RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 NF2P35240 595 aa4.85□□□□□ -1.63
SCARNA13-201ENST00000516672 EPHB4P54760 987 aa4.85□□□□□ -1.63
SCARNA13-201ENST00000516672 RGL3Q3MIN7 710 aa4.85□□□□□ -1.63
SCARNA13-201ENST00000516672 CFAP70Q5T0N1 1121 aa4.85□□□□□ -1.63
SCARNA13-201ENST00000516672 TBC1D9BQ66K14 1250 aa4.85□□□□□ -1.63
SCARNA13-201ENST00000516672 KRT40Q6A162 431 aa4.85□□□□□ -1.63
SCARNA13-201ENST00000516672 INTS5Q6P9B9 1019 aaKnown RBP4.85□□□□□ -1.63
SCARNA13-201ENST00000516672 UNQ6494/PRO21346Q6UXR6 183 aa4.85□□□□□ -1.63
SCARNA13-201ENST00000516672 CNBD1Q8NA66 436 aa4.85□□□□□ -1.63
SCARNA13-201ENST00000516672 GLIS3Q8NEA6 775 aa4.85□□□□□ -1.63
SCARNA13-201ENST00000516672 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.85□□□□□ -1.63
SCARNA13-201ENST00000516672 UPF3BQ9BZI7 483 aaKnown RBP4.85□□□□□ -1.63
SCARNA13-201ENST00000516672 C14orf93Q9H972 538 aaKnown RBP4.85□□□□□ -1.63
SCARNA13-201ENST00000516672 GABRQQ9UN88 632 aa4.85□□□□□ -1.63
SCARNA13-201ENST00000516672 RAI2Q9Y5P3 530 aa4.85□□□□□ -1.63
SCARNA13-201ENST00000516672 TONSLQ96HA7 1378 aa4.85□□□□□ -1.63
SCARNA13-201ENST00000516672 CEP250Q9BV73 2442 aa4.84□□□□□ -1.63
SCARNA13-201ENST00000516672 GJA5P36382 358 aa4.84□□□□□ -1.63
SCARNA13-201ENST00000516672 SCARF1Q14162 830 aa4.84□□□□□ -1.63
SCARNA13-201ENST00000516672 PTCRAQ6ISU1 281 aaPredicted RBP4.84□□□□□ -1.63
SCARNA13-201ENST00000516672 RIC3Q7Z5B4 369 aa4.84□□□□□ -1.63
SCARNA13-201ENST00000516672 CLMNQ96JQ2 1002 aa4.84□□□□□ -1.63
SCARNA13-201ENST00000516672 NKX2-4Q9H2Z4 354 aa4.84□□□□□ -1.63
SCARNA13-201ENST00000516672 PRDM5Q9NQX1 630 aaPredicted RBP4.84□□□□□ -1.63
SCARNA13-201ENST00000516672 OGDHLQ9ULD0 1010 aa4.84□□□□□ -1.63
SCARNA13-201ENST00000516672 ANGEL1Q9UNK9 670 aaKnown RBP4.84□□□□□ -1.63
SCARNA13-201ENST00000516672 FZD1Q9UP38 647 aa4.84□□□□□ -1.63
SCARNA13-201ENST00000516672 UBR5O95071 2799 aaPredicted RBP4.83□□□□□ -1.64
SCARNA13-201ENST00000516672 SOS1Q07889 1333 aaPredicted RBP4.83□□□□□ -1.64
SCARNA13-201ENST00000516672 C19orf67A6NJJ6 358 aa4.83□□□□□ -1.64
SCARNA13-201ENST00000516672 RFXAPO00287 272 aa4.83□□□□□ -1.64
SCARNA13-201ENST00000516672 LMNAP02545 664 aaKnown RBP4.83□□□□□ -1.64
SCARNA13-201ENST00000516672 TATP17735 454 aaPredicted RBP4.83□□□□□ -1.64
SCARNA13-201ENST00000516672 POU3F3P20264 500 aaPredicted RBP4.83□□□□□ -1.64
SCARNA13-201ENST00000516672 ALDH1B1P30837 517 aa4.83□□□□□ -1.64
SCARNA13-201ENST00000516672 ZP2Q05996 745 aa4.83□□□□□ -1.64
SCARNA13-201ENST00000516672 RRS1Q15050 365 aaKnown RBP4.83□□□□□ -1.64
SCARNA13-201ENST00000516672 LEXMQ3ZCV2 418 aa4.83□□□□□ -1.64
SCARNA13-201ENST00000516672 CC2D2BQ6DHV5 1058 aa4.83□□□□□ -1.64
SCARNA13-201ENST00000516672 PDZD3Q86UT5 571 aa4.83□□□□□ -1.64
SCARNA13-201ENST00000516672 FAM43AQ8N2R8 423 aa4.83□□□□□ -1.64
SCARNA13-201ENST00000516672 DCLK2Q8N568 766 aa4.83□□□□□ -1.64
SCARNA13-201ENST00000516672 HELBQ8NG08 1087 aaPredicted RBP4.83□□□□□ -1.64
SCARNA13-201ENST00000516672 RAPGEF4Q8WZA2 1011 aa4.83□□□□□ -1.64
SCARNA13-201ENST00000516672 RTKNQ9BST9 563 aa4.83□□□□□ -1.64
SCARNA13-201ENST00000516672 SLC28A3Q9HAS3 691 aa4.83□□□□□ -1.64
SCARNA13-201ENST00000516672 CHD7Q9P2D1 2997 aa4.83□□□□□ -1.64
SCARNA13-201ENST00000516672 GRXCR2A6NFK2 248 aa4.82□□□□□ -1.64
SCARNA13-201ENST00000516672 PMLP29590 882 aa4.82□□□□□ -1.64
SCARNA13-201ENST00000516672 SHC2P98077 582 aa4.82□□□□□ -1.64
SCARNA13-201ENST00000516672 USHBP1Q8N6Y0 703 aa4.82□□□□□ -1.64
SCARNA13-201ENST00000516672 PXYLP1Q8TE99 480 aa4.82□□□□□ -1.64
SCARNA13-201ENST00000516672 BRI3BPQ8WY22 251 aa4.82□□□□□ -1.64
SCARNA13-201ENST00000516672 UBE2ZQ9H832 354 aaPredicted RBP4.82□□□□□ -1.64
SCARNA13-201ENST00000516672 MSRAQ9UJ68 235 aa4.82□□□□□ -1.64
SCARNA13-201ENST00000516672 CDV3Q9UKY7 258 aaKnown RBP4.82□□□□□ -1.64
SCARNA13-201ENST00000516672 RGPD2P0DJD1 1756 aa4.82□□□□□ -1.64
SCARNA13-201ENST00000516672 WDFY3Q8IZQ1 3526 aa4.82□□□□□ -1.64
SCARNA13-201ENST00000516672 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.81□□□□□ -1.64
SCARNA13-201ENST00000516672 YDJCA8MPS7 323 aa4.81□□□□□ -1.64
SCARNA13-201ENST00000516672 PSMD14O00487 310 aa4.81□□□□□ -1.64
SCARNA13-201ENST00000516672 WDHD1O75717 1129 aaPredicted RBP4.81□□□□□ -1.64
SCARNA13-201ENST00000516672 PRB1P04280 392 aa4.81□□□□□ -1.64
SCARNA13-201ENST00000516672 POU3F2P20265 443 aaPredicted RBP4.81□□□□□ -1.64
SCARNA13-201ENST00000516672 ATN1P54259 1190 aaPredicted RBP4.81□□□□□ -1.64
SCARNA13-201ENST00000516672 NKX1-1Q15270 411 aaPredicted RBP4.81□□□□□ -1.64
SCARNA13-201ENST00000516672 RAB30Q15771 203 aa4.81□□□□□ -1.64
SCARNA13-201ENST00000516672 ZFP91Q96JP5 570 aaPredicted RBP4.81□□□□□ -1.64
SCARNA13-201ENST00000516672 VPS33BQ9H267 617 aa4.81□□□□□ -1.64
SCARNA13-201ENST00000516672 CLMPQ9H6B4 373 aa4.81□□□□□ -1.64
SCARNA13-201ENST00000516672 PRRC2BQ5JSZ5 2229 aaKnown RBP4.8□□□□□ -1.64
SCARNA13-201ENST00000516672 TTC21BQ7Z4L5 1316 aa4.8□□□□□ -1.64
SCARNA13-201ENST00000516672 ITPR1Q14643 2758 aa4.8□□□□□ -1.64
SCARNA13-201ENST00000516672 EP300Q09472 2414 aaPredicted RBP4.8□□□□□ -1.64
SCARNA13-201ENST00000516672 J3QKU1 62 aa4.8□□□□□ -1.64
SCARNA13-201ENST00000516672 KCNA5P22460 613 aa4.8□□□□□ -1.64
SCARNA13-201ENST00000516672 FLT3LGP49771 235 aa4.8□□□□□ -1.64
SCARNA13-201ENST00000516672 RTP1P59025 263 aa4.8□□□□□ -1.64
SCARNA13-201ENST00000516672 GRIPAP1Q4V328 841 aa4.8□□□□□ -1.64
SCARNA13-201ENST00000516672 EPHA10Q5JZY3 1008 aa4.8□□□□□ -1.64
SCARNA13-201ENST00000516672 ZNF605Q86T29 641 aa4.8□□□□□ -1.64
SCARNA13-201ENST00000516672 RNF135Q8IUD6 432 aa4.8□□□□□ -1.64
SCARNA13-201ENST00000516672 ZGPATQ8N5A5 531 aaKnown RBP4.8□□□□□ -1.64
SCARNA13-201ENST00000516672 RUBCNQ92622 972 aa4.8□□□□□ -1.64
SCARNA13-201ENST00000516672 MS4A4AQ96JQ5 239 aa4.8□□□□□ -1.64
SCARNA13-201ENST00000516672 SENP6Q9GZR1 1112 aaPredicted RBP4.8□□□□□ -1.64
SCARNA13-201ENST00000516672 CPA4Q9UI42 421 aa4.8□□□□□ -1.64
SCARNA13-201ENST00000516672 YBX2Q9Y2T7 364 aaKnown RBP4.8□□□□□ -1.64
SCARNA13-201ENST00000516672 MYO9BQ13459 2157 aa4.8□□□□□ -1.64
SCARNA13-201ENST00000516672 IGSF10Q6WRI0 2623 aa4.79□□□□□ -1.64
SCARNA13-201ENST00000516672 FRYLO94915 3013 aa4.79□□□□□ -1.64
SCARNA13-201ENST00000516672 ZNF536O15090 1300 aa4.79□□□□□ -1.64
SCARNA13-201ENST00000516672 WASHC2AQ641Q2 1341 aa4.79□□□□□ -1.64
SCARNA13-201ENST00000516672 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.79□□□□□ -1.64
SCARNA13-201ENST00000516672 CCL15-CCL14A0A0B4J2E2 113 aa4.79□□□□□ -1.64
SCARNA13-201ENST00000516672 KLRG2A4D1S0 409 aaPredicted RBP4.79□□□□□ -1.64
SCARNA13-201ENST00000516672 PTCD1O75127 700 aaKnown RBP4.79□□□□□ -1.64
SCARNA13-201ENST00000516672 CCL15Q16663 113 aa4.79□□□□□ -1.64
SCARNA13-201ENST00000516672 C17orf99Q6UX52 265 aa4.79□□□□□ -1.64
SCARNA13-201ENST00000516672 ADHFE1Q8IWW8 467 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms