RNA–Protein interactions for RNA: ENST00000515881.5

DDR1-280, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 956 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-280ENST00000515881 HDLBPQ00341 1268 aaKnown RBP24.34■■□□□ 1.49
DDR1-280ENST00000515881 LDLRAD1Q5T700 205 aa24.34■■□□□ 1.49
DDR1-280ENST00000515881 CLUAP1Q96AJ1 413 aa24.34■■□□□ 1.49
DDR1-280ENST00000515881 TDRD3Q9H7E2 651 aaKnown RBP24.34■■□□□ 1.49
DDR1-280ENST00000515881 RNF186Q9NXI6 227 aa24.34■■□□□ 1.49
DDR1-280ENST00000515881 ANGEL1Q9UNK9 670 aaKnown RBP24.34■■□□□ 1.49
DDR1-280ENST00000515881 MTX1Q13505 466 aa24.33■■□□□ 1.49
DDR1-280ENST00000515881 TNFAIP1Q13829 316 aa24.33■■□□□ 1.49
DDR1-280ENST00000515881 RASA3Q14644 834 aa24.33■■□□□ 1.49
DDR1-280ENST00000515881 SUPT20HL1Q3ZLR7 823 aa24.33■■□□□ 1.49
DDR1-280ENST00000515881 FZD1Q9UP38 647 aa24.33■■□□□ 1.49
DDR1-280ENST00000515881 SUGT1Q9Y2Z0 365 aa24.33■■□□□ 1.49
DDR1-280ENST00000515881 SRGAP3O43295 1099 aa24.32■■□□□ 1.48
DDR1-280ENST00000515881 ZKSCAN2Q63HK3 967 aa24.32■■□□□ 1.48
DDR1-280ENST00000515881 TRPA1O75762 1119 aa24.31■■□□□ 1.48
DDR1-280ENST00000515881 MAP3K11Q16584 847 aa24.31■■□□□ 1.48
DDR1-280ENST00000515881 NBPF12Q5TAG4 269 aaPredicted RBP24.31■■□□□ 1.48
DDR1-280ENST00000515881 TEKT1Q969V4 418 aa24.31■■□□□ 1.48
DDR1-280ENST00000515881 MAST3O60307 1309 aa24.31■■□□□ 1.48
DDR1-280ENST00000515881 ZBED9Q6R2W3 1325 aa24.31■■□□□ 1.48
DDR1-280ENST00000515881 ECM29Q5VYK3 1845 aa24.31■■□□□ 1.48
DDR1-280ENST00000515881 PPP1R12BO60237 982 aaPredicted RBP24.3■■□□□ 1.48
DDR1-280ENST00000515881 GNAI2P04899 355 aa24.3■■□□□ 1.48
DDR1-280ENST00000515881 WDR66Q8TBY9 1149 aa24.3■■□□□ 1.48
DDR1-280ENST00000515881 MRIQ9BWK5 157 aa24.3■■□□□ 1.48
DDR1-280ENST00000515881 TMEM57Q8N5G2 664 aa24.29■■□□□ 1.48
DDR1-280ENST00000515881 GNL3LQ9NVN8 582 aaKnown RBP24.29■■□□□ 1.48
DDR1-280ENST00000515881 TCP10L2B9ZVM9 353 aa24.28■■□□□ 1.48
DDR1-280ENST00000515881 MKRN3Q13064 507 aaKnown RBP24.28■■□□□ 1.48
DDR1-280ENST00000515881 ZDHHC15Q96MV8 337 aa24.28■■□□□ 1.48
DDR1-280ENST00000515881 ABHD8Q96I13 439 aa24.27■■□□□ 1.48
DDR1-280ENST00000515881 UNCXA6NJT0 531 aa24.26■■□□□ 1.47
DDR1-280ENST00000515881 SEMA3EO15041 775 aa24.26■■□□□ 1.47
DDR1-280ENST00000515881 ADORA1P30542 326 aa24.26■■□□□ 1.47
DDR1-280ENST00000515881 PHKA1P46020 1223 aa24.26■■□□□ 1.47
DDR1-280ENST00000515881 TNNI2P48788 182 aa24.26■■□□□ 1.47
DDR1-280ENST00000515881 SPRYD7Q5W111 196 aa24.26■■□□□ 1.47
DDR1-280ENST00000515881 HHIPL2Q6UWX4 724 aa24.26■■□□□ 1.47
DDR1-280ENST00000515881 SLC10A4Q96EP9 437 aa24.26■■□□□ 1.47
DDR1-280ENST00000515881 CLMNQ96JQ2 1002 aa24.26■■□□□ 1.47
DDR1-280ENST00000515881 TEPSINQ96N21 525 aa24.26■■□□□ 1.47
DDR1-280ENST00000515881 USP2O75604 605 aaPredicted RBP24.25■■□□□ 1.47
DDR1-280ENST00000515881 IREB2P48200 963 aaKnown RBP24.25■■□□□ 1.47
DDR1-280ENST00000515881 TM4SF4P48230 202 aa24.25■■□□□ 1.47
DDR1-280ENST00000515881 TFCP2Q12800 502 aa24.25■■□□□ 1.47
DDR1-280ENST00000515881 APOBEC3HQ6NTF7 200 aaKnown RBP24.25■■□□□ 1.47
DDR1-280ENST00000515881 TMEM39BQ9GZU3 492 aa24.25■■□□□ 1.47
DDR1-280ENST00000515881 ZBTB22O15209 634 aa24.24■■□□□ 1.47
DDR1-280ENST00000515881 CACNB3P54284 484 aa24.24■■□□□ 1.47
DDR1-280ENST00000515881 TIMM10P62072 90 aa24.24■■□□□ 1.47
DDR1-280ENST00000515881 SREBF2Q12772 1141 aa24.24■■□□□ 1.47
DDR1-280ENST00000515881 CCDC102BQ68D86 513 aa24.24■■□□□ 1.47
DDR1-280ENST00000515881 CDAN1Q8IWY9 1227 aa24.24■■□□□ 1.47
DDR1-280ENST00000515881 TMOD2Q9NZR1 351 aa24.24■■□□□ 1.47
DDR1-280ENST00000515881 DENND2AQ9ULE3 1009 aa24.24■■□□□ 1.47
DDR1-280ENST00000515881 AKAP2Q9Y2D5 859 aa24.24■■□□□ 1.47
DDR1-280ENST00000515881 PNMA6EA0A0J9YXQ4 647 aa24.23■■□□□ 1.47
DDR1-280ENST00000515881 PRDX5P30044 214 aa24.23■■□□□ 1.47
DDR1-280ENST00000515881 FTSJ3Q8IY81 847 aaKnown RBP24.23■■□□□ 1.47
DDR1-280ENST00000515881 SALL1Q9NSC2 1324 aa24.23■■□□□ 1.47
DDR1-280ENST00000515881 A0A1B0GUL7 405 aa24.22■■□□□ 1.47
DDR1-280ENST00000515881 ZBTB48P10074 688 aaPredicted RBP24.22■■□□□ 1.47
DDR1-280ENST00000515881 ANKRD13AQ8IZ07 590 aa24.22■■□□□ 1.47
DDR1-280ENST00000515881 WNK4Q96J92 1243 aa24.22■■□□□ 1.47
DDR1-280ENST00000515881 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.22■■□□□ 1.47
DDR1-280ENST00000515881 LDHBP07195 334 aaKnown RBP24.21■■□□□ 1.47
DDR1-280ENST00000515881 FKBP1CQ5VVH2 108 aa24.21■■□□□ 1.47
DDR1-280ENST00000515881 MCOLN1Q9GZU1 580 aa24.21■■□□□ 1.47
DDR1-280ENST00000515881 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.21■■□□□ 1.47
DDR1-280ENST00000515881 DGKZQ13574 1117 aa24.2■■□□□ 1.46
DDR1-280ENST00000515881 RASGRF1Q13972 1273 aa24.2■■□□□ 1.46
DDR1-280ENST00000515881 MVPQ14764 893 aaKnown RBP24.2■■□□□ 1.46
DDR1-280ENST00000515881 DIXDC1Q155Q3 683 aa24.2■■□□□ 1.46
DDR1-280ENST00000515881 FAM83AQ86UY5 434 aa24.2■■□□□ 1.46
DDR1-280ENST00000515881 XAGE2Q96GT9 111 aa24.2■■□□□ 1.46
DDR1-280ENST00000515881 DAGLAQ9Y4D2 1042 aa24.2■■□□□ 1.46
DDR1-280ENST00000515881 PDS5AQ29RF7 1337 aaKnown RBP24.19■■□□□ 1.46
DDR1-280ENST00000515881 MANSC4A6NHS7 340 aaPredicted RBP24.19■■□□□ 1.46
DDR1-280ENST00000515881 TBC1D8O95759 1140 aa24.19■■□□□ 1.46
DDR1-280ENST00000515881 RLBP1P12271 317 aa24.19■■□□□ 1.46
DDR1-280ENST00000515881 ITPRIPQ8IWB1 547 aa24.19■■□□□ 1.46
DDR1-280ENST00000515881 G3BP1Q13283 466 aaKnown RBP eCLIP24.18■■□□□ 1.46
DDR1-280ENST00000515881 ZGPATQ8N5A5 531 aaKnown RBP24.18■■□□□ 1.46
DDR1-280ENST00000515881 INHBEP58166 350 aa24.17■■□□□ 1.46
DDR1-280ENST00000515881 POLA2Q14181 598 aa24.17■■□□□ 1.46
DDR1-280ENST00000515881 NEUROD6Q96NK8 337 aa24.17■■□□□ 1.46
DDR1-280ENST00000515881 AKAP11Q9UKA4 1901 aa24.17■■□□□ 1.46
DDR1-280ENST00000515881 ZBTB7BO15156 539 aaPredicted RBP24.16■■□□□ 1.46
DDR1-280ENST00000515881 GJA5P36382 358 aa24.16■■□□□ 1.46
DDR1-280ENST00000515881 ATP8B2P98198 1209 aa24.16■■□□□ 1.46
DDR1-280ENST00000515881 CDC42EP5Q6NZY7 148 aa24.16■■□□□ 1.46
DDR1-280ENST00000515881 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.16■■□□□ 1.46
DDR1-280ENST00000515881 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.16■■□□□ 1.46
DDR1-280ENST00000515881 SSH3Q8TE77 659 aa24.16■■□□□ 1.46
DDR1-280ENST00000515881 CFHR5Q9BXR6 569 aa24.16■■□□□ 1.46
DDR1-280ENST00000515881 C1orf115Q9H7X2 142 aa24.16■■□□□ 1.46
DDR1-280ENST00000515881 ELP3Q9H9T3 547 aa24.16■■□□□ 1.46
DDR1-280ENST00000515881 CASP8AP2Q9UKL3 1982 aa24.16■■□□□ 1.46
DDR1-280ENST00000515881 RPAP1Q9BWH6 1393 aaPredicted RBP24.16■■□□□ 1.46
DDR1-280ENST00000515881 MYH13Q9UKX3 1938 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms