RNA–Protein interactions for RNA: ENST00000519120.1

MRPS28-204, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 403 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-204ENST00000519120 SPRYD7Q5W111 196 aa19.7■□□□□ 0.74
MRPS28-204ENST00000519120 INTS3Q68E01 1043 aaKnown RBP19.7■□□□□ 0.74
MRPS28-204ENST00000519120 CFHR5Q9BXR6 569 aa19.7■□□□□ 0.74
MRPS28-204ENST00000519120 MAST3O60307 1309 aa19.7■□□□□ 0.74
MRPS28-204ENST00000519120 ZBTB22O15209 634 aa19.69■□□□□ 0.74
MRPS28-204ENST00000519120 ZBTB48P10074 688 aaPredicted RBP19.69■□□□□ 0.74
MRPS28-204ENST00000519120 INHBEP58166 350 aa19.69■□□□□ 0.74
MRPS28-204ENST00000519120 CHAF1AQ13111 956 aaPredicted RBP19.69■□□□□ 0.74
MRPS28-204ENST00000519120 TDRD3Q9H7E2 651 aaKnown RBP19.69■□□□□ 0.74
MRPS28-204ENST00000519120 IQSEC3Q9UPP2 1182 aaPredicted RBP19.69■□□□□ 0.74
MRPS28-204ENST00000519120 GRIK5Q16478 980 aa19.68■□□□□ 0.74
MRPS28-204ENST00000519120 NBPF12Q5TAG4 269 aaPredicted RBP19.68■□□□□ 0.74
MRPS28-204ENST00000519120 TEKT1Q969V4 418 aa19.68■□□□□ 0.74
MRPS28-204ENST00000519120 SLC10A4Q96EP9 437 aa19.68■□□□□ 0.74
MRPS28-204ENST00000519120 LRRFIP2Q9Y608 721 aaKnown RBP19.68■□□□□ 0.74
MRPS28-204ENST00000519120 LAMB1P07942 1786 aa19.67■□□□□ 0.74
MRPS28-204ENST00000519120 IPO8O15397 1037 aaKnown RBP19.67■□□□□ 0.74
MRPS28-204ENST00000519120 GNAI3P08754 354 aa19.67■□□□□ 0.74
MRPS28-204ENST00000519120 IL15P40933 162 aaPredicted RBP19.67■□□□□ 0.74
MRPS28-204ENST00000519120 IREB2P48200 963 aaKnown RBP19.67■□□□□ 0.74
MRPS28-204ENST00000519120 TNNI2P48788 182 aa19.67■□□□□ 0.74
MRPS28-204ENST00000519120 WDR66Q8TBY9 1149 aa19.67■□□□□ 0.74
MRPS28-204ENST00000519120 ZDHHC15Q96MV8 337 aa19.67■□□□□ 0.74
MRPS28-204ENST00000519120 MEIS3Q99687 375 aa19.67■□□□□ 0.74
MRPS28-204ENST00000519120 COPRSQ9NQ92 184 aa19.67■□□□□ 0.74
MRPS28-204ENST00000519120 CEP126Q9P2H0 1117 aa19.67■□□□□ 0.74
MRPS28-204ENST00000519120 MANSC4A6NHS7 340 aaPredicted RBP19.66■□□□□ 0.74
MRPS28-204ENST00000519120 ALDH1A1P00352 501 aa19.66■□□□□ 0.74
MRPS28-204ENST00000519120 FKBP1CQ5VVH2 108 aa19.66■□□□□ 0.74
MRPS28-204ENST00000519120 ANKRD13AQ8IZ07 590 aa19.66■□□□□ 0.74
MRPS28-204ENST00000519120 TEPSINQ96N21 525 aa19.66■□□□□ 0.74
MRPS28-204ENST00000519120 CCDC85CA6NKD9 419 aa19.65■□□□□ 0.74
MRPS28-204ENST00000519120 USP2O75604 605 aaPredicted RBP19.65■□□□□ 0.74
MRPS28-204ENST00000519120 MTX1Q13505 466 aa19.65■□□□□ 0.74
MRPS28-204ENST00000519120 ATP2B3Q16720 1220 aa19.65■□□□□ 0.74
MRPS28-204ENST00000519120 HHIPL2Q6UWX4 724 aa19.65■□□□□ 0.74
MRPS28-204ENST00000519120 CTU1Q7Z7A3 348 aaKnown RBP19.65■□□□□ 0.74
MRPS28-204ENST00000519120 WNK4Q96J92 1243 aa19.65■□□□□ 0.74
MRPS28-204ENST00000519120 FZD1Q9UP38 647 aa19.65■□□□□ 0.74
MRPS28-204ENST00000519120 SEMA3EO15041 775 aa19.64■□□□□ 0.73
MRPS28-204ENST00000519120 RGS19P49795 217 aa19.64■□□□□ 0.73
MRPS28-204ENST00000519120 FAM83AQ86UY5 434 aa19.64■□□□□ 0.73
MRPS28-204ENST00000519120 CLMNQ96JQ2 1002 aa19.64■□□□□ 0.73
MRPS28-204ENST00000519120 SIL1Q9H173 461 aa19.64■□□□□ 0.73
MRPS28-204ENST00000519120 MKRN3Q13064 507 aaKnown RBP19.63■□□□□ 0.73
MRPS28-204ENST00000519120 ATF7IPQ6VMQ6 1270 aa19.63■□□□□ 0.73
MRPS28-204ENST00000519120 GNL3LQ9NVN8 582 aaKnown RBP19.63■□□□□ 0.73
MRPS28-204ENST00000519120 TMOD2Q9NZR1 351 aa19.63■□□□□ 0.73
MRPS28-204ENST00000519120 RPAP1Q9BWH6 1393 aaPredicted RBP19.62■□□□□ 0.73
MRPS28-204ENST00000519120 SALL1Q9NSC2 1324 aa19.62■□□□□ 0.73
MRPS28-204ENST00000519120 TCP10L2B9ZVM9 353 aa19.62■□□□□ 0.73
MRPS28-204ENST00000519120 TBC1D8O95759 1140 aa19.62■□□□□ 0.73
MRPS28-204ENST00000519120 TRIM27P14373 513 aa19.62■□□□□ 0.73
MRPS28-204ENST00000519120 PKN2Q16513 984 aaKnown RBP19.62■□□□□ 0.73
MRPS28-204ENST00000519120 APOBEC3HQ6NTF7 200 aaKnown RBP19.62■□□□□ 0.73
MRPS28-204ENST00000519120 GPR25O00155 361 aa19.61■□□□□ 0.73
MRPS28-204ENST00000519120 IFNL1Q8IU54 200 aa19.61■□□□□ 0.73
MRPS28-204ENST00000519120 ZNF296Q8WUU4 475 aaPredicted RBP19.61■□□□□ 0.73
MRPS28-204ENST00000519120 HOOK2Q96ED9 719 aa19.61■□□□□ 0.73
MRPS28-204ENST00000519120 TMEM39BQ9GZU3 492 aa19.61■□□□□ 0.73
MRPS28-204ENST00000519120 PA2G4Q9UQ80 394 aaKnown RBP19.61■□□□□ 0.73
MRPS28-204ENST00000519120 MYH13Q9UKX3 1938 aa19.61■□□□□ 0.73
MRPS28-204ENST00000519120 DENND2AQ9ULE3 1009 aa19.6■□□□□ 0.73
MRPS28-204ENST00000519120 PDS5AQ29RF7 1337 aaKnown RBP19.59■□□□□ 0.73
MRPS28-204ENST00000519120 TESPA1A2RU30 521 aaPredicted RBP19.59■□□□□ 0.73
MRPS28-204ENST00000519120 SRGAP3O43295 1099 aa19.59■□□□□ 0.73
MRPS28-204ENST00000519120 CDAN1Q8IWY9 1227 aa19.59■□□□□ 0.73
MRPS28-204ENST00000519120 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.59■□□□□ 0.73
MRPS28-204ENST00000519120 OTOFQ9HC10 1997 aa19.59■□□□□ 0.73
MRPS28-204ENST00000519120 BCAR3O75815 825 aa19.58■□□□□ 0.72
MRPS28-204ENST00000519120 GNAI2P04899 355 aa19.58■□□□□ 0.72
MRPS28-204ENST00000519120 GJA5P36382 358 aa19.58■□□□□ 0.72
MRPS28-204ENST00000519120 OTUD7BQ6GQQ9 843 aa19.58■□□□□ 0.72
MRPS28-204ENST00000519120 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.58■□□□□ 0.72
MRPS28-204ENST00000519120 ZGPATQ8N5A5 531 aaKnown RBP19.58■□□□□ 0.72
MRPS28-204ENST00000519120 AKAP2Q9Y2D5 859 aa19.58■□□□□ 0.72
MRPS28-204ENST00000519120 FKTNO75072 461 aa19.57■□□□□ 0.72
MRPS28-204ENST00000519120 LDHBP07195 334 aaKnown RBP19.57■□□□□ 0.72
MRPS28-204ENST00000519120 PHKA1P46020 1223 aa19.57■□□□□ 0.72
MRPS28-204ENST00000519120 MAP3K9P80192 1104 aa19.57■□□□□ 0.72
MRPS28-204ENST00000519120 DIEXFQ68CQ4 756 aaKnown RBP19.57■□□□□ 0.72
MRPS28-204ENST00000519120 CCDC102BQ68D86 513 aa19.57■□□□□ 0.72
MRPS28-204ENST00000519120 MIER1Q8N108 512 aa19.57■□□□□ 0.72
MRPS28-204ENST00000519120 FRAT1Q92837 279 aaPredicted RBP19.57■□□□□ 0.72
MRPS28-204ENST00000519120 DAGLAQ9Y4D2 1042 aa19.57■□□□□ 0.72
MRPS28-204ENST00000519120 IGF2BP3O00425 579 aaKnown RBP eCLIP19.56■□□□□ 0.72
MRPS28-204ENST00000519120 PRDX5P30044 214 aa19.56■□□□□ 0.72
MRPS28-204ENST00000519120 CACNB3P54284 484 aa19.56■□□□□ 0.72
MRPS28-204ENST00000519120 HNRNPUQ00839 825 aaKnown RBP eCLIP19.56■□□□□ 0.72
MRPS28-204ENST00000519120 VGLL4Q14135 290 aa19.56■□□□□ 0.72
MRPS28-204ENST00000519120 ZKSCAN2Q63HK3 967 aa19.56■□□□□ 0.72
MRPS28-204ENST00000519120 OPTNQ96CV9 577 aa19.56■□□□□ 0.72
MRPS28-204ENST00000519120 ELP3Q9H9T3 547 aa19.56■□□□□ 0.72
MRPS28-204ENST00000519120 CSADQ9Y600 493 aa19.56■□□□□ 0.72
MRPS28-204ENST00000519120 A0A1B0GUL7 405 aa19.55■□□□□ 0.72
MRPS28-204ENST00000519120 MLLT1Q03111 559 aaPredicted RBP19.55■□□□□ 0.72
MRPS28-204ENST00000519120 MVPQ14764 893 aaKnown RBP19.55■□□□□ 0.72
MRPS28-204ENST00000519120 DCAF15Q66K64 600 aa19.55■□□□□ 0.72
MRPS28-204ENST00000519120 FAM151AQ8WW52 585 aa19.55■□□□□ 0.72
MRPS28-204ENST00000519120 ADORA1P30542 326 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms