RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 ZBED3Q96IU2 234 aaPredicted RBP12.03□□□□□ -0.48
CLN8-202ENST00000517514 ABCF2Q9UG63 623 aa12.03□□□□□ -0.48
CLN8-202ENST00000517514 POLR2AP24928 1970 aaKnown RBP12.02□□□□□ -0.49
CLN8-202ENST00000517514 F8W031 263 aaPredicted RBP12.02□□□□□ -0.49
CLN8-202ENST00000517514 SDSP20132 328 aa12.02□□□□□ -0.49
CLN8-202ENST00000517514 RPS12P25398 132 aaKnown RBP12.02□□□□□ -0.49
CLN8-202ENST00000517514 MECOMQ03112 1051 aa12.02□□□□□ -0.49
CLN8-202ENST00000517514 DIXDC1Q155Q3 683 aa12.02□□□□□ -0.49
CLN8-202ENST00000517514 KBTBD3Q8NAB2 608 aa12.02□□□□□ -0.49
CLN8-202ENST00000517514 GPRC5DQ9NZD1 345 aa12.02□□□□□ -0.49
CLN8-202ENST00000517514 SUGT1Q9Y2Z0 365 aa12.02□□□□□ -0.49
CLN8-202ENST00000517514 MYO3BQ8WXR4 1341 aa12.02□□□□□ -0.49
CLN8-202ENST00000517514 FOCADQ5VW36 1801 aa12.02□□□□□ -0.49
CLN8-202ENST00000517514 LDHBP07195 334 aaKnown RBP12.01□□□□□ -0.49
CLN8-202ENST00000517514 PDE6AP16499 860 aa12.01□□□□□ -0.49
CLN8-202ENST00000517514 HIRAP54198 1017 aaPredicted RBP12.01□□□□□ -0.49
CLN8-202ENST00000517514 ERICH6Q7L0X2 663 aa12.01□□□□□ -0.49
CLN8-202ENST00000517514 MICALL2Q8IY33 904 aa12.01□□□□□ -0.49
CLN8-202ENST00000517514 CNOT7Q9UIV1 285 aaKnown RBP12.01□□□□□ -0.49
CLN8-202ENST00000517514 TTF2Q9UNY4 1162 aaKnown RBP12.01□□□□□ -0.49
CLN8-202ENST00000517514 GAKO14976 1311 aa12.01□□□□□ -0.49
CLN8-202ENST00000517514 IDH1O75874 414 aaKnown RBP12□□□□□ -0.49
CLN8-202ENST00000517514 USP17L8P0C7I0 530 aa12□□□□□ -0.49
CLN8-202ENST00000517514 ADD2P35612 726 aa12□□□□□ -0.49
CLN8-202ENST00000517514 CRKP46108 304 aa12□□□□□ -0.49
CLN8-202ENST00000517514 TTF1Q15361 905 aaPredicted RBP12□□□□□ -0.49
CLN8-202ENST00000517514 DPY19L2Q6NUT2 758 aa12□□□□□ -0.49
CLN8-202ENST00000517514 SAMD7Q7Z3H4 446 aa12□□□□□ -0.49
CLN8-202ENST00000517514 ZGPATQ8N5A5 531 aaKnown RBP12□□□□□ -0.49
CLN8-202ENST00000517514 TRPM4Q8TD43 1214 aa12□□□□□ -0.49
CLN8-202ENST00000517514 EVI5LQ96CN4 794 aa12□□□□□ -0.49
CLN8-202ENST00000517514 FAM163AQ96GL9 167 aaPredicted RBP12□□□□□ -0.49
CLN8-202ENST00000517514 MRIQ9BWK5 157 aa12□□□□□ -0.49
CLN8-202ENST00000517514 LRP2BPQ9P2M1 347 aa12□□□□□ -0.49
CLN8-202ENST00000517514 DAGLAQ9Y4D2 1042 aa12□□□□□ -0.49
CLN8-202ENST00000517514 ASTN2O75129 1339 aaPredicted RBP12□□□□□ -0.49
CLN8-202ENST00000517514 HDLBPQ00341 1268 aaKnown RBP11.99□□□□□ -0.49
CLN8-202ENST00000517514 BMP2KLQ5H9B9 411 aa11.99□□□□□ -0.49
CLN8-202ENST00000517514 SPTY2D1Q68D10 685 aaPredicted RBP11.99□□□□□ -0.49
CLN8-202ENST00000517514 APOBEC3HQ6NTF7 200 aaKnown RBP11.99□□□□□ -0.49
CLN8-202ENST00000517514 HHIPL2Q6UWX4 724 aa11.99□□□□□ -0.49
CLN8-202ENST00000517514 MAGEB6Q8N7X4 407 aa11.99□□□□□ -0.49
CLN8-202ENST00000517514 MTMR14Q8NCE2 650 aa11.99□□□□□ -0.49
CLN8-202ENST00000517514 PRMT6Q96LA8 375 aaPredicted RBP11.99□□□□□ -0.49
CLN8-202ENST00000517514 IL25Q9H293 177 aa11.99□□□□□ -0.49
CLN8-202ENST00000517514 NMRK2Q9NPI5 230 aa11.99□□□□□ -0.49
CLN8-202ENST00000517514 RAI14Q9P0K7 980 aa11.99□□□□□ -0.49
CLN8-202ENST00000517514 ZNF532Q9HCE3 1301 aa11.99□□□□□ -0.49
CLN8-202ENST00000517514 RFX7Q2KHR2 1363 aa11.98□□□□□ -0.49
CLN8-202ENST00000517514 MROH7-TTC4A0A0A0MT08 1334 aa11.98□□□□□ -0.49
CLN8-202ENST00000517514 TRIM6-TRIM34B2RNG4 842 aa11.98□□□□□ -0.49
CLN8-202ENST00000517514 RHBDL3P58872 404 aa11.98□□□□□ -0.49
CLN8-202ENST00000517514 NBPF9Q3BBW0 867 aa11.98□□□□□ -0.49
CLN8-202ENST00000517514 CFAP100Q494V2 611 aa11.98□□□□□ -0.49
CLN8-202ENST00000517514 TBC1D10BQ4KMP7 808 aaPredicted RBP11.98□□□□□ -0.49
CLN8-202ENST00000517514 SLC9C2Q5TAH2 1124 aa11.98□□□□□ -0.49
CLN8-202ENST00000517514 DZIP1Q86YF9 867 aaKnown RBP11.98□□□□□ -0.49
CLN8-202ENST00000517514 OSBP2Q969R2 916 aa11.98□□□□□ -0.49
CLN8-202ENST00000517514 RILPL2Q969X0 211 aa11.98□□□□□ -0.49
CLN8-202ENST00000517514 ZDHHC15Q96MV8 337 aa11.98□□□□□ -0.49
CLN8-202ENST00000517514 SEC62Q99442 399 aaKnown RBP11.98□□□□□ -0.49
CLN8-202ENST00000517514 RIOK1Q9BRS2 568 aaKnown RBP11.98□□□□□ -0.49
CLN8-202ENST00000517514 TAF1DQ9H5J8 278 aaPredicted RBP11.98□□□□□ -0.49
CLN8-202ENST00000517514 RRAGCQ9HB90 399 aa11.98□□□□□ -0.49
CLN8-202ENST00000517514 MYOZ2Q9NPC6 264 aa11.98□□□□□ -0.49
CLN8-202ENST00000517514 SERPINA10Q9UK55 444 aa11.98□□□□□ -0.49
CLN8-202ENST00000517514 DDX60LQ5H9U9 1706 aaKnown RBP11.97□□□□□ -0.49
CLN8-202ENST00000517514 GPR75-ASB3A0A0A6YYF3 556 aa11.97□□□□□ -0.49
CLN8-202ENST00000517514 A0A0D9SFI3 127 aa11.97□□□□□ -0.49
CLN8-202ENST00000517514 SPDYE2BA6NHP3 402 aa11.97□□□□□ -0.49
CLN8-202ENST00000517514 WNT10BO00744 389 aa11.97□□□□□ -0.49
CLN8-202ENST00000517514 RNF113AO15541 343 aaKnown RBP11.97□□□□□ -0.49
CLN8-202ENST00000517514 IGSF3O75054 1194 aa11.97□□□□□ -0.49
CLN8-202ENST00000517514 POTEIP0CG38 1075 aa11.97□□□□□ -0.49
CLN8-202ENST00000517514 POTEJP0CG39 1038 aa11.97□□□□□ -0.49
CLN8-202ENST00000517514 SPDYE6P0CI01 402 aa11.97□□□□□ -0.49
CLN8-202ENST00000517514 CYP7A1P22680 504 aa11.97□□□□□ -0.49
CLN8-202ENST00000517514 DYNLL1P63167 89 aaKnown RBP11.97□□□□□ -0.49
CLN8-202ENST00000517514 MAP3K12Q12852 859 aa11.97□□□□□ -0.49
CLN8-202ENST00000517514 UBE3CQ15386 1083 aa11.97□□□□□ -0.49
CLN8-202ENST00000517514 ZMYM1Q5SVZ6 1142 aa11.97□□□□□ -0.49
CLN8-202ENST00000517514 NAA16Q6N069 864 aaPredicted RBP11.97□□□□□ -0.49
CLN8-202ENST00000517514 CNTROBQ8N137 903 aa11.97□□□□□ -0.49
CLN8-202ENST00000517514 ZNF526Q8TF50 670 aaPredicted RBP11.97□□□□□ -0.49
CLN8-202ENST00000517514 TEKT1Q969V4 418 aa11.97□□□□□ -0.49
CLN8-202ENST00000517514 FAM227BQ96M60 508 aa11.97□□□□□ -0.49
CLN8-202ENST00000517514 FSD1Q9BTV5 496 aa11.97□□□□□ -0.49
CLN8-202ENST00000517514 PUS7LQ9H0K6 701 aaKnown RBP11.97□□□□□ -0.49
CLN8-202ENST00000517514 HACL1Q9UJ83 578 aa11.97□□□□□ -0.49
CLN8-202ENST00000517514 MAST3O60307 1309 aa11.96□□□□□ -0.49
CLN8-202ENST00000517514 M0R2C6 588 aa11.96□□□□□ -0.49
CLN8-202ENST00000517514 FOXP2O15409 715 aa11.96□□□□□ -0.49
CLN8-202ENST00000517514 CHMLP26374 656 aa11.96□□□□□ -0.49
CLN8-202ENST00000517514 EPHX2P34913 555 aa11.96□□□□□ -0.49
CLN8-202ENST00000517514 MMP14P50281 582 aa11.96□□□□□ -0.49
CLN8-202ENST00000517514 PPP4CP60510 307 aa11.96□□□□□ -0.49
CLN8-202ENST00000517514 NMIQ13287 307 aaPredicted RBP11.96□□□□□ -0.49
CLN8-202ENST00000517514 KIF4BQ2VIQ3 1234 aa11.96□□□□□ -0.49
CLN8-202ENST00000517514 RBM26Q5T8P6 1007 aaKnown RBP11.96□□□□□ -0.49
CLN8-202ENST00000517514 CDC42EP5Q6NZY7 148 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms