6.43□□□□□ -1.38
SDCBP-207ENST00000520168 HSP90B1P14625 803 aaKnown RBP6.43□□□□□ -1.38
SDCBP-207ENST00000520168 EIF4A1P60842 406 aaKnown RBP6.43□□□□□ -1.38
SDCBP-207ENST00000520168 SF3B3Q15393 1217 aaKnown RBP6.43□□□□□ -1.38
SDCBP-207ENST00000520168 SLC9C1Q4G0N8 1177 aa6.43□□□□□ -1.38
SDCBP-207ENST00000520168 SPRYD7Q5W111 196 aa6.43□□□□□ -1.38
SDCBP-207ENST00000520168 PODNQ7Z5L7 613 aa6.43□□□□□ -1.38
SDCBP-207ENST00000520168 NLRP10Q86W26 655 aa6.43□□□□□ -1.38
SDCBP-207ENST00000520168 APOBEC3FQ8IUX4 373 aaKnown RBP6.43□□□□□ -1.38
SDCBP-207ENST00000520168 OGFOD1Q8N543 542 aa6.43□□□□□ -1.38
SDCBP-207ENST00000520168 TBC1D16Q8TBP0 767 aa6.43□□□□□ -1.38
SDCBP-207ENST00000520168 ZNF333Q96JL9 665 aa6.43□□□□□ -1.38
SDCBP-207ENST00000520168 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.43□□□□□ -1.38
SDCBP-207ENST00000520168 OTOFQ9HC10 1997 aa6.43□□□□□ -1.38
SDCBP-207ENST00000520168 EYSQ5T1H1 3165 aa6.43□□□□□ -1.38
SDCBP-207ENST00000520168 SPEF2Q9C093 1822 aa6.42□□□□□ -1.38
SDCBP-207ENST00000520168 H0YGN5 161 aa6.42□□□□□ -1.38
SDCBP-207ENST00000520168 PER1O15534 1290 aaPredicted RBP6.42□□□□□ -1.38
SDCBP-207ENST00000520168 HCLS1P14317 486 aaPredicted RBP6.42□□□□□ -1.38
SDCBP-207ENST00000520168 SP3Q02447 781 aa6.42□□□□□ -1.38
SDCBP-207ENST00000520168 MAP3K11Q16584 847 aa6.42□□□□□ -1.38
SDCBP-207ENST00000520168 SLC4A8Q2Y0W8 1093 aa6.42□□□□□ -1.38
SDCBP-207ENST00000520168 CC2D1BQ5T0F9 858 aaKnown RBP6.42□□□□□ -1.38
SDCBP-207ENST00000520168 LDLRAD1Q5T700 205 aa6.42□□□□□ -1.38
SDCBP-207ENST00000520168 NUDT18Q6ZVK8 323 aa6.42□□□□□ -1.38
SDCBP-207ENST00000520168 GMLQ99445 158 aa6.42□□□□□ -1.38
SDCBP-207ENST00000520168 GGA1Q9UJY5 639 aa6.42□□□□□ -1.38
SDCBP-207ENST00000520168 ASTN2O75129 1339 aaPredicted RBP6.42□□□□□ -1.38
SDCBP-207ENST00000520168 LAMA2P24043 3122 aaKnown RBP6.42□□□□□ -1.38
SDCBP-207ENST00000520168 COL4A1P02462 1669 aa6.42□□□□□ -1.38
SDCBP-207ENST00000520168 USP17L3A6NCW0 530 aa6.41□□□□□ -1.38
SDCBP-207ENST00000520168 USP17L4A6NCW7 530 aa6.41□□□□□ -1.38
SDCBP-207ENST00000520168 PPP1R12BO60237 982 aaPredicted RBP6.41□□□□□ -1.38
SDCBP-207ENST00000520168 RNF40O75150 1001 aa6.41□□□□□ -1.38
SDCBP-207ENST00000520168 GNRH1P01148 92 aa6.41□□□□□ -1.38
SDCBP-207ENST00000520168 CAPN2P17655 700 aa6.41□□□□□ -1.38
SDCBP-207ENST00000520168 OSBPP22059 807 aa6.41□□□□□ -1.38
SDCBP-207ENST00000520168 GPSM2P81274 684 aa6.41□□□□□ -1.38
SDCBP-207ENST00000520168 PTPN12Q05209 780 aaKnown RBP6.41□□□□□ -1.38
SDCBP-207ENST00000520168 DCTN1Q14203 1278 aa6.41□□□□□ -1.38
SDCBP-207ENST00000520168 MOB2Q70IA6 237 aa6.41□□□□□ -1.38
SDCBP-207ENST00000520168 USP17L1Q7RTZ2 530 aa6.41□□□□□ -1.38
SDCBP-207ENST00000520168 NKX2-3Q8TAU0 364 aa6.41□□□□□ -1.38
SDCBP-207ENST00000520168 CD99L2Q8TCZ2 262 aa6.41□□□□□ -1.38
SDCBP-207ENST00000520168 ZNF516Q92618 1163 aa6.41□□□□□ -1.38
SDCBP-207ENST00000520168 CELF1Q92879 486 aaKnown RBP6.41□□□□□ -1.38
SDCBP-207ENST00000520168 HTATIP2Q9BUP3 242 aa6.41□□□□□ -1.38
SDCBP-207ENST00000520168 R3HDMLQ9H3Y0 253 aa6.41□□□□□ -1.38
SDCBP-207ENST00000520168 KCNQ5Q9NR82 932 aa6.41□□□□□ -1.38
SDCBP-207ENST00000520168 WDR70Q9NW82 654 aa6.41□□□□□ -1.38
SDCBP-207ENST00000520168 ANKIB1Q9P2G1 1089 aa6.41□□□□□ -1.38
SDCBP-207ENST00000520168 PPP2R3BQ9Y5P8 575 aa6.41□□□□□ -1.38
SDCBP-207ENST00000520168 PRUNE2Q8WUY3 3088 aa6.41□□□□□ -1.38
SDCBP-207ENST00000520168 SPTBN5Q9NRC6 3674 aaKnown RBP6.4□□□□□ -1.38
SDCBP-207ENST00000520168 MUC3AQ02505 3323 aa6.4□□□□□ -1.38
SDCBP-207ENST00000520168 WNT10BO00744 389 aa6.4□□□□□ -1.38
SDCBP-207ENST00000520168 WDHD1O75717 1129 aaPredicted RBP6.4□□□□□ -1.38
SDCBP-207ENST00000520168 UFL1O94874 794 aa6.4□□□□□ -1.38
SDCBP-207ENST00000520168 U2AF1L5P0DN76 240 aaPredicted RBP6.4□□□□□ -1.38
SDCBP-207ENST00000520168 GGCXP38435 758 aa6.4□□□□□ -1.38
SDCBP-207ENST00000520168 PRMT2P55345 433 aa6.4□□□□□ -1.38
SDCBP-207ENST00000520168 RPS8P62241 208 aaKnown RBP6.4□□□□□ -1.38
SDCBP-207ENST00000520168 U2AF1Q01081 240 aaKnown RBP eCLIP6.4□□□□□ -1.38
SDCBP-207ENST00000520168 CRHR2Q13324 411 aa6.4□□□□□ -1.38
SDCBP-207ENST00000520168 LRP10Q7Z4F1 713 aa6.4□□□□□ -1.38
SDCBP-207ENST00000520168 SLF2Q8IX21 1173 aa6.4□□□□□ -1.38
SDCBP-207ENST00000520168 SLC10A4Q96EP9 437 aa6.4□□□□□ -1.38
SDCBP-207ENST00000520168 WNK4Q96J92 1243 aa6.4□□□□□ -1.38
SDCBP-207ENST00000520168 CDHR5Q9HBB8 845 aa6.4□□□□□ -1.38
SDCBP-207ENST00000520168 BABAM1Q9NWV8 329 aa6.4□□□□□ -1.38
SDCBP-207ENST00000520168 MIS18AQ9NYP9 233 aa6.4□□□□□ -1.38
SDCBP-207ENST00000520168 ANGEL1Q9UNK9 670 aaKnown RBP6.4□□□□□ -1.38
SDCBP-207ENST00000520168 NR2E3Q9Y5X4 410 aa6.4□□□□□ -1.38
SDCBP-207ENST00000520168 XDHP47989 1333 aa6.4□□□□□ -1.39
SDCBP-207ENST00000520168 MGAMO43451 1857 aa6.39□□□□□ -1.39
SDCBP-207ENST00000520168 TESPA1A2RU30 521 aaPredicted RBP6.39□□□□□ -1.39
SDCBP-207ENST00000520168 IGF2BP3O00425 579 aaKnown RBP eCLIP6.39□□□□□ -1.39
SDCBP-207ENST00000520168 EIF5BO60841 1220 aaKnown RBP6.39□□□□□ -1.39
SDCBP-207ENST00000520168 KIF22Q14807 665 aa6.39□□□□□ -1.39
SDCBP-207ENST00000520168 NBPF9Q3BBW0 867 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms