RNA–Protein interactions for RNA: ENST00000519414.5

CHMP7-204, Transcript of charged multivesicular body protein 7, humanhuman

TSL 3

Gene CHMP7, Length 914 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-204ENST00000519414 OPTNQ96CV9 577 aa24.28■■□□□ 1.48
CHMP7-204ENST00000519414 TEPSINQ96N21 525 aa24.28■■□□□ 1.48
CHMP7-204ENST00000519414 PTPN18Q99952 460 aa24.28■■□□□ 1.48
CHMP7-204ENST00000519414 ELP3Q9H9T3 547 aa24.28■■□□□ 1.48
CHMP7-204ENST00000519414 TNNI2P48788 182 aa24.27■■□□□ 1.48
CHMP7-204ENST00000519414 FBXO33Q7Z6M2 555 aa24.27■■□□□ 1.48
CHMP7-204ENST00000519414 VPS37DQ86XT2 251 aa24.27■■□□□ 1.48
CHMP7-204ENST00000519414 TCP10L2B9ZVM9 353 aa24.26■■□□□ 1.47
CHMP7-204ENST00000519414 RABL6Q3YEC7 729 aaPredicted RBP24.26■■□□□ 1.47
CHMP7-204ENST00000519414 CD99L2Q8TCZ2 262 aa24.26■■□□□ 1.47
CHMP7-204ENST00000519414 PTPN22Q9Y2R2 807 aa24.26■■□□□ 1.47
CHMP7-204ENST00000519414 LAMB1P07942 1786 aa24.25■■□□□ 1.47
CHMP7-204ENST00000519414 HDLBPQ00341 1268 aaKnown RBP24.25■■□□□ 1.47
CHMP7-204ENST00000519414 SP3Q02447 781 aa24.25■■□□□ 1.47
CHMP7-204ENST00000519414 CAVIN4Q5BKX8 364 aa24.25■■□□□ 1.47
CHMP7-204ENST00000519414 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.25■■□□□ 1.47
CHMP7-204ENST00000519414 CDAN1Q8IWY9 1227 aa24.25■■□□□ 1.47
CHMP7-204ENST00000519414 TBC1D22AQ8WUA7 517 aa24.25■■□□□ 1.47
CHMP7-204ENST00000519414 MS4A4AQ96JQ5 239 aa24.25■■□□□ 1.47
CHMP7-204ENST00000519414 TMEM39BQ9GZU3 492 aa24.25■■□□□ 1.47
CHMP7-204ENST00000519414 BICC1Q9H694 974 aaKnown RBP24.25■■□□□ 1.47
CHMP7-204ENST00000519414 MAP3K9P80192 1104 aa24.24■■□□□ 1.47
CHMP7-204ENST00000519414 EFCC1Q9HA90 598 aa24.24■■□□□ 1.47
CHMP7-204ENST00000519414 FRAT2O75474 233 aaPredicted RBP24.23■■□□□ 1.47
CHMP7-204ENST00000519414 GRIK5Q16478 980 aa24.23■■□□□ 1.47
CHMP7-204ENST00000519414 LRRC24Q50LG9 513 aa24.23■■□□□ 1.47
CHMP7-204ENST00000519414 METTL24Q5JXM2 366 aa24.23■■□□□ 1.47
CHMP7-204ENST00000519414 ANKRD44Q8N8A2 993 aa24.23■■□□□ 1.47
CHMP7-204ENST00000519414 IQSEC3Q9UPP2 1182 aaPredicted RBP24.23■■□□□ 1.47
CHMP7-204ENST00000519414 PDE8BO95263 885 aa24.22■■□□□ 1.47
CHMP7-204ENST00000519414 GTF2A2P52657 109 aa24.22■■□□□ 1.47
CHMP7-204ENST00000519414 CHAF1AQ13111 956 aaPredicted RBP24.22■■□□□ 1.47
CHMP7-204ENST00000519414 VGLL4Q14135 290 aa24.22■■□□□ 1.47
CHMP7-204ENST00000519414 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.22■■□□□ 1.47
CHMP7-204ENST00000519414 CSADQ9Y600 493 aa24.22■■□□□ 1.47
CHMP7-204ENST00000519414 VGLL2Q8N8G2 317 aa24.21■■□□□ 1.47
CHMP7-204ENST00000519414 BRI3BPQ8WY22 251 aa24.21■■□□□ 1.47
CHMP7-204ENST00000519414 TEKT1Q969V4 418 aa24.21■■□□□ 1.47
CHMP7-204ENST00000519414 MRIQ9BWK5 157 aa24.21■■□□□ 1.47
CHMP7-204ENST00000519414 ZNF521Q96K83 1311 aa24.2■■□□□ 1.46
CHMP7-204ENST00000519414 CCL15-CCL14A0A0B4J2E2 113 aa24.2■■□□□ 1.46
CHMP7-204ENST00000519414 POTEFA5A3E0 1075 aa24.2■■□□□ 1.46
CHMP7-204ENST00000519414 CCL15Q16663 113 aa24.2■■□□□ 1.46
CHMP7-204ENST00000519414 MRPL50Q8N5N7 158 aaKnown RBP24.2■■□□□ 1.46
CHMP7-204ENST00000519414 CNKSR2Q8WXI2 1034 aa24.2■■□□□ 1.46
CHMP7-204ENST00000519414 ARMC5Q96C12 935 aa24.2■■□□□ 1.46
CHMP7-204ENST00000519414 ARHGEF6Q15052 776 aa24.19■■□□□ 1.46
CHMP7-204ENST00000519414 ZFYVE28Q9HCC9 887 aa24.19■■□□□ 1.46
CHMP7-204ENST00000519414 PTPRCP08575 1304 aa24.18■■□□□ 1.46
CHMP7-204ENST00000519414 BCAMP50895 628 aa24.18■■□□□ 1.46
CHMP7-204ENST00000519414 TAF1CQ15572 869 aaPredicted RBP24.18■■□□□ 1.46
CHMP7-204ENST00000519414 OTUD5Q96G74 571 aa24.18■■□□□ 1.46
CHMP7-204ENST00000519414 ZDHHC15Q96MV8 337 aa24.18■■□□□ 1.46
CHMP7-204ENST00000519414 TMOD2Q9NZR1 351 aa24.18■■□□□ 1.46
CHMP7-204ENST00000519414 SUGT1Q9Y2Z0 365 aa24.18■■□□□ 1.46
CHMP7-204ENST00000519414 ARAP2Q8WZ64 1704 aa24.18■■□□□ 1.46
CHMP7-204ENST00000519414 KIF16BQ96L93 1317 aa24.17■■□□□ 1.46
CHMP7-204ENST00000519414 SPDYE5A6NIY4 337 aa24.17■■□□□ 1.46
CHMP7-204ENST00000519414 CACNB3P54284 484 aa24.17■■□□□ 1.46
CHMP7-204ENST00000519414 CAP1Q01518 475 aa24.17■■□□□ 1.46
CHMP7-204ENST00000519414 FKBP1CQ5VVH2 108 aa24.17■■□□□ 1.46
CHMP7-204ENST00000519414 FAM83AQ86UY5 434 aa24.17■■□□□ 1.46
CHMP7-204ENST00000519414 HOOK2Q96ED9 719 aa24.17■■□□□ 1.46
CHMP7-204ENST00000519414 OTOFQ9HC10 1997 aa24.16■■□□□ 1.46
CHMP7-204ENST00000519414 MAST3O60307 1309 aa24.16■■□□□ 1.46
CHMP7-204ENST00000519414 IFIT1P09914 478 aaKnown RBP24.16■■□□□ 1.46
CHMP7-204ENST00000519414 APOBEC3HQ6NTF7 200 aaKnown RBP24.16■■□□□ 1.46
CHMP7-204ENST00000519414 FAM43AQ8N2R8 423 aa24.16■■□□□ 1.46
CHMP7-204ENST00000519414 KLHDC4Q8TBB5 520 aa24.16■■□□□ 1.46
CHMP7-204ENST00000519414 GCC1Q96CN9 775 aa24.16■■□□□ 1.46
CHMP7-204ENST00000519414 USP44Q9H0E7 712 aa24.16■■□□□ 1.46
CHMP7-204ENST00000519414 WDHD1O75717 1129 aaPredicted RBP24.15■■□□□ 1.46
CHMP7-204ENST00000519414 PUM3Q15397 648 aaKnown RBP24.15■■□□□ 1.46
CHMP7-204ENST00000519414 ERO1BQ86YB8 467 aa24.15■■□□□ 1.46
CHMP7-204ENST00000519414 SNCAIPQ9Y6H5 919 aa24.15■■□□□ 1.46
CHMP7-204ENST00000519414 CETPP11597 493 aa24.14■■□□□ 1.45
CHMP7-204ENST00000519414 FGFR2P21802 821 aa24.14■■□□□ 1.45
CHMP7-204ENST00000519414 HHIPL2Q6UWX4 724 aa24.14■■□□□ 1.45
CHMP7-204ENST00000519414 WRNIP1Q96S55 665 aa24.14■■□□□ 1.45
CHMP7-204ENST00000519414 HTTP42858 3142 aa24.14■■□□□ 1.45
CHMP7-204ENST00000519414 ZCCHC17Q9NP64 241 aaKnown RBP24.13■■□□□ 1.45
CHMP7-204ENST00000519414 DCAF15Q66K64 600 aa24.12■■□□□ 1.45
CHMP7-204ENST00000519414 NBPF11Q86T75 865 aa24.12■■□□□ 1.45
CHMP7-204ENST00000519414 SSH1Q8WYL5 1049 aa24.12■■□□□ 1.45
CHMP7-204ENST00000519414 ZKSCAN4Q969J2 545 aaPredicted RBP24.12■■□□□ 1.45
CHMP7-204ENST00000519414 ZNF333Q96JL9 665 aa24.12■■□□□ 1.45
CHMP7-204ENST00000519414 TMEM106CQ9BVX2 250 aa24.12■■□□□ 1.45
CHMP7-204ENST00000519414 E9PSI1 815 aa24.11■■□□□ 1.45
CHMP7-204ENST00000519414 EYA2O00167 538 aa24.11■■□□□ 1.45
CHMP7-204ENST00000519414 TLR2O60603 784 aa24.11■■□□□ 1.45
CHMP7-204ENST00000519414 EN2P19622 333 aaPredicted RBP24.11■■□□□ 1.45
CHMP7-204ENST00000519414 SNAPC2Q13487 334 aa24.11■■□□□ 1.45
CHMP7-204ENST00000519414 WDR66Q8TBY9 1149 aa24.11■■□□□ 1.45
CHMP7-204ENST00000519414 RPAP1Q9BWH6 1393 aaPredicted RBP24.11■■□□□ 1.45
CHMP7-204ENST00000519414 IRF6O14896 467 aa24.1■■□□□ 1.45
CHMP7-204ENST00000519414 SLC5A1P13866 664 aa24.1■■□□□ 1.45
CHMP7-204ENST00000519414 RFX5P48382 616 aaPredicted RBP24.1■■□□□ 1.45
CHMP7-204ENST00000519414 PPIL2Q13356 520 aa24.1■■□□□ 1.45
CHMP7-204ENST00000519414 SLC9C1Q4G0N8 1177 aa24.1■■□□□ 1.45
CHMP7-204ENST00000519414 LPIN2Q92539 896 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms