RNA–Protein interactions for RNA: ENST00000518711.1

SPIDR-208, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 621 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-208ENST00000518711 LAMB1P07942 1786 aa7.29□□□□□ -1.24
SPIDR-208ENST00000518711 SGPL1O95470 568 aa7.29□□□□□ -1.24
SPIDR-208ENST00000518711 IREB2P48200 963 aaKnown RBP7.29□□□□□ -1.24
SPIDR-208ENST00000518711 CCT4P50991 539 aaKnown RBP7.29□□□□□ -1.24
SPIDR-208ENST00000518711 PRMT2P55345 433 aa7.29□□□□□ -1.24
SPIDR-208ENST00000518711 GOLGA2Q08379 1002 aa7.29□□□□□ -1.24
SPIDR-208ENST00000518711 RIC3Q7Z5B4 369 aa7.29□□□□□ -1.24
SPIDR-208ENST00000518711 HELBQ8NG08 1087 aaPredicted RBP7.29□□□□□ -1.24
SPIDR-208ENST00000518711 WNK4Q96J92 1243 aa7.29□□□□□ -1.24
SPIDR-208ENST00000518711 ANKRD2Q9GZV1 360 aa7.29□□□□□ -1.24
SPIDR-208ENST00000518711 RNF39Q9H2S5 420 aa7.29□□□□□ -1.24
SPIDR-208ENST00000518711 CWC25Q9NXE8 425 aaPredicted RBP7.29□□□□□ -1.24
SPIDR-208ENST00000518711 ZNF646O15015 1829 aaPredicted RBP7.29□□□□□ -1.24
SPIDR-208ENST00000518711 MYO1BO43795 1136 aa7.28□□□□□ -1.24
SPIDR-208ENST00000518711 WDHD1O75717 1129 aaPredicted RBP7.28□□□□□ -1.24
SPIDR-208ENST00000518711 DDX58O95786 925 aaKnown RBP7.28□□□□□ -1.24
SPIDR-208ENST00000518711 CNGB1Q14028 1251 aaPredicted RBP7.28□□□□□ -1.24
SPIDR-208ENST00000518711 RALBP1Q15311 655 aa7.28□□□□□ -1.24
SPIDR-208ENST00000518711 PRAMEF18Q5VWM3 479 aa7.28□□□□□ -1.24
SPIDR-208ENST00000518711 ANKRD13AQ8IZ07 590 aa7.28□□□□□ -1.24
SPIDR-208ENST00000518711 TTLL11Q8NHH1 800 aa7.28□□□□□ -1.24
SPIDR-208ENST00000518711 PAWRQ96IZ0 340 aaKnown RBP7.28□□□□□ -1.24
SPIDR-208ENST00000518711 FBXL18Q96ME1 805 aa7.28□□□□□ -1.24
SPIDR-208ENST00000518711 METTL22Q9BUU2 404 aaPredicted RBP7.28□□□□□ -1.24
SPIDR-208ENST00000518711 PLA2G12BQ9BX93 195 aa7.28□□□□□ -1.24
SPIDR-208ENST00000518711 ANGEL1Q9UNK9 670 aaKnown RBP7.28□□□□□ -1.24
SPIDR-208ENST00000518711 ZNF804BA4D1E1 1349 aa7.27□□□□□ -1.24
SPIDR-208ENST00000518711 FAM205AQ6ZU69 1335 aa7.27□□□□□ -1.24
SPIDR-208ENST00000518711 TFRCP02786 760 aaKnown RBP7.27□□□□□ -1.25
SPIDR-208ENST00000518711 ZNF853P0CG23 659 aa7.27□□□□□ -1.25
SPIDR-208ENST00000518711 CTSWP56202 376 aa7.27□□□□□ -1.25
SPIDR-208ENST00000518711 CALD1Q05682 793 aaKnown RBP7.27□□□□□ -1.25
SPIDR-208ENST00000518711 C1QBPQ07021 282 aaKnown RBP7.27□□□□□ -1.25
SPIDR-208ENST00000518711 TNFAIP1Q13829 316 aa7.27□□□□□ -1.25
SPIDR-208ENST00000518711 DLGAP5Q15398 846 aa7.27□□□□□ -1.25
SPIDR-208ENST00000518711 DUSP27Q5VZP5 1158 aa7.27□□□□□ -1.25
SPIDR-208ENST00000518711 NECAB2Q7Z6G3 386 aa7.27□□□□□ -1.25
SPIDR-208ENST00000518711 PPM1EQ8WY54 764 aa7.27□□□□□ -1.25
SPIDR-208ENST00000518711 MS4A4AQ96JQ5 239 aa7.27□□□□□ -1.25
SPIDR-208ENST00000518711 KCNH6Q9H252 994 aa7.27□□□□□ -1.25
SPIDR-208ENST00000518711 TRIM35Q9UPQ4 493 aa7.27□□□□□ -1.25
SPIDR-208ENST00000518711 EPG5Q9HCE0 2579 aa7.26□□□□□ -1.25
SPIDR-208ENST00000518711 SPDYE4A6NLX3 237 aa7.26□□□□□ -1.25
SPIDR-208ENST00000518711 PRR33A8MZF0 331 aa7.26□□□□□ -1.25
SPIDR-208ENST00000518711 USP2O75604 605 aaPredicted RBP7.26□□□□□ -1.25
SPIDR-208ENST00000518711 BMP1P13497 986 aa7.26□□□□□ -1.25
SPIDR-208ENST00000518711 GRK4P32298 578 aa7.26□□□□□ -1.25
SPIDR-208ENST00000518711 GTF2A2P52657 109 aa7.26□□□□□ -1.25
SPIDR-208ENST00000518711 MDM2Q00987 491 aaPredicted RBP7.26□□□□□ -1.25
SPIDR-208ENST00000518711 RUNDC1Q96C34 613 aa7.26□□□□□ -1.25
SPIDR-208ENST00000518711 PTPN18Q99952 460 aa7.26□□□□□ -1.25
SPIDR-208ENST00000518711 ZFYVE28Q9HCC9 887 aa7.26□□□□□ -1.25
SPIDR-208ENST00000518711 BIN2Q9UBW5 565 aaPredicted RBP7.26□□□□□ -1.25
SPIDR-208ENST00000518711 FBXO3Q9UK99 471 aa7.26□□□□□ -1.25
SPIDR-208ENST00000518711 SPDYE2BA6NHP3 402 aa7.25□□□□□ -1.25
SPIDR-208ENST00000518711 H7C1W4 665 aa7.25□□□□□ -1.25
SPIDR-208ENST00000518711 CSF1RP07333 972 aa7.25□□□□□ -1.25
SPIDR-208ENST00000518711 SPDYE6P0CI01 402 aa7.25□□□□□ -1.25
SPIDR-208ENST00000518711 IL1R1P14778 569 aa7.25□□□□□ -1.25
SPIDR-208ENST00000518711 IGHMBP2P38935 993 aaKnown RBP7.25□□□□□ -1.25
SPIDR-208ENST00000518711 UBXN2AP68543 259 aa7.25□□□□□ -1.25
SPIDR-208ENST00000518711 KIF22Q14807 665 aa7.25□□□□□ -1.25
SPIDR-208ENST00000518711 ACAP1Q15027 740 aa7.25□□□□□ -1.25
SPIDR-208ENST00000518711 KRT24Q2M2I5 525 aa7.25□□□□□ -1.25
SPIDR-208ENST00000518711 RTL5Q5HYW3 569 aaPredicted RBP7.25□□□□□ -1.25
SPIDR-208ENST00000518711 CCDC30Q5VVM6 783 aa7.25□□□□□ -1.25
SPIDR-208ENST00000518711 KSR2Q6VAB6 950 aa7.25□□□□□ -1.25
SPIDR-208ENST00000518711 KIAA0825Q8IV33 1275 aa7.25□□□□□ -1.25
SPIDR-208ENST00000518711 MRIQ9BWK5 157 aa7.25□□□□□ -1.25
SPIDR-208ENST00000518711 CD209Q9NNX6 404 aa7.25□□□□□ -1.25
SPIDR-208ENST00000518711 SPINK5Q9NQ38 1064 aaPredicted RBP7.25□□□□□ -1.25
SPIDR-208ENST00000518711 IFT57Q9NWB7 429 aa7.25□□□□□ -1.25
SPIDR-208ENST00000518711 DACH1Q9UI36 760 aa7.25□□□□□ -1.25
SPIDR-208ENST00000518711 CFAP54Q96N23 3096 aa7.25□□□□□ -1.25
SPIDR-208ENST00000518711 ALPK3Q96L96 1907 aa7.25□□□□□ -1.25
SPIDR-208ENST00000518711 CDH23Q9H251 3354 aa7.24□□□□□ -1.25
SPIDR-208ENST00000518711 TLR2O60603 784 aa7.24□□□□□ -1.25
SPIDR-208ENST00000518711 SASH1O94885 1247 aa7.24□□□□□ -1.25
SPIDR-208ENST00000518711 HOXD10P28358 340 aa7.24□□□□□ -1.25
SPIDR-208ENST00000518711 GNAI1P63096 354 aa7.24□□□□□ -1.25
SPIDR-208ENST00000518711 GTF2IP78347 998 aa7.24□□□□□ -1.25
SPIDR-208ENST00000518711 MAP3K9P80192 1104 aa7.24□□□□□ -1.25
SPIDR-208ENST00000518711 NEXNQ0ZGT2 675 aa7.24□□□□□ -1.25
SPIDR-208ENST00000518711 TXNRD3Q86VQ6 643 aa7.24□□□□□ -1.25
SPIDR-208ENST00000518711 HOOK2Q96ED9 719 aa7.24□□□□□ -1.25
SPIDR-208ENST00000518711 CLMNQ96JQ2 1002 aa7.24□□□□□ -1.25
SPIDR-208ENST00000518711 TRIM47Q96LD4 638 aa7.24□□□□□ -1.25
SPIDR-208ENST00000518711 PHOX2BQ99453 314 aa7.24□□□□□ -1.25
SPIDR-208ENST00000518711 MYD88Q99836 296 aa7.24□□□□□ -1.25
SPIDR-208ENST00000518711 ARHGAP39Q9C0H5 1083 aa7.24□□□□□ -1.25
SPIDR-208ENST00000518711 GREM2Q9H772 168 aa7.24□□□□□ -1.25
SPIDR-208ENST00000518711 SERPINA10Q9UK55 444 aa7.24□□□□□ -1.25
SPIDR-208ENST00000518711 RIPOR2Q9Y4F9 1068 aa7.24□□□□□ -1.25
SPIDR-208ENST00000518711 COL4A1P02462 1669 aa7.24□□□□□ -1.25
SPIDR-208ENST00000518711 SSC5DA1L4H1 1573 aa7.24□□□□□ -1.25
SPIDR-208ENST00000518711 SPTBN4Q9H254 2564 aa7.23□□□□□ -1.25
SPIDR-208ENST00000518711 IGKV5-2P06315 115 aa7.23□□□□□ -1.25
SPIDR-208ENST00000518711 CETPP11597 493 aa7.23□□□□□ -1.25
SPIDR-208ENST00000518711 GJA5P36382 358 aa7.23□□□□□ -1.25
SPIDR-208ENST00000518711 LACTBP83111 547 aaPredicted RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms