RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 SEC31BQ9NQW1 1179 aa1.14□□□□□ -2.23
RNU6-542P-201ENST00000516405 LOC100289279A0A1B0GTE1 492 aa1.13□□□□□ -2.23
RNU6-542P-201ENST00000516405 SEMA7AO75326 666 aa1.13□□□□□ -2.23
RNU6-542P-201ENST00000516405 GHRHP01286 108 aa1.13□□□□□ -2.23
RNU6-542P-201ENST00000516405 RARAP10276 462 aa1.13□□□□□ -2.23
RNU6-542P-201ENST00000516405 EPHA1P21709 976 aa1.13□□□□□ -2.23
RNU6-542P-201ENST00000516405 OXCT1P55809 520 aa1.13□□□□□ -2.23
RNU6-542P-201ENST00000516405 USP4Q13107 963 aa1.13□□□□□ -2.23
RNU6-542P-201ENST00000516405 IKZF1Q13422 519 aa1.13□□□□□ -2.23
RNU6-542P-201ENST00000516405 TBCELQ5QJ74 424 aa1.13□□□□□ -2.23
RNU6-542P-201ENST00000516405 UBXN11Q5T124 520 aa1.13□□□□□ -2.23
RNU6-542P-201ENST00000516405 ATG9BQ674R7 924 aa1.13□□□□□ -2.23
RNU6-542P-201ENST00000516405 TP53I13Q8NBR0 393 aaPredicted RBP1.13□□□□□ -2.23
RNU6-542P-201ENST00000516405 ZMYND15Q9H091 742 aa1.13□□□□□ -2.23
RNU6-542P-201ENST00000516405 VPS11Q9H270 941 aa1.13□□□□□ -2.23
RNU6-542P-201ENST00000516405 SCHIP1Q9P0W5 487 aaPredicted RBP1.13□□□□□ -2.23
RNU6-542P-201ENST00000516405 ZNF232Q9UNY5 417 aa1.13□□□□□ -2.23
RNU6-542P-201ENST00000516405 TMEM265A0A087WTH1 108 aa1.12□□□□□ -2.23
RNU6-542P-201ENST00000516405 ITGB3P05106 788 aa1.12□□□□□ -2.23
RNU6-542P-201ENST00000516405 CEACAM5P06731 702 aa1.12□□□□□ -2.23
RNU6-542P-201ENST00000516405 CDC27P30260 824 aa1.12□□□□□ -2.23
RNU6-542P-201ENST00000516405 CDSNQ15517 529 aa1.12□□□□□ -2.23
RNU6-542P-201ENST00000516405 C1orf53Q5VUE5 145 aa1.12□□□□□ -2.23
RNU6-542P-201ENST00000516405 PAPD7Q5XG87 772 aaKnown RBP1.12□□□□□ -2.23
RNU6-542P-201ENST00000516405 PNMA1Q8ND90 353 aa1.12□□□□□ -2.23
RNU6-542P-201ENST00000516405 NSUN5Q96P11 429 aaKnown RBP1.12□□□□□ -2.23
RNU6-542P-201ENST00000516405 CEP89Q96ST8 783 aa1.12□□□□□ -2.23
RNU6-542P-201ENST00000516405 TNKS2Q9H2K2 1166 aa1.12□□□□□ -2.23
RNU6-542P-201ENST00000516405 SH2B1Q9NRF2 756 aaPredicted RBP1.12□□□□□ -2.23
RNU6-542P-201ENST00000516405 TLR7Q9NYK1 1049 aaKnown RBP1.12□□□□□ -2.23
RNU6-542P-201ENST00000516405 HCN4Q9Y3Q4 1203 aa1.12□□□□□ -2.23
RNU6-542P-201ENST00000516405 SALL3Q9BXA9 1300 aa1.12□□□□□ -2.23
RNU6-542P-201ENST00000516405 WDR33Q9C0J8 1336 aaKnown RBP1.12□□□□□ -2.23
RNU6-542P-201ENST00000516405 TEX51A0A1B0GUA7 166 aa1.11□□□□□ -2.23
RNU6-542P-201ENST00000516405 PEX10O60683 326 aa1.11□□□□□ -2.23
RNU6-542P-201ENST00000516405 MCCD1P59942 119 aaPredicted RBP1.11□□□□□ -2.23
RNU6-542P-201ENST00000516405 SOX4Q06945 474 aaPredicted RBP1.11□□□□□ -2.23
RNU6-542P-201ENST00000516405 MAP7Q14244 749 aa1.11□□□□□ -2.23
RNU6-542P-201ENST00000516405 CYP27C1Q4G0S4 372 aa1.11□□□□□ -2.23
RNU6-542P-201ENST00000516405 HGSNATQ68CP4 663 aa1.11□□□□□ -2.23
RNU6-542P-201ENST00000516405 GRASPQ7Z6J2 395 aaPredicted RBP1.11□□□□□ -2.23
RNU6-542P-201ENST00000516405 ABHD4Q8TB40 342 aa1.11□□□□□ -2.23
RNU6-542P-201ENST00000516405 CRAMP1Q96RY5 1269 aa1.11□□□□□ -2.23
RNU6-542P-201ENST00000516405 YIPF2Q9BWQ6 316 aa1.11□□□□□ -2.23
RNU6-542P-201ENST00000516405 PHACTR1Q9C0D0 580 aa1.11□□□□□ -2.23
RNU6-542P-201ENST00000516405 LGR6Q9HBX8 967 aa1.11□□□□□ -2.23
RNU6-542P-201ENST00000516405 CYP4F12Q9HCS2 524 aa1.11□□□□□ -2.23
RNU6-542P-201ENST00000516405 DMGDHQ9UI17 866 aaKnown RBP1.11□□□□□ -2.23
RNU6-542P-201ENST00000516405 ACTL7BQ9Y614 415 aa1.11□□□□□ -2.23
RNU6-542P-201ENST00000516405 SERTM1A2A2V5 107 aa1.1□□□□□ -2.23
RNU6-542P-201ENST00000516405 FAM87AP0C7U9 286 aa1.1□□□□□ -2.23
RNU6-542P-201ENST00000516405 RAB6AP20340 208 aa1.1□□□□□ -2.23
RNU6-542P-201ENST00000516405 FBLN1P23142 703 aa1.1□□□□□ -2.23
RNU6-542P-201ENST00000516405 ERVFC1P60507 584 aa1.1□□□□□ -2.23
RNU6-542P-201ENST00000516405 ATP11AP98196 1134 aa1.1□□□□□ -2.23
RNU6-542P-201ENST00000516405 TTLL12Q14166 644 aaPredicted RBP1.1□□□□□ -2.23
RNU6-542P-201ENST00000516405 ZNF605Q86T29 641 aa1.1□□□□□ -2.23
RNU6-542P-201ENST00000516405 LINC01356Q8N9X3 169 aa1.1□□□□□ -2.23
RNU6-542P-201ENST00000516405 ASB11Q8WXH4 323 aa1.1□□□□□ -2.23
RNU6-542P-201ENST00000516405 WASF1Q92558 559 aa1.1□□□□□ -2.23
RNU6-542P-201ENST00000516405 MKNK2Q9HBH9 465 aa1.1□□□□□ -2.23
RNU6-542P-201ENST00000516405 DUSP10Q9Y6W6 482 aa1.1□□□□□ -2.23
RNU6-542P-201ENST00000516405 PPFIA2O75334 1257 aa1.09□□□□□ -2.23
RNU6-542P-201ENST00000516405 EPHA4P54764 986 aa1.09□□□□□ -2.23
RNU6-542P-201ENST00000516405 CCDC142Q17RM4 750 aa1.09□□□□□ -2.23
RNU6-542P-201ENST00000516405 ZNF362Q5T0B9 420 aaPredicted RBP1.09□□□□□ -2.23
RNU6-542P-201ENST00000516405 CEP135Q66GS9 1140 aa1.09□□□□□ -2.23
RNU6-542P-201ENST00000516405 TMEM132EQ6IEE7 984 aa1.09□□□□□ -2.23
RNU6-542P-201ENST00000516405 POTEAQ6S8J7 498 aa1.09□□□□□ -2.23
RNU6-542P-201ENST00000516405 DVL3Q92997 716 aaPredicted RBP1.09□□□□□ -2.23
RNU6-542P-201ENST00000516405 SIGLEC10Q96LC7 697 aa1.09□□□□□ -2.23
RNU6-542P-201ENST00000516405 TRIM34Q9BYJ4 488 aa1.09□□□□□ -2.23
RNU6-542P-201ENST00000516405 RBSNQ9H1K0 784 aa1.09□□□□□ -2.23
RNU6-542P-201ENST00000516405 FAM105AQ9NUU6 356 aa1.09□□□□□ -2.23
RNU6-542P-201ENST00000516405 CEP126Q9P2H0 1117 aa1.09□□□□□ -2.23
RNU6-542P-201ENST00000516405 BCS1LQ9Y276 419 aa1.09□□□□□ -2.23
RNU6-542P-201ENST00000516405 SNX11Q9Y5W9 270 aa1.09□□□□□ -2.23
RNU6-542P-201ENST00000516405 ITIH2P19823 946 aa1.08□□□□□ -2.24
RNU6-542P-201ENST00000516405 KRTAP10-5P60370 271 aa1.08□□□□□ -2.24
RNU6-542P-201ENST00000516405 PIP4K2BP78356 416 aa1.08□□□□□ -2.24
RNU6-542P-201ENST00000516405 CDK5R2Q13319 367 aa1.08□□□□□ -2.24
RNU6-542P-201ENST00000516405 EPHA10Q5JZY3 1008 aa1.08□□□□□ -2.24
RNU6-542P-201ENST00000516405 IRF2BP1Q8IU81 584 aa1.08□□□□□ -2.24
RNU6-542P-201ENST00000516405 SLC9A9Q8IVB4 645 aa1.08□□□□□ -2.24
RNU6-542P-201ENST00000516405 TMEFF1Q8IYR6 380 aa1.08□□□□□ -2.24
RNU6-542P-201ENST00000516405 PHTF2Q8N3S3 785 aa1.08□□□□□ -2.24
RNU6-542P-201ENST00000516405 TTC9BQ8N6N2 239 aa1.08□□□□□ -2.24
RNU6-542P-201ENST00000516405 SAMD11Q96NU1 681 aa1.08□□□□□ -2.24
RNU6-542P-201ENST00000516405 ZNF552Q9H707 407 aaPredicted RBP1.08□□□□□ -2.24
RNU6-542P-201ENST00000516405 CARS2Q9HA77 564 aaKnown RBP1.08□□□□□ -2.24
RNU6-542P-201ENST00000516405 OSGEPQ9NPF4 335 aa1.08□□□□□ -2.24
RNU6-542P-201ENST00000516405 IRAK3Q9Y616 596 aa1.08□□□□□ -2.24
RNU6-542P-201ENST00000516405 MMP20O60882 483 aa1.07□□□□□ -2.24
RNU6-542P-201ENST00000516405 LEFTY1O75610 366 aa1.07□□□□□ -2.24
RNU6-542P-201ENST00000516405 ADH5P11766 374 aa1.07□□□□□ -2.24
RNU6-542P-201ENST00000516405 CTGFP29279 349 aa1.07□□□□□ -2.24
RNU6-542P-201ENST00000516405 ARID4AP29374 1257 aaPredicted RBP1.07□□□□□ -2.24
RNU6-542P-201ENST00000516405 INPP5BP32019 993 aa1.07□□□□□ -2.24
RNU6-542P-201ENST00000516405 CLK2P49760 499 aaKnown RBP1.07□□□□□ -2.24
RNU6-542P-201ENST00000516405 HIRAP54198 1017 aaPredicted RBP1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms