RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 ZEB1P37275 1124 aaPredicted RBP18.93■□□□□ 0.62
DDR1-278ENST00000515233 CRKP46108 304 aa18.93■□□□□ 0.62
DDR1-278ENST00000515233 TNNI2P48788 182 aa18.93■□□□□ 0.62
DDR1-278ENST00000515233 TBC1D22AQ8WUA7 517 aa18.93■□□□□ 0.62
DDR1-278ENST00000515233 ERO1AQ96HE7 468 aa18.93■□□□□ 0.62
DDR1-278ENST00000515233 MRIQ9BWK5 157 aa18.93■□□□□ 0.62
DDR1-278ENST00000515233 PDE8BO95263 885 aa18.92■□□□□ 0.62
DDR1-278ENST00000515233 CRHR2Q13324 411 aa18.92■□□□□ 0.62
DDR1-278ENST00000515233 LRRC24Q50LG9 513 aa18.92■□□□□ 0.62
DDR1-278ENST00000515233 CAVIN4Q5BKX8 364 aa18.92■□□□□ 0.62
DDR1-278ENST00000515233 INTS3Q68E01 1043 aaKnown RBP18.92■□□□□ 0.62
DDR1-278ENST00000515233 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.92■□□□□ 0.62
DDR1-278ENST00000515233 VPS37DQ86XT2 251 aa18.92■□□□□ 0.62
DDR1-278ENST00000515233 MRPL50Q8N5N7 158 aaKnown RBP18.92■□□□□ 0.62
DDR1-278ENST00000515233 ANKRD44Q8N8A2 993 aa18.92■□□□□ 0.62
DDR1-278ENST00000515233 VGLL2Q8N8G2 317 aa18.92■□□□□ 0.62
DDR1-278ENST00000515233 OPTNQ96CV9 577 aa18.92■□□□□ 0.62
DDR1-278ENST00000515233 MS4A4AQ96JQ5 239 aa18.92■□□□□ 0.62
DDR1-278ENST00000515233 ELP3Q9H9T3 547 aa18.92■□□□□ 0.62
DDR1-278ENST00000515233 PCDH10Q9P2E7 1040 aa18.92■□□□□ 0.62
DDR1-278ENST00000515233 GRIK5Q16478 980 aa18.91■□□□□ 0.62
DDR1-278ENST00000515233 PTPRCP08575 1304 aa18.91■□□□□ 0.62
DDR1-278ENST00000515233 OTOFQ9HC10 1997 aa18.9■□□□□ 0.62
DDR1-278ENST00000515233 TCP10L2B9ZVM9 353 aa18.9■□□□□ 0.62
DDR1-278ENST00000515233 MAP3K9P80192 1104 aa18.9■□□□□ 0.62
DDR1-278ENST00000515233 SP3Q02447 781 aa18.9■□□□□ 0.62
DDR1-278ENST00000515233 METTL24Q5JXM2 366 aa18.9■□□□□ 0.62
DDR1-278ENST00000515233 CDAN1Q8IWY9 1227 aa18.9■□□□□ 0.62
DDR1-278ENST00000515233 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.9■□□□□ 0.62
DDR1-278ENST00000515233 TMEM39BQ9GZU3 492 aa18.9■□□□□ 0.62
DDR1-278ENST00000515233 IQSEC3Q9UPP2 1182 aaPredicted RBP18.9■□□□□ 0.62
DDR1-278ENST00000515233 PTPN22Q9Y2R2 807 aa18.9■□□□□ 0.62
DDR1-278ENST00000515233 FRAT2O75474 233 aaPredicted RBP18.89■□□□□ 0.61
DDR1-278ENST00000515233 CD99L2Q8TCZ2 262 aa18.89■□□□□ 0.61
DDR1-278ENST00000515233 TEKT1Q969V4 418 aa18.89■□□□□ 0.61
DDR1-278ENST00000515233 USP44Q9H0E7 712 aa18.89■□□□□ 0.61
DDR1-278ENST00000515233 SUGT1Q9Y2Z0 365 aa18.89■□□□□ 0.61
DDR1-278ENST00000515233 CHAF1AQ13111 956 aaPredicted RBP18.88■□□□□ 0.61
DDR1-278ENST00000515233 VGLL4Q14135 290 aa18.88■□□□□ 0.61
DDR1-278ENST00000515233 ZDHHC15Q96MV8 337 aa18.88■□□□□ 0.61
DDR1-278ENST00000515233 EFCC1Q9HA90 598 aa18.88■□□□□ 0.61
DDR1-278ENST00000515233 KIF16BQ96L93 1317 aa18.88■□□□□ 0.61
DDR1-278ENST00000515233 HTTP42858 3142 aa18.87■□□□□ 0.61
DDR1-278ENST00000515233 FGFR2P21802 821 aa18.87■□□□□ 0.61
DDR1-278ENST00000515233 BCAMP50895 628 aa18.87■□□□□ 0.61
DDR1-278ENST00000515233 GTF2A2P52657 109 aa18.87■□□□□ 0.61
DDR1-278ENST00000515233 FKBP1CQ5VVH2 108 aa18.87■□□□□ 0.61
DDR1-278ENST00000515233 FAM83AQ86UY5 434 aa18.87■□□□□ 0.61
DDR1-278ENST00000515233 BRI3BPQ8WY22 251 aa18.87■□□□□ 0.61
DDR1-278ENST00000515233 CSADQ9Y600 493 aa18.87■□□□□ 0.61
DDR1-278ENST00000515233 KLHDC4Q8TBB5 520 aa18.86■□□□□ 0.61
DDR1-278ENST00000515233 CNKSR2Q8WXI2 1034 aa18.86■□□□□ 0.61
DDR1-278ENST00000515233 MAST3O60307 1309 aa18.85■□□□□ 0.61
DDR1-278ENST00000515233 CCL15-CCL14A0A0B4J2E2 113 aa18.85■□□□□ 0.61
DDR1-278ENST00000515233 E9PSI1 815 aa18.85■□□□□ 0.61
DDR1-278ENST00000515233 IFIT1P09914 478 aaKnown RBP18.85■□□□□ 0.61
DDR1-278ENST00000515233 PUM3Q15397 648 aaKnown RBP18.85■□□□□ 0.61
DDR1-278ENST00000515233 CCL15Q16663 113 aa18.85■□□□□ 0.61
DDR1-278ENST00000515233 APOBEC3HQ6NTF7 200 aaKnown RBP18.85■□□□□ 0.61
DDR1-278ENST00000515233 HHIPL2Q6UWX4 724 aa18.85■□□□□ 0.61
DDR1-278ENST00000515233 SSH1Q8WYL5 1049 aa18.85■□□□□ 0.61
DDR1-278ENST00000515233 ARMC5Q96C12 935 aa18.85■□□□□ 0.61
DDR1-278ENST00000515233 HOOK2Q96ED9 719 aa18.85■□□□□ 0.61
DDR1-278ENST00000515233 ZFYVE28Q9HCC9 887 aa18.85■□□□□ 0.61
DDR1-278ENST00000515233 POTEFA5A3E0 1075 aa18.84■□□□□ 0.61
DDR1-278ENST00000515233 SPDYE5A6NIY4 337 aa18.84■□□□□ 0.61
DDR1-278ENST00000515233 CACNB3P54284 484 aa18.84■□□□□ 0.61
DDR1-278ENST00000515233 CAP1Q01518 475 aa18.84■□□□□ 0.61
DDR1-278ENST00000515233 ARHGEF6Q15052 776 aa18.84■□□□□ 0.61
DDR1-278ENST00000515233 TAF1CQ15572 869 aaPredicted RBP18.84■□□□□ 0.61
DDR1-278ENST00000515233 OTUD5Q96G74 571 aa18.84■□□□□ 0.61
DDR1-278ENST00000515233 TMOD2Q9NZR1 351 aa18.84■□□□□ 0.61
DDR1-278ENST00000515233 RBBP6Q7Z6E9 1792 aaKnown RBP18.83■□□□□ 0.61
DDR1-278ENST00000515233 RFX5P48382 616 aaPredicted RBP18.83■□□□□ 0.6
DDR1-278ENST00000515233 ERO1BQ86YB8 467 aa18.83■□□□□ 0.6
DDR1-278ENST00000515233 ZCCHC17Q9NP64 241 aaKnown RBP18.83■□□□□ 0.6
DDR1-278ENST00000515233 SNCAIPQ9Y6H5 919 aa18.83■□□□□ 0.6
DDR1-278ENST00000515233 CENPFP49454 3210 aa18.82■□□□□ 0.6
DDR1-278ENST00000515233 EYA2O00167 538 aa18.82■□□□□ 0.6
DDR1-278ENST00000515233 SLFN5Q08AF3 891 aa18.82■□□□□ 0.6
DDR1-278ENST00000515233 ALDH1L2Q3SY69 923 aa18.82■□□□□ 0.6
DDR1-278ENST00000515233 FAM43AQ8N2R8 423 aa18.82■□□□□ 0.6
DDR1-278ENST00000515233 WDR66Q8TBY9 1149 aa18.82■□□□□ 0.6
DDR1-278ENST00000515233 LPIN2Q92539 896 aa18.82■□□□□ 0.6
DDR1-278ENST00000515233 RPAP1Q9BWH6 1393 aaPredicted RBP18.81■□□□□ 0.6
DDR1-278ENST00000515233 CETPP11597 493 aa18.81■□□□□ 0.6
DDR1-278ENST00000515233 ZKSCAN4Q969J2 545 aaPredicted RBP18.81■□□□□ 0.6
DDR1-278ENST00000515233 WRNIP1Q96S55 665 aa18.81■□□□□ 0.6
DDR1-278ENST00000515233 FBXO3Q9UK99 471 aa18.81■□□□□ 0.6
DDR1-278ENST00000515233 IRF6O14896 467 aa18.8■□□□□ 0.6
DDR1-278ENST00000515233 TLR2O60603 784 aa18.8■□□□□ 0.6
DDR1-278ENST00000515233 WDHD1O75717 1129 aaPredicted RBP18.8■□□□□ 0.6
DDR1-278ENST00000515233 SLC5A1P13866 664 aa18.8■□□□□ 0.6
DDR1-278ENST00000515233 DCAF15Q66K64 600 aa18.8■□□□□ 0.6
DDR1-278ENST00000515233 ATG9AQ7Z3C6 839 aa18.8■□□□□ 0.6
DDR1-278ENST00000515233 FAM151AQ8WW52 585 aa18.8■□□□□ 0.6
DDR1-278ENST00000515233 GCC1Q96CN9 775 aa18.8■□□□□ 0.6
DDR1-278ENST00000515233 PPATQ06203 517 aa18.79■□□□□ 0.6
DDR1-278ENST00000515233 PPIL2Q13356 520 aa18.79■□□□□ 0.6
DDR1-278ENST00000515233 SNAPC2Q13487 334 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms