RNA–Protein interactions for RNA: ENST00000515145.1

TNFRSF25-220, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 4

Gene TNFRSF25, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-220ENST00000515145 PPP1R12BO60237 982 aaPredicted RBP20.45■□□□□ 0.86
TNFRSF25-220ENST00000515145 SLC5A1P13866 664 aa20.45■□□□□ 0.86
TNFRSF25-220ENST00000515145 TM4SF4P48230 202 aa20.45■□□□□ 0.86
TNFRSF25-220ENST00000515145 TNFAIP1Q13829 316 aa20.45■□□□□ 0.86
TNFRSF25-220ENST00000515145 LPIN2Q92539 896 aa20.45■□□□□ 0.86
TNFRSF25-220ENST00000515145 ARHGAP45Q92619 1136 aa20.45■□□□□ 0.86
TNFRSF25-220ENST00000515145 FBXO3Q9UK99 471 aa20.45■□□□□ 0.86
TNFRSF25-220ENST00000515145 MYH13Q9UKX3 1938 aa20.45■□□□□ 0.86
TNFRSF25-220ENST00000515145 CIAO1O76071 339 aa20.44■□□□□ 0.86
TNFRSF25-220ENST00000515145 HDLBPQ00341 1268 aaKnown RBP20.44■□□□□ 0.86
TNFRSF25-220ENST00000515145 SREBF2Q12772 1141 aa20.44■□□□□ 0.86
TNFRSF25-220ENST00000515145 CLMNQ96JQ2 1002 aa20.44■□□□□ 0.86
TNFRSF25-220ENST00000515145 SIL1Q9H173 461 aa20.44■□□□□ 0.86
TNFRSF25-220ENST00000515145 OTOFQ9HC10 1997 aa20.44■□□□□ 0.86
TNFRSF25-220ENST00000515145 LAMB1P07942 1786 aa20.44■□□□□ 0.86
TNFRSF25-220ENST00000515145 INTS3Q68E01 1043 aaKnown RBP20.43■□□□□ 0.86
TNFRSF25-220ENST00000515145 CDAN1Q8IWY9 1227 aa20.43■□□□□ 0.86
TNFRSF25-220ENST00000515145 HDAC5Q9UQL6 1122 aa20.43■□□□□ 0.86
TNFRSF25-220ENST00000515145 UNCXA6NJT0 531 aa20.42■□□□□ 0.86
TNFRSF25-220ENST00000515145 TEKT1Q969V4 418 aa20.42■□□□□ 0.86
TNFRSF25-220ENST00000515145 WNK4Q96J92 1243 aa20.42■□□□□ 0.86
TNFRSF25-220ENST00000515145 TEPSINQ96N21 525 aa20.42■□□□□ 0.86
TNFRSF25-220ENST00000515145 PA2G4Q9UQ80 394 aaKnown RBP20.42■□□□□ 0.86
TNFRSF25-220ENST00000515145 SUGT1Q9Y2Z0 365 aa20.42■□□□□ 0.86
TNFRSF25-220ENST00000515145 PDE4DIPQ5VU43 2346 aa20.41■□□□□ 0.86
TNFRSF25-220ENST00000515145 TCP10L2B9ZVM9 353 aa20.41■□□□□ 0.86
TNFRSF25-220ENST00000515145 USP2O75604 605 aaPredicted RBP20.41■□□□□ 0.86
TNFRSF25-220ENST00000515145 TBC1D8O95759 1140 aa20.41■□□□□ 0.86
TNFRSF25-220ENST00000515145 IREB2P48200 963 aaKnown RBP20.41■□□□□ 0.86
TNFRSF25-220ENST00000515145 ATP2B3Q16720 1220 aa20.41■□□□□ 0.86
TNFRSF25-220ENST00000515145 SLC10A4Q96EP9 437 aa20.41■□□□□ 0.86
TNFRSF25-220ENST00000515145 CEP126Q9P2H0 1117 aa20.41■□□□□ 0.86
TNFRSF25-220ENST00000515145 MAST3O60307 1309 aa20.41■□□□□ 0.86
TNFRSF25-220ENST00000515145 TNRC18O15417 2968 aaPredicted RBP20.4■□□□□ 0.86
TNFRSF25-220ENST00000515145 ZBTB48P10074 688 aaPredicted RBP20.4■□□□□ 0.86
TNFRSF25-220ENST00000515145 IL15P40933 162 aaPredicted RBP20.4■□□□□ 0.86
TNFRSF25-220ENST00000515145 CTU1Q7Z7A3 348 aaKnown RBP20.4■□□□□ 0.86
TNFRSF25-220ENST00000515145 ZDHHC15Q96MV8 337 aa20.4■□□□□ 0.86
TNFRSF25-220ENST00000515145 TMEM39BQ9GZU3 492 aa20.4■□□□□ 0.86
TNFRSF25-220ENST00000515145 COPRSQ9NQ92 184 aa20.4■□□□□ 0.86
TNFRSF25-220ENST00000515145 MANSC4A6NHS7 340 aaPredicted RBP20.39■□□□□ 0.85
TNFRSF25-220ENST00000515145 TRIM27P14373 513 aa20.39■□□□□ 0.85
TNFRSF25-220ENST00000515145 TNNI2P48788 182 aa20.39■□□□□ 0.85
TNFRSF25-220ENST00000515145 ANKRD13AQ8IZ07 590 aa20.39■□□□□ 0.85
TNFRSF25-220ENST00000515145 WDR66Q8TBY9 1149 aa20.39■□□□□ 0.85
TNFRSF25-220ENST00000515145 MRIQ9BWK5 157 aa20.39■□□□□ 0.85
TNFRSF25-220ENST00000515145 CFHR5Q9BXR6 569 aa20.39■□□□□ 0.85
TNFRSF25-220ENST00000515145 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.39■□□□□ 0.85
TNFRSF25-220ENST00000515145 TNNQ9UQP3 1299 aa20.39■□□□□ 0.85
TNFRSF25-220ENST00000515145 GNAI3P08754 354 aa20.38■□□□□ 0.85
TNFRSF25-220ENST00000515145 GJA5P36382 358 aa20.38■□□□□ 0.85
TNFRSF25-220ENST00000515145 CACNB3P54284 484 aa20.38■□□□□ 0.85
TNFRSF25-220ENST00000515145 NOM1Q5C9Z4 860 aaKnown RBP20.38■□□□□ 0.85
TNFRSF25-220ENST00000515145 APOBEC3HQ6NTF7 200 aaKnown RBP20.38■□□□□ 0.85
TNFRSF25-220ENST00000515145 ZNF296Q8WUU4 475 aaPredicted RBP20.38■□□□□ 0.85
TNFRSF25-220ENST00000515145 GPR25O00155 361 aa20.37■□□□□ 0.85
TNFRSF25-220ENST00000515145 BCAR3O75815 825 aa20.37■□□□□ 0.85
TNFRSF25-220ENST00000515145 MTX1Q13505 466 aa20.37■□□□□ 0.85
TNFRSF25-220ENST00000515145 HHIPL2Q6UWX4 724 aa20.37■□□□□ 0.85
TNFRSF25-220ENST00000515145 ATF7IPQ6VMQ6 1270 aa20.37■□□□□ 0.85
TNFRSF25-220ENST00000515145 MIER1Q8N108 512 aa20.37■□□□□ 0.85
TNFRSF25-220ENST00000515145 R3HDMLQ9H3Y0 253 aa20.37■□□□□ 0.85
TNFRSF25-220ENST00000515145 IPO8O15397 1037 aaKnown RBP20.36■□□□□ 0.85
TNFRSF25-220ENST00000515145 PHKA1P46020 1223 aa20.36■□□□□ 0.85
TNFRSF25-220ENST00000515145 IFNL1Q8IU54 200 aa20.36■□□□□ 0.85
TNFRSF25-220ENST00000515145 TMOD2Q9NZR1 351 aa20.36■□□□□ 0.85
TNFRSF25-220ENST00000515145 RPAP1Q9BWH6 1393 aaPredicted RBP20.35■□□□□ 0.85
TNFRSF25-220ENST00000515145 IGF2BP3O00425 579 aaKnown RBP eCLIP20.35■□□□□ 0.85
TNFRSF25-220ENST00000515145 ALDH1A1P00352 501 aa20.35■□□□□ 0.85
TNFRSF25-220ENST00000515145 PRDX5P30044 214 aa20.35■□□□□ 0.85
TNFRSF25-220ENST00000515145 ADORA1P30542 326 aa20.35■□□□□ 0.85
TNFRSF25-220ENST00000515145 INHBEP58166 350 aa20.35■□□□□ 0.85
TNFRSF25-220ENST00000515145 FKBP1CQ5VVH2 108 aa20.35■□□□□ 0.85
TNFRSF25-220ENST00000515145 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.35■□□□□ 0.85
TNFRSF25-220ENST00000515145 FRAT1Q92837 279 aaPredicted RBP20.35■□□□□ 0.85
TNFRSF25-220ENST00000515145 ELP3Q9H9T3 547 aa20.35■□□□□ 0.85
TNFRSF25-220ENST00000515145 GNL3LQ9NVN8 582 aaKnown RBP20.35■□□□□ 0.85
TNFRSF25-220ENST00000515145 SALL1Q9NSC2 1324 aa20.34■□□□□ 0.85
TNFRSF25-220ENST00000515145 SEMA3EO15041 775 aa20.34■□□□□ 0.85
TNFRSF25-220ENST00000515145 ZBTB22O15209 634 aa20.34■□□□□ 0.85
TNFRSF25-220ENST00000515145 SRGAP3O43295 1099 aa20.34■□□□□ 0.85
TNFRSF25-220ENST00000515145 HNRNPUQ00839 825 aaKnown RBP eCLIP20.34■□□□□ 0.85
TNFRSF25-220ENST00000515145 FAM83AQ86UY5 434 aa20.34■□□□□ 0.85
TNFRSF25-220ENST00000515145 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.34■□□□□ 0.85
TNFRSF25-220ENST00000515145 DAGLAQ9Y4D2 1042 aa20.34■□□□□ 0.85
TNFRSF25-220ENST00000515145 VGLL4Q14135 290 aa20.33■□□□□ 0.85
TNFRSF25-220ENST00000515145 DIXDC1Q155Q3 683 aa20.33■□□□□ 0.85
TNFRSF25-220ENST00000515145 CLUAP1Q96AJ1 413 aa20.33■□□□□ 0.85
TNFRSF25-220ENST00000515145 OPTNQ96CV9 577 aa20.33■□□□□ 0.85
TNFRSF25-220ENST00000515145 DENND2AQ9ULE3 1009 aa20.33■□□□□ 0.85
TNFRSF25-220ENST00000515145 FKTNO75072 461 aa20.32■□□□□ 0.84
TNFRSF25-220ENST00000515145 MAP3K9P80192 1104 aa20.32■□□□□ 0.84
TNFRSF25-220ENST00000515145 DIEXFQ68CQ4 756 aaKnown RBP20.32■□□□□ 0.84
TNFRSF25-220ENST00000515145 CCDC102BQ68D86 513 aa20.32■□□□□ 0.84
TNFRSF25-220ENST00000515145 TESPA1A2RU30 521 aaPredicted RBP20.31■□□□□ 0.84
TNFRSF25-220ENST00000515145 GNAI2P04899 355 aa20.31■□□□□ 0.84
TNFRSF25-220ENST00000515145 LDHBP07195 334 aaKnown RBP20.31■□□□□ 0.84
TNFRSF25-220ENST00000515145 CNKSR2Q8WXI2 1034 aa20.31■□□□□ 0.84
TNFRSF25-220ENST00000515145 A0A1B0GUL7 405 aa20.3■□□□□ 0.84
TNFRSF25-220ENST00000515145 TIMM10P62072 90 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms