RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 AKAP11Q9UKA4 1901 aa14.51□□□□□ -0.09
HPS4-218ENST00000519774 PDS5AQ29RF7 1337 aaKnown RBP14.5□□□□□ -0.09
HPS4-218ENST00000519774 PRDX5P30044 214 aa14.5□□□□□ -0.09
HPS4-218ENST00000519774 DLGAP5Q15398 846 aa14.5□□□□□ -0.09
HPS4-218ENST00000519774 NBPF9Q3BBW0 867 aa14.5□□□□□ -0.09
HPS4-218ENST00000519774 CFAP100Q494V2 611 aa14.5□□□□□ -0.09
HPS4-218ENST00000519774 RWDD1Q9H446 243 aaPredicted RBP14.5□□□□□ -0.09
HPS4-218ENST00000519774 PCDHAC2Q9Y5I4 1007 aa14.5□□□□□ -0.09
HPS4-218ENST00000519774 MAST3O60307 1309 aa14.49□□□□□ -0.09
HPS4-218ENST00000519774 SALL1Q9NSC2 1324 aa14.49□□□□□ -0.09
HPS4-218ENST00000519774 WNT10BO00744 389 aa14.49□□□□□ -0.09
HPS4-218ENST00000519774 LDHBP07195 334 aaKnown RBP14.49□□□□□ -0.09
HPS4-218ENST00000519774 MMP14P50281 582 aa14.49□□□□□ -0.09
HPS4-218ENST00000519774 ANGEL2Q5VTE6 544 aaKnown RBP14.49□□□□□ -0.09
HPS4-218ENST00000519774 CNTROBQ8N137 903 aa14.49□□□□□ -0.09
HPS4-218ENST00000519774 ZGPATQ8N5A5 531 aaKnown RBP14.49□□□□□ -0.09
HPS4-218ENST00000519774 ZC3H15Q8WU90 426 aaKnown RBP14.49□□□□□ -0.09
HPS4-218ENST00000519774 DCPSQ96C86 337 aaKnown RBP14.49□□□□□ -0.09
HPS4-218ENST00000519774 GLIS2Q9BZE0 524 aaPredicted RBP14.49□□□□□ -0.09
HPS4-218ENST00000519774 ZBTB47Q9UFB7 747 aaPredicted RBP14.49□□□□□ -0.09
HPS4-218ENST00000519774 SUGT1Q9Y2Z0 365 aa14.49□□□□□ -0.09
HPS4-218ENST00000519774 ECM29Q5VYK3 1845 aa14.49□□□□□ -0.09
HPS4-218ENST00000519774 POLR2AP24928 1970 aaKnown RBP14.48□□□□□ -0.09
HPS4-218ENST00000519774 ZAP70P43403 619 aa14.48□□□□□ -0.09
HPS4-218ENST00000519774 CRKP46108 304 aa14.48□□□□□ -0.09
HPS4-218ENST00000519774 TBC1D9Q6ZT07 1266 aa14.48□□□□□ -0.09
HPS4-218ENST00000519774 DZIP1Q86YF9 867 aaKnown RBP14.48□□□□□ -0.09
HPS4-218ENST00000519774 TEKT1Q969V4 418 aa14.48□□□□□ -0.09
HPS4-218ENST00000519774 GCC1Q96CN9 775 aa14.48□□□□□ -0.09
HPS4-218ENST00000519774 ZNF512BQ96KM6 892 aaPredicted RBP14.48□□□□□ -0.09
HPS4-218ENST00000519774 SERPINA10Q9UK55 444 aa14.48□□□□□ -0.09
HPS4-218ENST00000519774 NDUFB9Q9Y6M9 179 aa14.48□□□□□ -0.09
HPS4-218ENST00000519774 MAST2Q6P0Q8 1798 aa14.47□□□□□ -0.09
HPS4-218ENST00000519774 MYO5AQ9Y4I1 1855 aaKnown RBP14.47□□□□□ -0.09
HPS4-218ENST00000519774 IGHDP01880 384 aa14.47□□□□□ -0.09
HPS4-218ENST00000519774 MKRN4PQ13434 485 aaPredicted RBP14.47□□□□□ -0.09
HPS4-218ENST00000519774 DIXDC1Q155Q3 683 aa14.47□□□□□ -0.09
HPS4-218ENST00000519774 ANKRD45Q5TZF3 282 aa14.47□□□□□ -0.09
HPS4-218ENST00000519774 SPTY2D1Q68D10 685 aaPredicted RBP14.47□□□□□ -0.09
HPS4-218ENST00000519774 KRT26Q7Z3Y9 468 aa14.47□□□□□ -0.09
HPS4-218ENST00000519774 ZBED3Q96IU2 234 aaPredicted RBP14.47□□□□□ -0.09
HPS4-218ENST00000519774 RAI14Q9P0K7 980 aa14.47□□□□□ -0.09
HPS4-218ENST00000519774 PGAP2Q9UHJ9 254 aa14.47□□□□□ -0.09
HPS4-218ENST00000519774 SCAF8Q9UPN6 1271 aaKnown RBP14.47□□□□□ -0.09
HPS4-218ENST00000519774 MYH2Q9UKX2 1941 aa14.47□□□□□ -0.09
HPS4-218ENST00000519774 AOX1Q06278 1338 aa14.46□□□□□ -0.09
HPS4-218ENST00000519774 CLRN2A0PK11 232 aa14.46□□□□□ -0.09
HPS4-218ENST00000519774 SPDYE2BA6NHP3 402 aa14.46□□□□□ -0.09
HPS4-218ENST00000519774 ADM5C9JUS6 153 aa14.46□□□□□ -0.09
HPS4-218ENST00000519774 TRAF5O00463 557 aa14.46□□□□□ -0.09
HPS4-218ENST00000519774 MYO1BO43795 1136 aa14.46□□□□□ -0.09
HPS4-218ENST00000519774 ITGBL1O95965 494 aaPredicted RBP14.46□□□□□ -0.09
HPS4-218ENST00000519774 NEFLP07196 543 aa14.46□□□□□ -0.09
HPS4-218ENST00000519774 SPDYE6P0CI01 402 aa14.46□□□□□ -0.09
HPS4-218ENST00000519774 HDLBPQ00341 1268 aaKnown RBP14.46□□□□□ -0.09
HPS4-218ENST00000519774 FMR1Q06787 632 aaKnown RBP eCLIP14.46□□□□□ -0.09
HPS4-218ENST00000519774 ERICH6Q7L0X2 663 aa14.46□□□□□ -0.09
HPS4-218ENST00000519774 USP48Q86UV5 1035 aa14.46□□□□□ -0.09
HPS4-218ENST00000519774 SULF1Q8IWU6 871 aa14.46□□□□□ -0.09
HPS4-218ENST00000519774 MTMR14Q8NCE2 650 aa14.46□□□□□ -0.09
HPS4-218ENST00000519774 PRMT6Q96LA8 375 aaPredicted RBP14.46□□□□□ -0.09
HPS4-218ENST00000519774 VEZTQ9HBM0 779 aa14.46□□□□□ -0.09
HPS4-218ENST00000519774 LRP2BPQ9P2M1 347 aa14.46□□□□□ -0.09
HPS4-218ENST00000519774 CYP2E1P05181 493 aaPredicted RBP14.45□□□□□ -0.1
HPS4-218ENST00000519774 TSHZ3Q63HK5 1081 aa14.45□□□□□ -0.1
HPS4-218ENST00000519774 B4GALNT3Q6L9W6 998 aa14.45□□□□□ -0.1
HPS4-218ENST00000519774 DLK2Q6UY11 383 aa14.45□□□□□ -0.1
HPS4-218ENST00000519774 CDC37L1Q7L3B6 337 aa14.45□□□□□ -0.1
HPS4-218ENST00000519774 GPATCH3Q96I76 525 aa14.45□□□□□ -0.1
HPS4-218ENST00000519774 DNAJC2Q99543 621 aaKnown RBP14.45□□□□□ -0.1
HPS4-218ENST00000519774 TDRD3Q9H7E2 651 aaKnown RBP14.45□□□□□ -0.1
HPS4-218ENST00000519774 DAGLAQ9Y4D2 1042 aa14.45□□□□□ -0.1
HPS4-218ENST00000519774 PASKQ96RG2 1323 aa14.44□□□□□ -0.1
HPS4-218ENST00000519774 PITPNM2Q9BZ72 1349 aa14.44□□□□□ -0.1
HPS4-218ENST00000519774 TRPM7Q96QT4 1865 aa14.44□□□□□ -0.1
HPS4-218ENST00000519774 DOCK2Q92608 1830 aa14.44□□□□□ -0.1
HPS4-218ENST00000519774 MECOMQ03112 1051 aa14.44□□□□□ -0.1
HPS4-218ENST00000519774 HHIPL2Q6UWX4 724 aa14.44□□□□□ -0.1
HPS4-218ENST00000519774 SMC5Q8IY18 1101 aa14.44□□□□□ -0.1
HPS4-218ENST00000519774 OTUD7AQ8TE49 926 aaPredicted RBP14.44□□□□□ -0.1
HPS4-218ENST00000519774 BOLA2Q9H3K6 86 aa14.44□□□□□ -0.1
HPS4-218ENST00000519774 ZNF408Q9H9D4 720 aa14.44□□□□□ -0.1
HPS4-218ENST00000519774 PIH1D3Q9NQM4 214 aaKnown RBP14.44□□□□□ -0.1
HPS4-218ENST00000519774 GOLIM4O00461 696 aa14.43□□□□□ -0.1
HPS4-218ENST00000519774 IDH1O75874 414 aaKnown RBP14.43□□□□□ -0.1
HPS4-218ENST00000519774 HSPA6P17066 643 aa14.43□□□□□ -0.1
HPS4-218ENST00000519774 ATP5JP18859 108 aa14.43□□□□□ -0.1
HPS4-218ENST00000519774 APOBEC3FQ8IUX4 373 aaKnown RBP14.43□□□□□ -0.1
HPS4-218ENST00000519774 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.43□□□□□ -0.1
HPS4-218ENST00000519774 ZDHHC15Q96MV8 337 aa14.43□□□□□ -0.1
HPS4-218ENST00000519774 ANTXR1Q9H6X2 564 aa14.43□□□□□ -0.1
HPS4-218ENST00000519774 ECHDC1Q9NTX5 307 aa14.43□□□□□ -0.1
HPS4-218ENST00000519774 ZNF70Q9UC06 446 aaPredicted RBP14.43□□□□□ -0.1
HPS4-218ENST00000519774 APLP1P51693 650 aa14.42□□□□□ -0.1
HPS4-218ENST00000519774 CACNB3P54284 484 aa14.42□□□□□ -0.1
HPS4-218ENST00000519774 GSTO1P78417 241 aa14.42□□□□□ -0.1
HPS4-218ENST00000519774 SPDYE2Q495Y8 402 aa14.42□□□□□ -0.1
HPS4-218ENST00000519774 APOBEC3HQ6NTF7 200 aaKnown RBP14.42□□□□□ -0.1
HPS4-218ENST00000519774 SLF2Q8IX21 1173 aa14.42□□□□□ -0.1
HPS4-218ENST00000519774 NSUN4Q96CB9 384 aaKnown RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms