RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 ZNF280AP59817 542 aaPredicted RBP11.46□□□□□ -0.57
CLN8-203ENST00000518780 HHIPL2Q6UWX4 724 aa11.46□□□□□ -0.57
CLN8-203ENST00000518780 DZIP1Q86YF9 867 aaKnown RBP11.46□□□□□ -0.57
CLN8-203ENST00000518780 CERS5Q8N5B7 392 aa11.46□□□□□ -0.57
CLN8-203ENST00000518780 RILPL2Q969X0 211 aa11.46□□□□□ -0.57
CLN8-203ENST00000518780 L3MBTL3Q96JM7 780 aaPredicted RBP11.46□□□□□ -0.57
CLN8-203ENST00000518780 FSD1Q9BTV5 496 aa11.46□□□□□ -0.57
CLN8-203ENST00000518780 ANTXR1Q9H6X2 564 aa11.46□□□□□ -0.57
CLN8-203ENST00000518780 PIH1D3Q9NQM4 214 aaKnown RBP11.46□□□□□ -0.57
CLN8-203ENST00000518780 COL1A1P02452 1464 aaPredicted RBP11.45□□□□□ -0.58
CLN8-203ENST00000518780 ZNF541Q9H0D2 1346 aa11.45□□□□□ -0.58
CLN8-203ENST00000518780 H7C1D1 291 aa11.45□□□□□ -0.58
CLN8-203ENST00000518780 RNF113AO15541 343 aaKnown RBP11.45□□□□□ -0.58
CLN8-203ENST00000518780 PRDX5P30044 214 aa11.45□□□□□ -0.58
CLN8-203ENST00000518780 SLC9C2Q5TAH2 1124 aa11.45□□□□□ -0.58
CLN8-203ENST00000518780 NAA16Q6N069 864 aaPredicted RBP11.45□□□□□ -0.58
CLN8-203ENST00000518780 CASC1Q6TDU7 716 aa11.45□□□□□ -0.58
CLN8-203ENST00000518780 TBC1D9Q6ZT07 1266 aa11.45□□□□□ -0.58
CLN8-203ENST00000518780 MTMR14Q8NCE2 650 aa11.45□□□□□ -0.58
CLN8-203ENST00000518780 TEKT1Q969V4 418 aa11.45□□□□□ -0.58
CLN8-203ENST00000518780 NSUN4Q96CB9 384 aaKnown RBP11.45□□□□□ -0.58
CLN8-203ENST00000518780 TTF2Q9UNY4 1162 aaKnown RBP11.45□□□□□ -0.58
CLN8-203ENST00000518780 GJA3Q9Y6H8 435 aa11.45□□□□□ -0.58
CLN8-203ENST00000518780 IQCA1LA6NCM1 817 aa11.44□□□□□ -0.58
CLN8-203ENST00000518780 BAG3O95817 575 aa11.44□□□□□ -0.58
CLN8-203ENST00000518780 LMOD1P29536 600 aaPredicted RBP11.44□□□□□ -0.58
CLN8-203ENST00000518780 ADD2P35612 726 aa11.44□□□□□ -0.58
CLN8-203ENST00000518780 GMPSP49915 693 aaPredicted RBP11.44□□□□□ -0.58
CLN8-203ENST00000518780 MECOMQ03112 1051 aa11.44□□□□□ -0.58
CLN8-203ENST00000518780 KIAA0825Q8IV33 1275 aa11.44□□□□□ -0.58
CLN8-203ENST00000518780 RUFY2Q8WXA3 655 aa11.44□□□□□ -0.58
CLN8-203ENST00000518780 EDC3Q96F86 508 aaKnown RBP11.44□□□□□ -0.58
CLN8-203ENST00000518780 ZDHHC15Q96MV8 337 aa11.44□□□□□ -0.58
CLN8-203ENST00000518780 GPRC5DQ9NZD1 345 aa11.44□□□□□ -0.58
CLN8-203ENST00000518780 CNOT7Q9UIV1 285 aaKnown RBP11.44□□□□□ -0.58
CLN8-203ENST00000518780 JAG2Q9Y219 1238 aa11.44□□□□□ -0.58
CLN8-203ENST00000518780 ZBTB12Q9Y330 459 aaPredicted RBP11.44□□□□□ -0.58
CLN8-203ENST00000518780 GAKO14976 1311 aa11.43□□□□□ -0.58
CLN8-203ENST00000518780 GOLGB1Q14789 3259 aaKnown RBP11.43□□□□□ -0.58
CLN8-203ENST00000518780 DDNO94850 711 aaPredicted RBP11.43□□□□□ -0.58
CLN8-203ENST00000518780 PDE6AP16499 860 aa11.43□□□□□ -0.58
CLN8-203ENST00000518780 PLCG2P16885 1265 aa11.43□□□□□ -0.58
CLN8-203ENST00000518780 MFAP1P55081 439 aaKnown RBP11.43□□□□□ -0.58
CLN8-203ENST00000518780 PPP4CP60510 307 aa11.43□□□□□ -0.58
CLN8-203ENST00000518780 MAGEB6Q8N7X4 407 aa11.43□□□□□ -0.58
CLN8-203ENST00000518780 APPBP2Q92624 585 aa11.43□□□□□ -0.58
CLN8-203ENST00000518780 NOL10Q9BSC4 688 aaKnown RBP11.43□□□□□ -0.58
CLN8-203ENST00000518780 HELLSQ9NRZ9 838 aa11.43□□□□□ -0.58
CLN8-203ENST00000518780 DIAPH3Q9NSV4 1193 aa11.43□□□□□ -0.58
CLN8-203ENST00000518780 NDUFB9Q9Y6M9 179 aa11.43□□□□□ -0.58
CLN8-203ENST00000518780 MROH7-TTC4A0A0A0MT08 1334 aa11.42□□□□□ -0.58
CLN8-203ENST00000518780 GPR75-ASB3A0A0A6YYF3 556 aa11.42□□□□□ -0.58
CLN8-203ENST00000518780 TCRBV5S4A2TA0A5A2 114 aa11.42□□□□□ -0.58
CLN8-203ENST00000518780 CYP7A1P22680 504 aa11.42□□□□□ -0.58
CLN8-203ENST00000518780 CRKP46108 304 aa11.42□□□□□ -0.58
CLN8-203ENST00000518780 SCNN1DP51172 638 aa11.42□□□□□ -0.58
CLN8-203ENST00000518780 DLGAP5Q15398 846 aa11.42□□□□□ -0.58
CLN8-203ENST00000518780 PNMA8AQ86V59 439 aaPredicted RBP11.42□□□□□ -0.58
CLN8-203ENST00000518780 MICALL2Q8IY33 904 aa11.42□□□□□ -0.58
CLN8-203ENST00000518780 MXD3Q9BW11 206 aa11.42□□□□□ -0.58
CLN8-203ENST00000518780 ADARB2Q9NS39 739 aaKnown RBP11.42□□□□□ -0.58
CLN8-203ENST00000518780 HACL1Q9UJ83 578 aa11.42□□□□□ -0.58
CLN8-203ENST00000518780 ZNF532Q9HCE3 1301 aa11.41□□□□□ -0.58
CLN8-203ENST00000518780 F8W031 263 aaPredicted RBP11.41□□□□□ -0.58
CLN8-203ENST00000518780 MYO1BO43795 1136 aa11.41□□□□□ -0.58
CLN8-203ENST00000518780 CDC45O75419 566 aa11.41□□□□□ -0.58
CLN8-203ENST00000518780 GNAT2P19087 354 aa11.41□□□□□ -0.58
CLN8-203ENST00000518780 CHMLP26374 656 aa11.41□□□□□ -0.58
CLN8-203ENST00000518780 GRIK5Q16478 980 aa11.41□□□□□ -0.58
CLN8-203ENST00000518780 CFAP100Q494V2 611 aa11.41□□□□□ -0.58
CLN8-203ENST00000518780 ZMYM1Q5SVZ6 1142 aa11.41□□□□□ -0.58
CLN8-203ENST00000518780 USP50Q70EL3 339 aaPredicted RBP11.41□□□□□ -0.58
CLN8-203ENST00000518780 SKAP1Q86WV1 359 aa11.41□□□□□ -0.58
CLN8-203ENST00000518780 MYOZ2Q9NPC6 264 aa11.41□□□□□ -0.58
CLN8-203ENST00000518780 RPAP1Q9BWH6 1393 aaPredicted RBP11.41□□□□□ -0.58
CLN8-203ENST00000518780 DICER1Q9UPY3 1922 aaKnown RBP11.41□□□□□ -0.58
CLN8-203ENST00000518780 SBF1O95248 1867 aa11.4□□□□□ -0.58
CLN8-203ENST00000518780 RAD50Q92878 1312 aa11.4□□□□□ -0.58
CLN8-203ENST00000518780 SPDYE2BA6NHP3 402 aa11.4□□□□□ -0.58
CLN8-203ENST00000518780 SPDYE6P0CI01 402 aa11.4□□□□□ -0.58
CLN8-203ENST00000518780 VEGFAP15692 232 aaPredicted RBP11.4□□□□□ -0.58
CLN8-203ENST00000518780 RBM5P52756 815 aaKnown RBP eCLIP11.4□□□□□ -0.58
CLN8-203ENST00000518780 MCMDC2Q4G0Z9 681 aa11.4□□□□□ -0.58
CLN8-203ENST00000518780 FKBP1CQ5VVH2 108 aa11.4□□□□□ -0.58
CLN8-203ENST00000518780 APOBEC3HQ6NTF7 200 aaKnown RBP11.4□□□□□ -0.58
CLN8-203ENST00000518780 ZNF384Q8TF68 577 aa11.4□□□□□ -0.58
CLN8-203ENST00000518780 ZC3H15Q8WU90 426 aaKnown RBP11.4□□□□□ -0.58
CLN8-203ENST00000518780 AIDAQ96BJ3 306 aa11.4□□□□□ -0.58
CLN8-203ENST00000518780 ZBED3Q96IU2 234 aaPredicted RBP11.4□□□□□ -0.58
CLN8-203ENST00000518780 DAGLAQ9Y4D2 1042 aa11.4□□□□□ -0.58
CLN8-203ENST00000518780 AKAP11Q9UKA4 1901 aa11.4□□□□□ -0.58
CLN8-203ENST00000518780 MAGEB6P1A0A0J9YX57 407 aa11.39□□□□□ -0.59
CLN8-203ENST00000518780 DIXDC1Q155Q3 683 aa11.39□□□□□ -0.59
CLN8-203ENST00000518780 OSBP2Q969R2 916 aa11.39□□□□□ -0.59
CLN8-203ENST00000518780 SCN9AQ15858 1988 aa11.38□□□□□ -0.59
CLN8-203ENST00000518780 WNT10BO00744 389 aa11.38□□□□□ -0.59
CLN8-203ENST00000518780 EPB41L2O43491 1005 aaKnown RBP11.38□□□□□ -0.59
CLN8-203ENST00000518780 EPHX2P34913 555 aa11.38□□□□□ -0.59
CLN8-203ENST00000518780 EPS15P42566 896 aa11.38□□□□□ -0.59
CLN8-203ENST00000518780 BTDP43251 543 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms