RNA–Protein interactions for RNA: ENST00000517488.1

PDGFRB-202, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 822 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-202ENST00000517488 SURF6O75683 361 aaKnown RBP17.43■□□□□ 0.38
PDGFRB-202ENST00000517488 MAP2K2P36507 400 aa17.43■□□□□ 0.38
PDGFRB-202ENST00000517488 ZNF157P51786 506 aaPredicted RBP17.43■□□□□ 0.38
PDGFRB-202ENST00000517488 FKBP1BP68106 108 aa17.43■□□□□ 0.38
PDGFRB-202ENST00000517488 HDLBPQ00341 1268 aaKnown RBP17.43■□□□□ 0.38
PDGFRB-202ENST00000517488 MAP2K1Q02750 393 aaPredicted RBP17.43■□□□□ 0.38
PDGFRB-202ENST00000517488 MVPQ14764 893 aaKnown RBP17.43■□□□□ 0.38
PDGFRB-202ENST00000517488 SPDYE2Q495Y8 402 aa17.43■□□□□ 0.38
PDGFRB-202ENST00000517488 CEP85Q6P2H3 762 aa17.43■□□□□ 0.38
PDGFRB-202ENST00000517488 NEUROD6Q96NK8 337 aa17.43■□□□□ 0.38
PDGFRB-202ENST00000517488 DENND2AQ9ULE3 1009 aa17.43■□□□□ 0.38
PDGFRB-202ENST00000517488 SEMA3EO15041 775 aa17.42■□□□□ 0.38
PDGFRB-202ENST00000517488 RASGRF1Q13972 1273 aa17.42■□□□□ 0.38
PDGFRB-202ENST00000517488 C20orf194Q5TEA3 1177 aa17.42■□□□□ 0.38
PDGFRB-202ENST00000517488 TEKT1Q969V4 418 aa17.42■□□□□ 0.38
PDGFRB-202ENST00000517488 MRIQ9BWK5 157 aa17.42■□□□□ 0.38
PDGFRB-202ENST00000517488 NOP58Q9Y2X3 529 aaKnown RBP17.42■□□□□ 0.38
PDGFRB-202ENST00000517488 ZBTB22O15209 634 aa17.41■□□□□ 0.38
PDGFRB-202ENST00000517488 PRDX5P30044 214 aa17.41■□□□□ 0.38
PDGFRB-202ENST00000517488 NF2P35240 595 aa17.41■□□□□ 0.38
PDGFRB-202ENST00000517488 NOGQ13253 232 aa17.41■□□□□ 0.38
PDGFRB-202ENST00000517488 OS9Q13438 667 aaPredicted RBP17.41■□□□□ 0.38
PDGFRB-202ENST00000517488 PRKG1Q13976 671 aa17.41■□□□□ 0.38
PDGFRB-202ENST00000517488 TTLL12Q14166 644 aaPredicted RBP17.41■□□□□ 0.38
PDGFRB-202ENST00000517488 RASA3Q14644 834 aa17.41■□□□□ 0.38
PDGFRB-202ENST00000517488 COL13A1Q5TAT6 717 aaPredicted RBP17.41■□□□□ 0.38
PDGFRB-202ENST00000517488 APOBEC3HQ6NTF7 200 aaKnown RBP17.41■□□□□ 0.38
PDGFRB-202ENST00000517488 AIDAQ96BJ3 306 aa17.41■□□□□ 0.38
PDGFRB-202ENST00000517488 ZDHHC15Q96MV8 337 aa17.41■□□□□ 0.38
PDGFRB-202ENST00000517488 FZD1Q9UP38 647 aa17.41■□□□□ 0.38
PDGFRB-202ENST00000517488 PPP2R3BQ9Y5P8 575 aa17.41■□□□□ 0.38
PDGFRB-202ENST00000517488 CCDC102AQ96A19 550 aa17.4■□□□□ 0.38
PDGFRB-202ENST00000517488 MAST3O60307 1309 aa17.4■□□□□ 0.38
PDGFRB-202ENST00000517488 SALL1Q9NSC2 1324 aa17.4■□□□□ 0.38
PDGFRB-202ENST00000517488 TCP10L2B9ZVM9 353 aa17.39■□□□□ 0.37
PDGFRB-202ENST00000517488 LDHBP07195 334 aaKnown RBP17.39■□□□□ 0.37
PDGFRB-202ENST00000517488 SLC10A3P09131 477 aa17.39■□□□□ 0.37
PDGFRB-202ENST00000517488 CACNB3P54284 484 aa17.39■□□□□ 0.37
PDGFRB-202ENST00000517488 DIXDC1Q155Q3 683 aa17.39■□□□□ 0.37
PDGFRB-202ENST00000517488 GORABQ5T7V8 394 aa17.39■□□□□ 0.37
PDGFRB-202ENST00000517488 NBPF12Q5TAG4 269 aaPredicted RBP17.39■□□□□ 0.37
PDGFRB-202ENST00000517488 HHIPL2Q6UWX4 724 aa17.39■□□□□ 0.37
PDGFRB-202ENST00000517488 CDAN1Q8IWY9 1227 aa17.39■□□□□ 0.37
PDGFRB-202ENST00000517488 ZBTB40Q9NUA8 1239 aa17.39■□□□□ 0.37
PDGFRB-202ENST00000517488 DDX19BQ9UMR2 479 aa17.39■□□□□ 0.37
PDGFRB-202ENST00000517488 CTCFP49711 727 aaPredicted RBP17.38■□□□□ 0.37
PDGFRB-202ENST00000517488 TNNI3KQ59H18 835 aa17.38■□□□□ 0.37
PDGFRB-202ENST00000517488 ARMC9Q7Z3E5 817 aa17.38■□□□□ 0.37
PDGFRB-202ENST00000517488 RASAL3Q86YV0 1011 aa17.38■□□□□ 0.37
PDGFRB-202ENST00000517488 YTHDC1Q96MU7 727 aaKnown RBP17.38■□□□□ 0.37
PDGFRB-202ENST00000517488 GPR108Q9NPR9 543 aa17.38■□□□□ 0.37
PDGFRB-202ENST00000517488 ANGEL1Q9UNK9 670 aaKnown RBP17.38■□□□□ 0.37
PDGFRB-202ENST00000517488 FPGT-TNNI3KV9GXZ4 949 aa17.38■□□□□ 0.37
PDGFRB-202ENST00000517488 PAPPA2Q9BXP8 1791 aa17.38■□□□□ 0.37
PDGFRB-202ENST00000517488 SSC5DA1L4H1 1573 aa17.37■□□□□ 0.37
PDGFRB-202ENST00000517488 KIF23Q02241 960 aaPredicted RBP17.37■□□□□ 0.37
PDGFRB-202ENST00000517488 TNFAIP1Q13829 316 aa17.37■□□□□ 0.37
PDGFRB-202ENST00000517488 PDE3AQ14432 1141 aa17.37■□□□□ 0.37
PDGFRB-202ENST00000517488 SUPT20HL1Q3ZLR7 823 aa17.37■□□□□ 0.37
PDGFRB-202ENST00000517488 LDLRAD1Q5T700 205 aa17.37■□□□□ 0.37
PDGFRB-202ENST00000517488 PI16Q6UXB8 463 aa17.37■□□□□ 0.37
PDGFRB-202ENST00000517488 DBNDD2Q9BQY9 259 aa17.37■□□□□ 0.37
PDGFRB-202ENST00000517488 TMEM39BQ9GZU3 492 aa17.37■□□□□ 0.37
PDGFRB-202ENST00000517488 HMG20BQ9P0W2 317 aa17.37■□□□□ 0.37
PDGFRB-202ENST00000517488 EXOC6BQ9Y2D4 811 aa17.37■□□□□ 0.37
PDGFRB-202ENST00000517488 DAGLAQ9Y4D2 1042 aa17.37■□□□□ 0.37
PDGFRB-202ENST00000517488 PDS5AQ29RF7 1337 aaKnown RBP17.37■□□□□ 0.37
PDGFRB-202ENST00000517488 THSD7BQ9C0I4 1608 aa17.36■□□□□ 0.37
PDGFRB-202ENST00000517488 HSPA8P11142 646 aaKnown RBP17.36■□□□□ 0.37
PDGFRB-202ENST00000517488 LBX1P52954 281 aa17.36■□□□□ 0.37
PDGFRB-202ENST00000517488 IFFO2Q5TF58 517 aa17.36■□□□□ 0.37
PDGFRB-202ENST00000517488 SIRT2Q8IXJ6 389 aa17.36■□□□□ 0.37
PDGFRB-202ENST00000517488 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.36■□□□□ 0.37
PDGFRB-202ENST00000517488 TEPSINQ96N21 525 aa17.36■□□□□ 0.37
PDGFRB-202ENST00000517488 BEGAINQ9BUH8 593 aa17.36■□□□□ 0.37
PDGFRB-202ENST00000517488 ABCF2Q9UG63 623 aa17.36■□□□□ 0.37
PDGFRB-202ENST00000517488 ARID4AP29374 1257 aaPredicted RBP17.35■□□□□ 0.37
PDGFRB-202ENST00000517488 MAP3K11Q16584 847 aa17.35■□□□□ 0.37
PDGFRB-202ENST00000517488 ZGPATQ8N5A5 531 aaKnown RBP17.35■□□□□ 0.37
PDGFRB-202ENST00000517488 SPATA5Q8NB90 893 aa17.35■□□□□ 0.37
PDGFRB-202ENST00000517488 TSKSQ9UJT2 592 aa17.35■□□□□ 0.37
PDGFRB-202ENST00000517488 ARAP2Q8WZ64 1704 aa17.35■□□□□ 0.37
PDGFRB-202ENST00000517488 PPP1R12BO60237 982 aaPredicted RBP17.34■□□□□ 0.37
PDGFRB-202ENST00000517488 USP2O75604 605 aaPredicted RBP17.34■□□□□ 0.37
PDGFRB-202ENST00000517488 MCAMP43121 646 aa17.34■□□□□ 0.37
PDGFRB-202ENST00000517488 TNNI2P48788 182 aa17.34■□□□□ 0.37
PDGFRB-202ENST00000517488 CDC42EP5Q6NZY7 148 aa17.34■□□□□ 0.37
PDGFRB-202ENST00000517488 TBC1D9Q6ZT07 1266 aa17.34■□□□□ 0.37
PDGFRB-202ENST00000517488 RPAP2Q8IXW5 612 aaPredicted RBP17.34■□□□□ 0.37
PDGFRB-202ENST00000517488 EAF2Q96CJ1 260 aaPredicted RBP17.34■□□□□ 0.37
PDGFRB-202ENST00000517488 CSRNP1Q96S65 589 aa17.34■□□□□ 0.37
PDGFRB-202ENST00000517488 PRDM10Q9NQV6 1147 aa17.34■□□□□ 0.37
PDGFRB-202ENST00000517488 TLR7Q9NYK1 1049 aaKnown RBP17.34■□□□□ 0.37
PDGFRB-202ENST00000517488 TMOD2Q9NZR1 351 aa17.34■□□□□ 0.37
PDGFRB-202ENST00000517488 UQCRFS1P1P0C7P4 283 aa17.33■□□□□ 0.36
PDGFRB-202ENST00000517488 MKRN3Q13064 507 aaKnown RBP17.33■□□□□ 0.36
PDGFRB-202ENST00000517488 FKBP1CQ5VVH2 108 aa17.33■□□□□ 0.36
PDGFRB-202ENST00000517488 DZIP1Q86YF9 867 aaKnown RBP17.33■□□□□ 0.36
PDGFRB-202ENST00000517488 CLMNQ96JQ2 1002 aa17.33■□□□□ 0.36
PDGFRB-202ENST00000517488 CCDC8Q9H0W5 538 aaPredicted RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms