RNA–Protein interactions for RNA: ENST00000517785.1

LINC00535-202, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 264 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-202ENST00000517785 MPNDQ8N594 471 aa7.58□□□□□ -1.2
LINC00535-202ENST00000517785 KCNQ5Q9NR82 932 aa7.58□□□□□ -1.2
LINC00535-202ENST00000517785 TOR4AQ9NXH8 423 aa7.58□□□□□ -1.2
LINC00535-202ENST00000517785 DUOX1Q9NRD9 1551 aa7.58□□□□□ -1.2
LINC00535-202ENST00000517785 LAMA3Q16787 3333 aa7.57□□□□□ -1.2
LINC00535-202ENST00000517785 SCN9AQ15858 1988 aa7.57□□□□□ -1.2
LINC00535-202ENST00000517785 H0YGN5 161 aa7.57□□□□□ -1.2
LINC00535-202ENST00000517785 U2SURPO15042 1029 aaKnown RBP7.57□□□□□ -1.2
LINC00535-202ENST00000517785 DIAPH1O60610 1272 aaKnown RBP7.57□□□□□ -1.2
LINC00535-202ENST00000517785 NTSR2O95665 410 aa7.57□□□□□ -1.2
LINC00535-202ENST00000517785 PRAMEF18Q5VWM3 479 aa7.57□□□□□ -1.2
LINC00535-202ENST00000517785 GAS2L2Q8NHY3 880 aa7.57□□□□□ -1.2
LINC00535-202ENST00000517785 ZNF428Q96B54 188 aa7.57□□□□□ -1.2
LINC00535-202ENST00000517785 RTFDC1Q9BY42 306 aaPredicted RBP7.57□□□□□ -1.2
LINC00535-202ENST00000517785 VPS33BQ9H267 617 aa7.57□□□□□ -1.2
LINC00535-202ENST00000517785 CEMIPQ8WUJ3 1361 aa7.57□□□□□ -1.2
LINC00535-202ENST00000517785 LAMB4A4D0S4 1761 aa7.56□□□□□ -1.2
LINC00535-202ENST00000517785 MAP3K15Q6ZN16 1313 aa7.56□□□□□ -1.2
LINC00535-202ENST00000517785 MYCP01106 439 aaPredicted RBP7.56□□□□□ -1.2
LINC00535-202ENST00000517785 MYL6BP14649 208 aa7.56□□□□□ -1.2
LINC00535-202ENST00000517785 CD46P15529 392 aa7.56□□□□□ -1.2
LINC00535-202ENST00000517785 CNGB1Q14028 1251 aaPredicted RBP7.56□□□□□ -1.2
LINC00535-202ENST00000517785 TTLL12Q14166 644 aaPredicted RBP7.56□□□□□ -1.2
LINC00535-202ENST00000517785 ANGEL2Q5VTE6 544 aaKnown RBP7.56□□□□□ -1.2
LINC00535-202ENST00000517785 KIF6Q6ZMV9 814 aa7.56□□□□□ -1.2
LINC00535-202ENST00000517785 MCM10Q7L590 875 aa7.56□□□□□ -1.2
LINC00535-202ENST00000517785 OTOP1Q7RTM1 612 aa7.56□□□□□ -1.2
LINC00535-202ENST00000517785 DPF2Q92785 391 aa7.56□□□□□ -1.2
LINC00535-202ENST00000517785 NLRP3Q96P20 1036 aa7.56□□□□□ -1.2
LINC00535-202ENST00000517785 RRP7AQ9Y3A4 280 aaKnown RBP7.56□□□□□ -1.2
LINC00535-202ENST00000517785 RTL9Q8NET4 1388 aa7.56□□□□□ -1.2
LINC00535-202ENST00000517785 HCLS1P14317 486 aaPredicted RBP7.55□□□□□ -1.2
LINC00535-202ENST00000517785 MAP2K5Q13163 448 aa7.55□□□□□ -1.2
LINC00535-202ENST00000517785 PRKG1Q13976 671 aa7.55□□□□□ -1.2
LINC00535-202ENST00000517785 SCARF1Q14162 830 aa7.55□□□□□ -1.2
LINC00535-202ENST00000517785 DCTN1Q14203 1278 aa7.55□□□□□ -1.2
LINC00535-202ENST00000517785 SP8Q8IXZ3 490 aa7.55□□□□□ -1.2
LINC00535-202ENST00000517785 MIS18AQ9NYP9 233 aa7.55□□□□□ -1.2
LINC00535-202ENST00000517785 IBTKQ9P2D0 1353 aaPredicted RBP7.55□□□□□ -1.2
LINC00535-202ENST00000517785 ECE2O60344 883 aa7.54□□□□□ -1.2
LINC00535-202ENST00000517785 AVPP01185 164 aa7.54□□□□□ -1.2
LINC00535-202ENST00000517785 INTS3Q68E01 1043 aaKnown RBP7.54□□□□□ -1.2
LINC00535-202ENST00000517785 CYP4X1Q8N118 509 aa7.54□□□□□ -1.2
LINC00535-202ENST00000517785 CRIPAKQ8N1N5 446 aa7.54□□□□□ -1.2
LINC00535-202ENST00000517785 CD99L2Q8TCZ2 262 aa7.54□□□□□ -1.2
LINC00535-202ENST00000517785 PHACTR3Q96KR7 559 aa7.54□□□□□ -1.2
LINC00535-202ENST00000517785 KNSTRNQ9Y448 316 aa7.54□□□□□ -1.2
LINC00535-202ENST00000517785 ANKRD36CQ5JPF3 1778 aa7.54□□□□□ -1.2
LINC00535-202ENST00000517785 KDM3BQ7LBC6 1761 aa7.54□□□□□ -1.2
LINC00535-202ENST00000517785 DDX60Q8IY21 1712 aaKnown RBP7.53□□□□□ -1.2
LINC00535-202ENST00000517785 ERVV-1B6SEH8 477 aa7.53□□□□□ -1.2
LINC00535-202ENST00000517785 C6orf229H3BNL8 230 aa7.53□□□□□ -1.2
LINC00535-202ENST00000517785 ZBTB24O43167 697 aaPredicted RBP7.53□□□□□ -1.2
LINC00535-202ENST00000517785 BBOX1O75936 387 aa7.53□□□□□ -1.2
LINC00535-202ENST00000517785 RPS12P25398 132 aaKnown RBP7.53□□□□□ -1.2
LINC00535-202ENST00000517785 TM4SF4P48230 202 aa7.53□□□□□ -1.2
LINC00535-202ENST00000517785 MMP16P51512 607 aa7.53□□□□□ -1.2
LINC00535-202ENST00000517785 GRAPQ13588 217 aa7.53□□□□□ -1.2
LINC00535-202ENST00000517785 WASHC4Q2M389 1173 aa7.53□□□□□ -1.2
LINC00535-202ENST00000517785 Q3C1V9 767 aa7.53□□□□□ -1.2
LINC00535-202ENST00000517785 DDX46Q7L014 1031 aaKnown RBP7.53□□□□□ -1.2
LINC00535-202ENST00000517785 PPP1R42Q7Z4L9 355 aa7.53□□□□□ -1.2
LINC00535-202ENST00000517785 ZNF34Q8IZ26 560 aa7.53□□□□□ -1.2
LINC00535-202ENST00000517785 GRAPLQ8TC17 118 aaPredicted RBP7.53□□□□□ -1.2
LINC00535-202ENST00000517785 DACH1Q9UI36 760 aa7.53□□□□□ -1.2
LINC00535-202ENST00000517785 FZD1Q9UP38 647 aa7.53□□□□□ -1.2
LINC00535-202ENST00000517785 PTPN22Q9Y2R2 807 aa7.53□□□□□ -1.2
LINC00535-202ENST00000517785 COL4A1P02462 1669 aa7.53□□□□□ -1.2
LINC00535-202ENST00000517785 LRRC37AA6NMS7 1700 aa7.52□□□□□ -1.2
LINC00535-202ENST00000517785 COL3A1P02461 1466 aaPredicted RBP7.52□□□□□ -1.21
LINC00535-202ENST00000517785 IRF6O14896 467 aa7.52□□□□□ -1.21
LINC00535-202ENST00000517785 KDM4AO75164 1064 aa7.52□□□□□ -1.21
LINC00535-202ENST00000517785 PRKAR2BP31323 418 aa7.52□□□□□ -1.21
LINC00535-202ENST00000517785 FKBP1BP68106 108 aa7.52□□□□□ -1.21
LINC00535-202ENST00000517785 CAP1Q01518 475 aa7.52□□□□□ -1.21
LINC00535-202ENST00000517785 SREBF2Q12772 1141 aa7.52□□□□□ -1.21
LINC00535-202ENST00000517785 NOM1Q5C9Z4 860 aaKnown RBP7.52□□□□□ -1.21
LINC00535-202ENST00000517785 CC2D1BQ5T0F9 858 aaKnown RBP7.52□□□□□ -1.21
LINC00535-202ENST00000517785 RTF1Q92541 710 aaKnown RBP7.52□□□□□ -1.21
LINC00535-202ENST00000517785 THUMPD2Q9BTF0 503 aaKnown RBP7.52□□□□□ -1.21
LINC00535-202ENST00000517785 UTP14AQ9BVJ6 771 aaKnown RBP7.52□□□□□ -1.21
LINC00535-202ENST00000517785 POLLQ9UGP5 575 aa7.52□□□□□ -1.21
LINC00535-202ENST00000517785 NSFL1CQ9UNZ2 370 aaKnown RBP7.52□□□□□ -1.21
LINC00535-202ENST00000517785 ZNF609O15014 1411 aa7.52□□□□□ -1.21
LINC00535-202ENST00000517785 VCANP13611 3396 aa7.51□□□□□ -1.21
LINC00535-202ENST00000517785 GPSM2P81274 684 aa7.51□□□□□ -1.21
LINC00535-202ENST00000517785 PTPN12Q05209 780 aaKnown RBP7.51□□□□□ -1.21
LINC00535-202ENST00000517785 SLC4A8Q2Y0W8 1093 aa7.51□□□□□ -1.21
LINC00535-202ENST00000517785 GIGYF2Q6Y7W6 1299 aaKnown RBP7.51□□□□□ -1.21
LINC00535-202ENST00000517785 ARMC5Q96C12 935 aa7.51□□□□□ -1.21
LINC00535-202ENST00000517785 UNC80Q8N2C7 3258 aa7.51□□□□□ -1.21
LINC00535-202ENST00000517785 IGF2BP3O00425 579 aaKnown RBP eCLIP7.5□□□□□ -1.21
LINC00535-202ENST00000517785 SOX1O00570 391 aaPredicted RBP7.5□□□□□ -1.21
LINC00535-202ENST00000517785 ANXA1P04083 346 aa7.5□□□□□ -1.21
LINC00535-202ENST00000517785 MDM2Q00987 491 aaPredicted RBP7.5□□□□□ -1.21
LINC00535-202ENST00000517785 TRIM32Q13049 653 aa7.5□□□□□ -1.21
LINC00535-202ENST00000517785 TCIRG1Q13488 830 aa7.5□□□□□ -1.21
LINC00535-202ENST00000517785 CTC1Q2NKJ3 1217 aa7.5□□□□□ -1.21
LINC00535-202ENST00000517785 PARP10Q53GL7 1025 aa7.5□□□□□ -1.21
LINC00535-202ENST00000517785 SLC10A5Q5PT55 438 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms