RNA–Protein interactions for RNA: ENST00000515748.2

CSNK1A1-206, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 2 BASIC

Gene CSNK1A1, Length 620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-206ENST00000515748 FAM161BQ96MY7 647 aa11.8□□□□□ -0.52
CSNK1A1-206ENST00000515748 MXD3Q9BW11 206 aa11.8□□□□□ -0.52
CSNK1A1-206ENST00000515748 BIN2Q9UBW5 565 aaPredicted RBP11.8□□□□□ -0.52
CSNK1A1-206ENST00000515748 RIPOR2Q9Y4F9 1068 aa11.8□□□□□ -0.52
CSNK1A1-206ENST00000515748 TAF1P21675 1872 aa11.8□□□□□ -0.52
CSNK1A1-206ENST00000515748 IRS2Q9Y4H2 1338 aa11.8□□□□□ -0.52
CSNK1A1-206ENST00000515748 DDX60Q8IY21 1712 aaKnown RBP11.8□□□□□ -0.52
CSNK1A1-206ENST00000515748 MUC3AQ02505 3323 aa11.8□□□□□ -0.52
CSNK1A1-206ENST00000515748 PRUNE2Q8WUY3 3088 aa11.79□□□□□ -0.52
CSNK1A1-206ENST00000515748 GRM8O00222 908 aa11.79□□□□□ -0.52
CSNK1A1-206ENST00000515748 PDE8AO60658 829 aa11.79□□□□□ -0.52
CSNK1A1-206ENST00000515748 USP2O75604 605 aaPredicted RBP11.79□□□□□ -0.52
CSNK1A1-206ENST00000515748 BCAR3O75815 825 aa11.79□□□□□ -0.52
CSNK1A1-206ENST00000515748 UFL1O94874 794 aa11.79□□□□□ -0.52
CSNK1A1-206ENST00000515748 TFRCP02786 760 aaKnown RBP11.79□□□□□ -0.52
CSNK1A1-206ENST00000515748 CCT4P50991 539 aaKnown RBP11.79□□□□□ -0.52
CSNK1A1-206ENST00000515748 ATF7IPQ6VMQ6 1270 aa11.79□□□□□ -0.52
CSNK1A1-206ENST00000515748 UBE3BQ7Z3V4 1068 aa11.79□□□□□ -0.52
CSNK1A1-206ENST00000515748 BRI3BPQ8WY22 251 aa11.79□□□□□ -0.52
CSNK1A1-206ENST00000515748 TRIM47Q96LD4 638 aa11.79□□□□□ -0.52
CSNK1A1-206ENST00000515748 ANKIB1Q9P2G1 1089 aa11.79□□□□□ -0.52
CSNK1A1-206ENST00000515748 SRRDQ9UH36 339 aa11.79□□□□□ -0.52
CSNK1A1-206ENST00000515748 GGA1Q9UJY5 639 aa11.79□□□□□ -0.52
CSNK1A1-206ENST00000515748 ZMYND8Q9ULU4 1186 aaPredicted RBP11.79□□□□□ -0.52
CSNK1A1-206ENST00000515748 TLR2O60603 784 aa11.78□□□□□ -0.52
CSNK1A1-206ENST00000515748 TRIM27P14373 513 aa11.78□□□□□ -0.52
CSNK1A1-206ENST00000515748 HOXD10P28358 340 aa11.78□□□□□ -0.52
CSNK1A1-206ENST00000515748 MAGEA10P43363 369 aaPredicted RBP11.78□□□□□ -0.52
CSNK1A1-206ENST00000515748 IREB2P48200 963 aaKnown RBP11.78□□□□□ -0.52
CSNK1A1-206ENST00000515748 CTSWP56202 376 aa11.78□□□□□ -0.52
CSNK1A1-206ENST00000515748 UBXN2AP68543 259 aa11.78□□□□□ -0.52
CSNK1A1-206ENST00000515748 SUPT20HL1Q3ZLR7 823 aa11.78□□□□□ -0.52
CSNK1A1-206ENST00000515748 SLC4A10Q6U841 1118 aa11.78□□□□□ -0.52
CSNK1A1-206ENST00000515748 ANKRD13AQ8IZ07 590 aa11.78□□□□□ -0.52
CSNK1A1-206ENST00000515748 FAM43AQ8N2R8 423 aa11.78□□□□□ -0.52
CSNK1A1-206ENST00000515748 RAET1EQ8TD07 263 aa11.78□□□□□ -0.52
CSNK1A1-206ENST00000515748 OPTNQ96CV9 577 aa11.78□□□□□ -0.52
CSNK1A1-206ENST00000515748 UBE2OQ9C0C9 1292 aaKnown RBP11.78□□□□□ -0.52
CSNK1A1-206ENST00000515748 EYSQ5T1H1 3165 aa11.78□□□□□ -0.52
CSNK1A1-206ENST00000515748 ZNF646O15015 1829 aaPredicted RBP11.77□□□□□ -0.52
CSNK1A1-206ENST00000515748 TMEM265A0A087WTH1 108 aa11.77□□□□□ -0.53
CSNK1A1-206ENST00000515748 CCL15-CCL14A0A0B4J2E2 113 aa11.77□□□□□ -0.53
CSNK1A1-206ENST00000515748 WDHD1O75717 1129 aaPredicted RBP11.77□□□□□ -0.53
CSNK1A1-206ENST00000515748 MMP14P50281 582 aa11.77□□□□□ -0.53
CSNK1A1-206ENST00000515748 MAP3K12Q12852 859 aa11.77□□□□□ -0.53
CSNK1A1-206ENST00000515748 CCL15Q16663 113 aa11.77□□□□□ -0.53
CSNK1A1-206ENST00000515748 CCDC152Q4G0S7 254 aa11.77□□□□□ -0.53
CSNK1A1-206ENST00000515748 DACT2Q5SW24 774 aa11.77□□□□□ -0.53
CSNK1A1-206ENST00000515748 MAFAQ8NHW3 353 aaPredicted RBP11.77□□□□□ -0.53
CSNK1A1-206ENST00000515748 PAWRQ96IZ0 340 aaKnown RBP11.77□□□□□ -0.53
CSNK1A1-206ENST00000515748 UNC93B1Q9H1C4 597 aa11.77□□□□□ -0.53
CSNK1A1-206ENST00000515748 CSF1RP07333 972 aa11.76□□□□□ -0.53
CSNK1A1-206ENST00000515748 SYN1P17600 705 aa11.76□□□□□ -0.53
CSNK1A1-206ENST00000515748 CAPN2P17655 700 aa11.76□□□□□ -0.53
CSNK1A1-206ENST00000515748 CTGFP29279 349 aa11.76□□□□□ -0.53
CSNK1A1-206ENST00000515748 PSMC4P43686 418 aa11.76□□□□□ -0.53
CSNK1A1-206ENST00000515748 GTF2A2P52657 109 aa11.76□□□□□ -0.53
CSNK1A1-206ENST00000515748 RTL5Q5HYW3 569 aaPredicted RBP11.76□□□□□ -0.53
CSNK1A1-206ENST00000515748 ZKSCAN2Q63HK3 967 aa11.76□□□□□ -0.53
CSNK1A1-206ENST00000515748 C7orf61Q8IZ16 206 aa11.76□□□□□ -0.53
CSNK1A1-206ENST00000515748 TTLL11Q8NHH1 800 aa11.76□□□□□ -0.53
CSNK1A1-206ENST00000515748 ZBED3Q96IU2 234 aaPredicted RBP11.76□□□□□ -0.53
CSNK1A1-206ENST00000515748 ELP3Q9H9T3 547 aa11.76□□□□□ -0.53
CSNK1A1-206ENST00000515748 LRRC37AA6NMS7 1700 aa11.76□□□□□ -0.53
CSNK1A1-206ENST00000515748 NBPF7P0C2Y1 421 aaPredicted RBP11.75□□□□□ -0.53
CSNK1A1-206ENST00000515748 OSBPP22059 807 aa11.75□□□□□ -0.53
CSNK1A1-206ENST00000515748 NBPF12Q5TAG4 269 aaPredicted RBP11.75□□□□□ -0.53
CSNK1A1-206ENST00000515748 HELBQ8NG08 1087 aaPredicted RBP11.75□□□□□ -0.53
CSNK1A1-206ENST00000515748 CDX2Q99626 313 aaPredicted RBP11.75□□□□□ -0.53
CSNK1A1-206ENST00000515748 USP44Q9H0E7 712 aa11.75□□□□□ -0.53
CSNK1A1-206ENST00000515748 C9orf78Q9NZ63 289 aaPredicted RBP11.75□□□□□ -0.53
CSNK1A1-206ENST00000515748 RCAN3Q9UKA8 241 aa11.75□□□□□ -0.53
CSNK1A1-206ENST00000515748 FMNL1O95466 1100 aaPredicted RBP11.74□□□□□ -0.53
CSNK1A1-206ENST00000515748 FOXO4P98177 505 aa11.74□□□□□ -0.53
CSNK1A1-206ENST00000515748 RABL6Q3YEC7 729 aaPredicted RBP11.74□□□□□ -0.53
CSNK1A1-206ENST00000515748 NECAB2Q7Z6G3 386 aa11.74□□□□□ -0.53
CSNK1A1-206ENST00000515748 CNKSR2Q8WXI2 1034 aa11.74□□□□□ -0.53
CSNK1A1-206ENST00000515748 JARID2Q92833 1246 aaPredicted RBP11.74□□□□□ -0.53
CSNK1A1-206ENST00000515748 FRAT1Q92837 279 aaPredicted RBP11.74□□□□□ -0.53
CSNK1A1-206ENST00000515748 KAZALD1Q96I82 304 aa11.74□□□□□ -0.53
CSNK1A1-206ENST00000515748 YTHDC1Q96MU7 727 aaKnown RBP11.74□□□□□ -0.53
CSNK1A1-206ENST00000515748 PPP2R3BQ9Y5P8 575 aa11.74□□□□□ -0.53
CSNK1A1-206ENST00000515748 STRIP1Q5VSL9 837 aa11.73□□□□□ -0.53
CSNK1A1-206ENST00000515748 C17orf99Q6UX52 265 aa11.73□□□□□ -0.53
CSNK1A1-206ENST00000515748 MYO3BQ8WXR4 1341 aa11.73□□□□□ -0.53
CSNK1A1-206ENST00000515748 FBXW7Q969H0 707 aa11.73□□□□□ -0.53
CSNK1A1-206ENST00000515748 DEFB118Q96PH6 123 aa11.73□□□□□ -0.53
CSNK1A1-206ENST00000515748 CDC5LQ99459 802 aaKnown RBP11.73□□□□□ -0.53
CSNK1A1-206ENST00000515748 GREM2Q9H772 168 aa11.73□□□□□ -0.53
CSNK1A1-206ENST00000515748 HDAC5Q9UQL6 1122 aa11.73□□□□□ -0.53
CSNK1A1-206ENST00000515748 COL4A1P02462 1669 aa11.72□□□□□ -0.53
CSNK1A1-206ENST00000515748 SSC5DA1L4H1 1573 aa11.72□□□□□ -0.53
CSNK1A1-206ENST00000515748 MYPNQ86TC9 1320 aa11.72□□□□□ -0.53
CSNK1A1-206ENST00000515748 MS4A1P11836 297 aa11.72□□□□□ -0.53
CSNK1A1-206ENST00000515748 TJAP1Q5JTD0 557 aa11.72□□□□□ -0.53
CSNK1A1-206ENST00000515748 EPHA10Q5JZY3 1008 aa11.72□□□□□ -0.53
CSNK1A1-206ENST00000515748 KIAA0825Q8IV33 1275 aa11.72□□□□□ -0.53
CSNK1A1-206ENST00000515748 DZIP1LQ8IYY4 767 aaKnown RBP11.72□□□□□ -0.53
CSNK1A1-206ENST00000515748 SUCLG2Q96I99 432 aa11.72□□□□□ -0.53
CSNK1A1-206ENST00000515748 LAMA2P24043 3122 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms