RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 MYSM1Q5VVJ2 828 aa7.61□□□□□ -1.19
CPNE3-203ENST00000517490 MLKLQ8NB16 471 aa7.61□□□□□ -1.19
CPNE3-203ENST00000517490 NEK11Q8NG66 645 aa7.61□□□□□ -1.19
CPNE3-203ENST00000517490 CWC25Q9NXE8 425 aaPredicted RBP7.61□□□□□ -1.19
CPNE3-203ENST00000517490 MKRN1Q9UHC7 482 aaKnown RBP7.61□□□□□ -1.19
CPNE3-203ENST00000517490 USP42Q9H9J4 1324 aaKnown RBP7.61□□□□□ -1.19
CPNE3-203ENST00000517490 VGLL3A8MV65 326 aa7.6□□□□□ -1.19
CPNE3-203ENST00000517490 ARID5BQ14865 1188 aa7.6□□□□□ -1.19
CPNE3-203ENST00000517490 TTF1Q15361 905 aaPredicted RBP7.6□□□□□ -1.19
CPNE3-203ENST00000517490 SPA17Q15506 151 aa7.6□□□□□ -1.19
CPNE3-203ENST00000517490 LMBR1LQ6UX01 489 aa7.6□□□□□ -1.19
CPNE3-203ENST00000517490 MICALCLQ6ZW33 695 aa7.6□□□□□ -1.19
CPNE3-203ENST00000517490 NSUN7Q8NE18 718 aaKnown RBP7.6□□□□□ -1.19
CPNE3-203ENST00000517490 IP6K1Q92551 441 aa7.6□□□□□ -1.19
CPNE3-203ENST00000517490 SLC26A6Q9BXS9 759 aa7.6□□□□□ -1.19
CPNE3-203ENST00000517490 TTF2Q9UNY4 1162 aaKnown RBP7.6□□□□□ -1.19
CPNE3-203ENST00000517490 CRB1P82279 1406 aa7.6□□□□□ -1.19
CPNE3-203ENST00000517490 ATP5J2-PTCD1G3V325 749 aa7.6□□□□□ -1.19
CPNE3-203ENST00000517490 PTCD1O75127 700 aaKnown RBP7.6□□□□□ -1.19
CPNE3-203ENST00000517490 BMP15O95972 392 aa7.6□□□□□ -1.19
CPNE3-203ENST00000517490 TDO2P48775 406 aa7.6□□□□□ -1.19
CPNE3-203ENST00000517490 NDUFA8P51970 172 aa7.6□□□□□ -1.19
CPNE3-203ENST00000517490 MTX1Q13505 466 aa7.6□□□□□ -1.19
CPNE3-203ENST00000517490 DBNDD2Q9BQY9 259 aa7.6□□□□□ -1.19
CPNE3-203ENST00000517490 NAA15Q9BXJ9 866 aaKnown RBP7.6□□□□□ -1.19
CPNE3-203ENST00000517490 NAPBQ9H115 298 aa7.6□□□□□ -1.19
CPNE3-203ENST00000517490 KCNH3Q9ULD8 1083 aa7.6□□□□□ -1.19
CPNE3-203ENST00000517490 SALL3Q9BXA9 1300 aa7.6□□□□□ -1.19
CPNE3-203ENST00000517490 WDHD1O75717 1129 aaPredicted RBP7.6□□□□□ -1.19
CPNE3-203ENST00000517490 PFKFB1P16118 471 aa7.6□□□□□ -1.19
CPNE3-203ENST00000517490 SPECC1LQ69YQ0 1117 aa7.6□□□□□ -1.19
CPNE3-203ENST00000517490 NEXMIFQ5QGS0 1516 aa7.6□□□□□ -1.19
CPNE3-203ENST00000517490 E7EWF7 191 aa7.6□□□□□ -1.19
CPNE3-203ENST00000517490 RHOXF2BP0C7M4 288 aa7.6□□□□□ -1.19
CPNE3-203ENST00000517490 TOB2Q14106 344 aaPredicted RBP7.6□□□□□ -1.19
CPNE3-203ENST00000517490 METTL24Q5JXM2 366 aa7.6□□□□□ -1.19
CPNE3-203ENST00000517490 ZFP91Q96JP5 570 aaPredicted RBP7.6□□□□□ -1.19
CPNE3-203ENST00000517490 RHOXF2Q9BQY4 288 aa7.6□□□□□ -1.19
CPNE3-203ENST00000517490 LGR6Q9HBX8 967 aa7.6□□□□□ -1.19
CPNE3-203ENST00000517490 SNRKQ9NRH2 765 aa7.6□□□□□ -1.19
CPNE3-203ENST00000517490 ALKQ9UM73 1620 aa7.59□□□□□ -1.19
CPNE3-203ENST00000517490 AK9Q5TCS8 1911 aa7.59□□□□□ -1.19
CPNE3-203ENST00000517490 USP27XA6NNY8 438 aa7.59□□□□□ -1.19
CPNE3-203ENST00000517490 DPCR1Q3MIW9 517 aa7.59□□□□□ -1.19
CPNE3-203ENST00000517490 NAPGQ99747 312 aaPredicted RBP7.59□□□□□ -1.19
CPNE3-203ENST00000517490 BPIFA3Q9BQP9 254 aa7.59□□□□□ -1.19
CPNE3-203ENST00000517490 METTL22Q9BUU2 404 aaPredicted RBP7.59□□□□□ -1.19
CPNE3-203ENST00000517490 MARCH6O60337 910 aa7.59□□□□□ -1.19
CPNE3-203ENST00000517490 STX10O60499 249 aa7.59□□□□□ -1.19
CPNE3-203ENST00000517490 USO1O60763 962 aaKnown RBP7.59□□□□□ -1.19
CPNE3-203ENST00000517490 KCNJ6P48051 423 aa7.59□□□□□ -1.19
CPNE3-203ENST00000517490 HNRNPH2P55795 449 aaKnown RBP7.59□□□□□ -1.19
CPNE3-203ENST00000517490 OTUD7BQ6GQQ9 843 aa7.59□□□□□ -1.19
CPNE3-203ENST00000517490 KLHDC4Q8TBB5 520 aa7.59□□□□□ -1.19
CPNE3-203ENST00000517490 POLR3EQ9NVU0 708 aa7.59□□□□□ -1.19
CPNE3-203ENST00000517490 PPM1EQ8WY54 764 aa7.59□□□□□ -1.19
CPNE3-203ENST00000517490 EXOC4Q96A65 974 aa7.59□□□□□ -1.19
CPNE3-203ENST00000517490 IL17RAQ96F46 866 aa7.59□□□□□ -1.19
CPNE3-203ENST00000517490 USP6P35125 1406 aa7.59□□□□□ -1.19
CPNE3-203ENST00000517490 CAMSAP1Q5T5Y3 1602 aa7.59□□□□□ -1.19
CPNE3-203ENST00000517490 AGLP35573 1532 aa7.59□□□□□ -1.2
CPNE3-203ENST00000517490 SLFN14P0C7P3 912 aa7.58□□□□□ -1.2
CPNE3-203ENST00000517490 GCKRQ14397 625 aa7.58□□□□□ -1.2
CPNE3-203ENST00000517490 IQCB1Q15051 598 aa7.58□□□□□ -1.2
CPNE3-203ENST00000517490 ZNF589Q86UQ0 364 aaPredicted RBP7.58□□□□□ -1.2
CPNE3-203ENST00000517490 IGSF22Q8N9C0 903 aa7.58□□□□□ -1.2
CPNE3-203ENST00000517490 RNF41Q9H4P4 317 aaPredicted RBP7.58□□□□□ -1.2
CPNE3-203ENST00000517490 RMND1Q9NWS8 449 aa7.58□□□□□ -1.2
CPNE3-203ENST00000517490 NFE2L3Q9Y4A8 694 aa7.58□□□□□ -1.2
CPNE3-203ENST00000517490 MROH2AA6NES4 1674 aa7.58□□□□□ -1.2
CPNE3-203ENST00000517490 PXDNLA1KZ92 1463 aa7.58□□□□□ -1.2
CPNE3-203ENST00000517490 CALRP27797 417 aaKnown RBP7.58□□□□□ -1.2
CPNE3-203ENST00000517490 PDIA3P30101 505 aaKnown RBP7.58□□□□□ -1.2
CPNE3-203ENST00000517490 PAFAH1B1P43034 410 aa7.58□□□□□ -1.2
CPNE3-203ENST00000517490 IFIT5Q13325 482 aaKnown RBP7.58□□□□□ -1.2
CPNE3-203ENST00000517490 AMOTL1Q8IY63 956 aa7.58□□□□□ -1.2
CPNE3-203ENST00000517490 EDC3Q96F86 508 aaKnown RBP7.58□□□□□ -1.2
CPNE3-203ENST00000517490 HAUS7Q99871 368 aa7.58□□□□□ -1.2
CPNE3-203ENST00000517490 METP08581 1390 aa7.58□□□□□ -1.2
CPNE3-203ENST00000517490 EBAG9O00559 213 aa7.58□□□□□ -1.2
CPNE3-203ENST00000517490 CYP21A2P08686 494 aa7.58□□□□□ -1.2
CPNE3-203ENST00000517490 TSGA10IPQ3SY00 556 aa7.58□□□□□ -1.2
CPNE3-203ENST00000517490 AFAP1L1Q8TED9 768 aa7.58□□□□□ -1.2
CPNE3-203ENST00000517490 MYO6Q9UM54 1294 aa7.58□□□□□ -1.2
CPNE3-203ENST00000517490 AP5Z1O43299 807 aa7.58□□□□□ -1.2
CPNE3-203ENST00000517490 OPA1O60313 960 aa7.58□□□□□ -1.2
CPNE3-203ENST00000517490 PHACTR2O75167 634 aa7.58□□□□□ -1.2
CPNE3-203ENST00000517490 SEC31AO94979 1220 aaKnown RBP7.58□□□□□ -1.2
CPNE3-203ENST00000517490 CYLC1P35663 651 aaPredicted RBP7.58□□□□□ -1.2
CPNE3-203ENST00000517490 KRT83P78385 493 aa7.58□□□□□ -1.2
CPNE3-203ENST00000517490 CCZ1BP86790 482 aa7.58□□□□□ -1.2
CPNE3-203ENST00000517490 CCZ1P86791 482 aaPredicted RBP7.58□□□□□ -1.2
CPNE3-203ENST00000517490 NYAP1Q6ZVC0 841 aa7.58□□□□□ -1.2
CPNE3-203ENST00000517490 LINC00301Q8NCQ3 95 aa7.58□□□□□ -1.2
CPNE3-203ENST00000517490 MAP3K12Q12852 859 aa7.57□□□□□ -1.2
CPNE3-203ENST00000517490 TRIM14Q14142 442 aa7.57□□□□□ -1.2
CPNE3-203ENST00000517490 RILPL1Q5EBL4 403 aa7.57□□□□□ -1.2
CPNE3-203ENST00000517490 FKBP15Q5T1M5 1219 aa7.57□□□□□ -1.2
CPNE3-203ENST00000517490 RBM43Q6ZSC3 357 aaKnown RBP7.57□□□□□ -1.2
CPNE3-203ENST00000517490 DHX40Q8IX18 779 aaKnown RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms