RNA–Protein interactions for RNA: ENST00000517323.2

TRPS1-206, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 5

Gene TRPS1, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-206ENST00000517323 ERICH6Q7L0X2 663 aa18.65■□□□□ 0.58
TRPS1-206ENST00000517323 RTKN2Q8IZC4 609 aa18.65■□□□□ 0.58
TRPS1-206ENST00000517323 LCORLQ8N3X6 602 aa18.65■□□□□ 0.58
TRPS1-206ENST00000517323 RFX7Q2KHR2 1363 aa18.65■□□□□ 0.58
TRPS1-206ENST00000517323 KIAA1211Q6ZU35 1233 aa18.65■□□□□ 0.58
TRPS1-206ENST00000517323 RASEFQ8IZ41 740 aa18.65■□□□□ 0.58
TRPS1-206ENST00000517323 LARGE2Q8N3Y3 721 aa18.65■□□□□ 0.58
TRPS1-206ENST00000517323 RAD50Q92878 1312 aa18.64■□□□□ 0.57
TRPS1-206ENST00000517323 RAD17O75943 681 aa18.64■□□□□ 0.57
TRPS1-206ENST00000517323 HELLSQ9NRZ9 838 aa18.64■□□□□ 0.57
TRPS1-206ENST00000517323 PCDHAC2Q9Y5I4 1007 aa18.64■□□□□ 0.57
TRPS1-206ENST00000517323 ARFGEF1Q9Y6D6 1849 aa18.64■□□□□ 0.57
TRPS1-206ENST00000517323 LDHBP07195 334 aaKnown RBP18.64■□□□□ 0.57
TRPS1-206ENST00000517323 SCNN1DP51172 638 aa18.64■□□□□ 0.57
TRPS1-206ENST00000517323 CC2D2BQ6DHV5 1058 aa18.64■□□□□ 0.57
TRPS1-206ENST00000517323 NAA16Q6N069 864 aaPredicted RBP18.64■□□□□ 0.57
TRPS1-206ENST00000517323 RBM8AQ9Y5S9 174 aaKnown RBP18.64■□□□□ 0.57
TRPS1-206ENST00000517323 ZFYP08048 801 aaPredicted RBP18.63■□□□□ 0.57
TRPS1-206ENST00000517323 HSPD1P10809 573 aaKnown RBP18.63■□□□□ 0.57
TRPS1-206ENST00000517323 UBE3CQ15386 1083 aa18.63■□□□□ 0.57
TRPS1-206ENST00000517323 DZIP1Q86YF9 867 aaKnown RBP18.63■□□□□ 0.57
TRPS1-206ENST00000517323 WDR66Q8TBY9 1149 aa18.63■□□□□ 0.57
TRPS1-206ENST00000517323 PSMD1Q99460 953 aa18.63■□□□□ 0.57
TRPS1-206ENST00000517323 TAOK3Q9H2K8 898 aa18.63■□□□□ 0.57
TRPS1-206ENST00000517323 AATFQ9NY61 560 aaKnown RBP eCLIP18.63■□□□□ 0.57
TRPS1-206ENST00000517323 SMIM22K7EJ46 135 aa18.62■□□□□ 0.57
TRPS1-206ENST00000517323 YBX3P16989 372 aaKnown RBP eCLIP18.62■□□□□ 0.57
TRPS1-206ENST00000517323 RBM25P49756 843 aaKnown RBP18.62■□□□□ 0.57
TRPS1-206ENST00000517323 AIDAQ96BJ3 306 aa18.62■□□□□ 0.57
TRPS1-206ENST00000517323 PDS5AQ29RF7 1337 aaKnown RBP18.61■□□□□ 0.57
TRPS1-206ENST00000517323 BAZ2AQ9UIF9 1905 aaKnown RBP18.61■□□□□ 0.57
TRPS1-206ENST00000517323 SOCS7O14512 581 aa18.61■□□□□ 0.57
TRPS1-206ENST00000517323 CPA1P15085 419 aa18.61■□□□□ 0.57
TRPS1-206ENST00000517323 SLC4A8Q2Y0W8 1093 aa18.61■□□□□ 0.57
TRPS1-206ENST00000517323 ZSCAN25Q6NSZ9 544 aa18.61■□□□□ 0.57
TRPS1-206ENST00000517323 KIAA0825Q8IV33 1275 aa18.61■□□□□ 0.57
TRPS1-206ENST00000517323 SDR42E1Q8WUS8 393 aa18.61■□□□□ 0.57
TRPS1-206ENST00000517323 MAP4K1Q92918 833 aa18.61■□□□□ 0.57
TRPS1-206ENST00000517323 MAST2Q6P0Q8 1798 aa18.61■□□□□ 0.57
TRPS1-206ENST00000517323 IARSP41252 1262 aaKnown RBP18.61■□□□□ 0.57
TRPS1-206ENST00000517323 SLC4A3P48751 1232 aa18.61■□□□□ 0.57
TRPS1-206ENST00000517323 EVX2Q03828 476 aa18.61■□□□□ 0.57
TRPS1-206ENST00000517323 STRBPQ96SI9 672 aaKnown RBP18.61■□□□□ 0.57
TRPS1-206ENST00000517323 ZBTB12Q9Y330 459 aaPredicted RBP18.61■□□□□ 0.57
TRPS1-206ENST00000517323 FAM205AQ6ZU69 1335 aa18.6■□□□□ 0.57
TRPS1-206ENST00000517323 HAND2P61296 217 aa18.6■□□□□ 0.57
TRPS1-206ENST00000517323 ARHGAP27Q6ZUM4 889 aa18.6■□□□□ 0.57
TRPS1-206ENST00000517323 PODNQ7Z5L7 613 aa18.6■□□□□ 0.57
TRPS1-206ENST00000517323 SUPT20HQ8NEM7 779 aa18.6■□□□□ 0.57
TRPS1-206ENST00000517323 SALL1Q9NSC2 1324 aa18.6■□□□□ 0.57
TRPS1-206ENST00000517323 CD2BP2O95400 341 aaKnown RBP18.59■□□□□ 0.57
TRPS1-206ENST00000517323 APPP05067 770 aa18.59■□□□□ 0.57
TRPS1-206ENST00000517323 ADCK5Q3MIX3 580 aa18.59■□□□□ 0.57
TRPS1-206ENST00000517323 DACT2Q5SW24 774 aa18.59■□□□□ 0.57
TRPS1-206ENST00000517323 STK11IPQ8N1F8 1099 aa18.59■□□□□ 0.57
TRPS1-206ENST00000517323 HSPA4P34932 840 aa18.59■□□□□ 0.57
TRPS1-206ENST00000517323 RIOK1Q9BRS2 568 aaKnown RBP18.59■□□□□ 0.57
TRPS1-206ENST00000517323 EPB41L4AQ9HCS5 686 aaPredicted RBP18.59■□□□□ 0.57
TRPS1-206ENST00000517323 TTF2Q9UNY4 1162 aaKnown RBP18.59■□□□□ 0.57
TRPS1-206ENST00000517323 MAGEB6P1A0A0J9YX57 407 aa18.58■□□□□ 0.57
TRPS1-206ENST00000517323 NECTIN1Q15223 517 aa18.58■□□□□ 0.57
TRPS1-206ENST00000517323 LRRFIP1Q32MZ4 808 aaKnown RBP18.58■□□□□ 0.57
TRPS1-206ENST00000517323 UPF3BQ9BZI7 483 aaKnown RBP18.58■□□□□ 0.57
TRPS1-206ENST00000517323 SNX14Q9Y5W7 946 aa18.58■□□□□ 0.57
TRPS1-206ENST00000517323 PSMD14O00487 310 aa18.58■□□□□ 0.56
TRPS1-206ENST00000517323 CREB3L3Q68CJ9 461 aa18.58■□□□□ 0.56
TRPS1-206ENST00000517323 SHTN1A0MZ66 631 aa18.57■□□□□ 0.56
TRPS1-206ENST00000517323 USP17L3A6NCW0 530 aa18.57■□□□□ 0.56
TRPS1-206ENST00000517323 USP17L4A6NCW7 530 aa18.57■□□□□ 0.56
TRPS1-206ENST00000517323 SLC27A2O14975 620 aa18.57■□□□□ 0.56
TRPS1-206ENST00000517323 FGAP02671 866 aa18.57■□□□□ 0.56
TRPS1-206ENST00000517323 SOGA3Q5TF21 947 aa18.57■□□□□ 0.56
TRPS1-206ENST00000517323 USP17L1Q7RTZ2 530 aa18.57■□□□□ 0.56
TRPS1-206ENST00000517323 SLC4A4Q9Y6R1 1079 aa18.57■□□□□ 0.56
TRPS1-206ENST00000517323 CYP21A2P08686 494 aa18.57■□□□□ 0.56
TRPS1-206ENST00000517323 SPTY2D1Q68D10 685 aaPredicted RBP18.57■□□□□ 0.56
TRPS1-206ENST00000517323 SH3RF3Q8TEJ3 882 aaPredicted RBP18.57■□□□□ 0.56
TRPS1-206ENST00000517323 INCENPQ9NQS7 918 aa18.57■□□□□ 0.56
TRPS1-206ENST00000517323 PSME4Q14997 1843 aa18.56■□□□□ 0.56
TRPS1-206ENST00000517323 CDK5RAP2Q96SN8 1893 aa18.56■□□□□ 0.56
TRPS1-206ENST00000517323 CYP2D7A0A087X1C5 515 aa18.56■□□□□ 0.56
TRPS1-206ENST00000517323 GSG1L2A8MUP6 293 aa18.56■□□□□ 0.56
TRPS1-206ENST00000517323 NIM1KQ8IY84 436 aa18.56■□□□□ 0.56
TRPS1-206ENST00000517323 ZGPATQ8N5A5 531 aaKnown RBP18.56■□□□□ 0.56
TRPS1-206ENST00000517323 NKX2-3Q8TAU0 364 aa18.56■□□□□ 0.56
TRPS1-206ENST00000517323 STRIP1Q5VSL9 837 aa18.55■□□□□ 0.56
TRPS1-206ENST00000517323 TBC1D22AQ8WUA7 517 aa18.55■□□□□ 0.56
TRPS1-206ENST00000517323 TCEANC2Q96MN5 208 aa18.55■□□□□ 0.56
TRPS1-206ENST00000517323 SBF1O95248 1867 aa18.55■□□□□ 0.56
TRPS1-206ENST00000517323 ANP32AP39687 249 aaKnown RBP18.55■□□□□ 0.56
TRPS1-206ENST00000517323 BTDP43251 543 aa18.55■□□□□ 0.56
TRPS1-206ENST00000517323 CXCL9Q07325 125 aa18.55■□□□□ 0.56
TRPS1-206ENST00000517323 LARP6Q9BRS8 491 aaKnown RBP18.55■□□□□ 0.56
TRPS1-206ENST00000517323 DAGLAQ9Y4D2 1042 aa18.55■□□□□ 0.56
TRPS1-206ENST00000517323 STOX1Q6ZVD7 989 aa18.54■□□□□ 0.56
TRPS1-206ENST00000517323 NOL8Q76FK4 1167 aaKnown RBP18.54■□□□□ 0.56
TRPS1-206ENST00000517323 ZNRF3Q9ULT6 936 aa18.54■□□□□ 0.56
TRPS1-206ENST00000517323 MROH7-TTC4A0A0A0MT08 1334 aa18.54■□□□□ 0.56
TRPS1-206ENST00000517323 LAMA4Q16363 1823 aa18.54■□□□□ 0.56
TRPS1-206ENST00000517323 DSCC1Q9BVC3 393 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms