RNA–Protein interactions for RNA: ENST00000515939.1

RNU4ATAC11P-201, Transcript of RNA, U4atac small nuclear 11, pseudogene, humanhuman

BASIC

Gene RNU4ATAC11P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC11P-201ENST00000515939 LACTBP83111 547 aaPredicted RBP1.59□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 AIMP1Q12904 312 aaKnown RBP1.59□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 CNGB1Q14028 1251 aaPredicted RBP1.59□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 VGLL4Q14135 290 aa1.59□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 RASA3Q14644 834 aa1.59□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 LRIT3Q3SXY7 679 aa1.59□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 PARP10Q53GL7 1025 aa1.59□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 CDCA8Q53HL2 280 aa1.59□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 DDX46Q7L014 1031 aaKnown RBP1.59□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 SH3BP5LQ7L8J4 393 aa1.59□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 USP17L1Q7RTZ2 530 aa1.59□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 CCDC84Q86UT8 332 aaPredicted RBP1.59□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 KIAA0825Q8IV33 1275 aa1.59□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 PHF6Q8IWS0 365 aaKnown RBP eCLIP1.59□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 REM2Q8IYK8 340 aaPredicted RBP1.59□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 DEFB123Q8N688 67 aa1.59□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 TSPYL6Q8N831 410 aa1.59□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 C8orf58Q8NAV2 365 aa1.59□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 SUPT20HQ8NEM7 779 aa1.59□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 HELBQ8NG08 1087 aaPredicted RBP1.59□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 TTLL11Q8NHH1 800 aa1.59□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 DDX55Q8NHQ9 600 aaKnown RBP eCLIP1.59□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 ANKS1AQ92625 1134 aa1.59□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 ZKSCAN4Q969J2 545 aaPredicted RBP1.59□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 VWCEQ96DN2 955 aa1.59□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 SLC10A4Q96EP9 437 aa1.59□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 KAZALD1Q96I82 304 aa1.59□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 PAWRQ96IZ0 340 aaKnown RBP1.59□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 TMEM39BQ9GZU3 492 aa1.59□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 GREM2Q9H772 168 aa1.59□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 ELP3Q9H9T3 547 aa1.59□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 CD209Q9NNX6 404 aa1.59□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 C11orf16Q9NQ32 467 aa1.59□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 PAK6Q9NQU5 681 aaPredicted RBP1.59□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 ZBTB4Q9P1Z0 1013 aaPredicted RBP1.59□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 FRMD4AQ9P2Q2 1039 aaPredicted RBP1.59□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 CPA4Q9UI42 421 aa1.59□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 GJD2Q9UKL4 321 aa1.59□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 ZMYND8Q9ULU4 1186 aaPredicted RBP1.59□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 LCTP09848 1927 aa1.59□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 GPR179Q6PRD1 2367 aa1.59□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 ZNF804BA4D1E1 1349 aa1.59□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 SH3TC1Q8TE82 1336 aa1.59□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 ATRXP46100 2492 aa1.59□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 DOCK6Q96HP0 2047 aa1.59□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 ZZEF1O43149 2961 aa1.59□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 ATRNL1Q5VV63 1379 aa1.59□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 MED23Q9ULK4 1368 aa1.59□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 OTOGLQ3ZCN5 2332 aa1.58□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 MYH1P12882 1939 aa1.58□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 ANKRD11Q6UB99 2663 aaPredicted RBP1.58□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 CCL15-CCL14A0A0B4J2E2 113 aa1.58□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 SPDYE5A6NIY4 337 aa1.58□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 PHF20L1A8MW92 1017 aa1.58□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 H7C1W4 665 aa1.58□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 NPHP1O15259 732 aa1.58□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 TLR2O60603 784 aa1.58□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 TAF5LO75529 589 aa1.58□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 PCCAP05165 728 aaPredicted RBP1.58□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 CSF1RP07333 972 aa1.58□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 U2AF1L5P0DN76 240 aaPredicted RBP1.58□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 CYP2C8P10632 490 aa1.58□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 IL1R1P14778 569 aa1.58□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 TMPOP42166 694 aaKnown RBP1.58□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 CCT4P50991 539 aaKnown RBP1.58□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 CACNB3P54284 484 aa1.58□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 INHBEP58166 350 aa1.58□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 MAP3K9P80192 1104 aa1.58□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 FOXO4P98177 505 aa1.58□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 U2AF1Q01081 240 aaKnown RBP eCLIP1.58□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 PRKCZQ05513 592 aa1.58□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 SREBF2Q12772 1141 aa1.58□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 ADGRE1Q14246 886 aa1.58□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 NFE2L2Q16236 605 aa1.58□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 CCL15Q16663 113 aa1.58□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 LRRC26Q2I0M4 334 aa1.58□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 SHROOM1Q2M3G4 852 aaPredicted RBP1.58□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 CWF19L2Q2TBE0 894 aaKnown RBP1.58□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 CFAP100Q494V2 611 aa1.58□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 SPDYE2Q495Y8 402 aa1.58□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 SLC9C1Q4G0N8 1177 aa1.58□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 C9orf50Q5SZB4 431 aa1.58□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 STRIP1Q5VSL9 837 aa1.58□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 LHX8Q68G74 356 aa1.58□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 TTLL5Q6EMB2 1281 aa1.58□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 FAM109BQ6ICB4 259 aaPredicted RBP1.58□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 APOBEC3HQ6NTF7 200 aaKnown RBP1.58□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 GPR153Q6NV75 609 aa1.58□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 KIF6Q6ZMV9 814 aa1.58□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 ANKRD13DQ6ZTN6 518 aa1.58□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 C15orf52Q6ZUT6 534 aaKnown RBP1.58□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 PPP1R42Q7Z4L9 355 aa1.58□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 ZBTB38Q8NAP3 1195 aaPredicted RBP1.58□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 PLBD2Q8NHP8 589 aa1.58□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 TDRD7Q8NHU6 1098 aaKnown RBP1.58□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 ZNF384Q8TF68 577 aa1.58□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 U2AF1L4Q8WU68 220 aaKnown RBP1.58□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 USP6NLQ92738 828 aa1.58□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 DPF3Q92784 378 aa1.58□□□□□ -2.16
RNU4ATAC11P-201ENST00000515939 OPTNQ96CV9 577 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms