RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 KIF23Q02241 960 aaPredicted RBP30.38■■■□□ 2.45
SNF8-213ENST00000514929 ARMC9Q7Z3E5 817 aa30.38■■■□□ 2.45
SNF8-213ENST00000514929 RASAL3Q86YV0 1011 aa30.38■■■□□ 2.45
SNF8-213ENST00000514929 ITPRIPQ8IWB1 547 aa30.38■■■□□ 2.45
SNF8-213ENST00000514929 WDR66Q8TBY9 1149 aa30.38■■■□□ 2.45
SNF8-213ENST00000514929 TDRD3Q9H7E2 651 aaKnown RBP30.38■■■□□ 2.45
SNF8-213ENST00000514929 HDLBPQ00341 1268 aaKnown RBP30.37■■■□□ 2.45
SNF8-213ENST00000514929 SPDYE2Q495Y8 402 aa30.37■■■□□ 2.45
SNF8-213ENST00000514929 TEKT1Q969V4 418 aa30.37■■■□□ 2.45
SNF8-213ENST00000514929 ZNF70Q9UC06 446 aaPredicted RBP30.37■■■□□ 2.45
SNF8-213ENST00000514929 SUGT1Q9Y2Z0 365 aa30.37■■■□□ 2.45
SNF8-213ENST00000514929 TSKSQ9UJT2 592 aa30.36■■■□□ 2.45
SNF8-213ENST00000514929 MAST3O60307 1309 aa30.36■■■□□ 2.45
SNF8-213ENST00000514929 PNMA6EA0A0J9YXQ4 647 aa30.35■■■□□ 2.45
SNF8-213ENST00000514929 TFCP2Q12800 502 aa30.35■■■□□ 2.45
SNF8-213ENST00000514929 TNFAIP1Q13829 316 aa30.35■■■□□ 2.45
SNF8-213ENST00000514929 RASA3Q14644 834 aa30.35■■■□□ 2.45
SNF8-213ENST00000514929 AKAP2Q9Y2D5 859 aa30.35■■■□□ 2.45
SNF8-213ENST00000514929 RLBP1P12271 317 aa30.34■■■□□ 2.45
SNF8-213ENST00000514929 ADORA1P30542 326 aa30.34■■■□□ 2.45
SNF8-213ENST00000514929 PHKA1P46020 1223 aa30.34■■■□□ 2.45
SNF8-213ENST00000514929 TIMM10P62072 90 aa30.34■■■□□ 2.45
SNF8-213ENST00000514929 SUPT20HL1Q3ZLR7 823 aa30.34■■■□□ 2.45
SNF8-213ENST00000514929 ANGEL1Q9UNK9 670 aaKnown RBP30.34■■■□□ 2.45
SNF8-213ENST00000514929 A0A1B0GUL7 405 aa30.32■■■□□ 2.44
SNF8-213ENST00000514929 SEMA3EO15041 775 aa30.32■■■□□ 2.44
SNF8-213ENST00000514929 PPP1R12BO60237 982 aaPredicted RBP30.32■■■□□ 2.44
SNF8-213ENST00000514929 G3BP1Q13283 466 aaKnown RBP eCLIP30.32■■■□□ 2.44
SNF8-213ENST00000514929 MRIQ9BWK5 157 aa30.32■■■□□ 2.44
SNF8-213ENST00000514929 DENND2AQ9ULE3 1009 aa30.32■■■□□ 2.44
SNF8-213ENST00000514929 NBPF12Q5TAG4 269 aaPredicted RBP30.31■■■□□ 2.44
SNF8-213ENST00000514929 CCDC102BQ68D86 513 aa30.31■■■□□ 2.44
SNF8-213ENST00000514929 ZDHHC15Q96MV8 337 aa30.31■■■□□ 2.44
SNF8-213ENST00000514929 C1orf115Q9H7X2 142 aa30.31■■■□□ 2.44
SNF8-213ENST00000514929 FZD1Q9UP38 647 aa30.31■■■□□ 2.44
SNF8-213ENST00000514929 SSC5DA1L4H1 1573 aa30.3■■■□□ 2.44
SNF8-213ENST00000514929 TCP10L2B9ZVM9 353 aa30.3■■■□□ 2.44
SNF8-213ENST00000514929 TNNI2P48788 182 aa30.3■■■□□ 2.44
SNF8-213ENST00000514929 ZBTB7BO15156 539 aaPredicted RBP30.29■■■□□ 2.44
SNF8-213ENST00000514929 REM2Q8IYK8 340 aaPredicted RBP30.29■■■□□ 2.44
SNF8-213ENST00000514929 XAGE2Q96GT9 111 aa30.29■■■□□ 2.44
SNF8-213ENST00000514929 NEUROD6Q96NK8 337 aa30.29■■■□□ 2.44
SNF8-213ENST00000514929 CSRNP1Q96S65 589 aa30.29■■■□□ 2.44
SNF8-213ENST00000514929 ATP8B2P98198 1209 aa30.28■■■□□ 2.44
SNF8-213ENST00000514929 MVPQ14764 893 aaKnown RBP30.28■■■□□ 2.44
SNF8-213ENST00000514929 LDLRAD1Q5T700 205 aa30.28■■■□□ 2.44
SNF8-213ENST00000514929 HHIPL2Q6UWX4 724 aa30.28■■■□□ 2.44
SNF8-213ENST00000514929 PANK1Q8TE04 598 aa30.28■■■□□ 2.44
SNF8-213ENST00000514929 TMOD2Q9NZR1 351 aa30.28■■■□□ 2.44
SNF8-213ENST00000514929 LDHBP07195 334 aaKnown RBP30.27■■■□□ 2.44
SNF8-213ENST00000514929 SALL1Q9NSC2 1324 aa30.26■■■□□ 2.44
SNF8-213ENST00000514929 MS4A1P11836 297 aa30.26■■■□□ 2.43
SNF8-213ENST00000514929 PRDX5P30044 214 aa30.26■■■□□ 2.43
SNF8-213ENST00000514929 POLA2Q14181 598 aa30.26■■■□□ 2.43
SNF8-213ENST00000514929 MAP3K11Q16584 847 aa30.26■■■□□ 2.43
SNF8-213ENST00000514929 SSH3Q8TE77 659 aa30.26■■■□□ 2.43
SNF8-213ENST00000514929 ZBTB4Q9P1Z0 1013 aaPredicted RBP30.26■■■□□ 2.43
SNF8-213ENST00000514929 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP30.26■■■□□ 2.43
SNF8-213ENST00000514929 CACNB3P54284 484 aa30.25■■■□□ 2.43
SNF8-213ENST00000514929 MKRN3Q13064 507 aaKnown RBP30.25■■■□□ 2.43
SNF8-213ENST00000514929 OS9Q13438 667 aaPredicted RBP30.25■■■□□ 2.43
SNF8-213ENST00000514929 GORABQ5T7V8 394 aa30.25■■■□□ 2.43
SNF8-213ENST00000514929 APOBEC3HQ6NTF7 200 aaKnown RBP30.25■■■□□ 2.43
SNF8-213ENST00000514929 SAGE1Q9NXZ1 904 aa30.25■■■□□ 2.43
SNF8-213ENST00000514929 ZBTB22O15209 634 aa30.24■■■□□ 2.43
SNF8-213ENST00000514929 TRPA1O75762 1119 aa30.24■■■□□ 2.43
SNF8-213ENST00000514929 IREB2P48200 963 aaKnown RBP30.24■■■□□ 2.43
SNF8-213ENST00000514929 RASGRF1Q13972 1273 aa30.24■■■□□ 2.43
SNF8-213ENST00000514929 ZGPATQ8N5A5 531 aaKnown RBP30.24■■■□□ 2.43
SNF8-213ENST00000514929 TMEM39BQ9GZU3 492 aa30.24■■■□□ 2.43
SNF8-213ENST00000514929 RNF186Q9NXI6 227 aa30.24■■■□□ 2.43
SNF8-213ENST00000514929 DIXDC1Q155Q3 683 aa30.23■■■□□ 2.43
SNF8-213ENST00000514929 SLC10A4Q96EP9 437 aa30.23■■■□□ 2.43
SNF8-213ENST00000514929 AKAP11Q9UKA4 1901 aa30.23■■■□□ 2.43
SNF8-213ENST00000514929 USP2O75604 605 aaPredicted RBP30.22■■■□□ 2.43
SNF8-213ENST00000514929 SURF6O75683 361 aaKnown RBP30.22■■■□□ 2.43
SNF8-213ENST00000514929 TEPSINQ96N21 525 aa30.22■■■□□ 2.43
SNF8-213ENST00000514929 RCAN3Q9UKA8 241 aa30.22■■■□□ 2.43
SNF8-213ENST00000514929 PDS5AQ29RF7 1337 aaKnown RBP30.22■■■□□ 2.43
SNF8-213ENST00000514929 CAPN15O75808 1086 aa30.21■■■□□ 2.43
SNF8-213ENST00000514929 CDAN1Q8IWY9 1227 aa30.21■■■□□ 2.43
SNF8-213ENST00000514929 CLMNQ96JQ2 1002 aa30.21■■■□□ 2.43
SNF8-213ENST00000514929 DAGLAQ9Y4D2 1042 aa30.21■■■□□ 2.43
SNF8-213ENST00000514929 UNCXA6NJT0 531 aa30.2■■■□□ 2.43
SNF8-213ENST00000514929 FKBP1CQ5VVH2 108 aa30.2■■■□□ 2.43
SNF8-213ENST00000514929 SPRYD7Q5W111 196 aa30.2■■■□□ 2.43
SNF8-213ENST00000514929 ABCF2Q9UG63 623 aa30.2■■■□□ 2.43
SNF8-213ENST00000514929 FAM83AQ86UY5 434 aa30.19■■■□□ 2.42
SNF8-213ENST00000514929 ANKRD13AQ8IZ07 590 aa30.19■■■□□ 2.42
SNF8-213ENST00000514929 SREBF2Q12772 1141 aa30.18■■■□□ 2.42
SNF8-213ENST00000514929 SPTY2D1Q68D10 685 aaPredicted RBP30.18■■■□□ 2.42
SNF8-213ENST00000514929 DZIP1Q86YF9 867 aaKnown RBP30.18■■■□□ 2.42
SNF8-213ENST00000514929 CEP85Q6P2H3 762 aa30.17■■■□□ 2.42
SNF8-213ENST00000514929 GPR108Q9NPR9 543 aa30.17■■■□□ 2.42
SNF8-213ENST00000514929 TM4SF4P48230 202 aa30.16■■■□□ 2.42
SNF8-213ENST00000514929 CDC42EP5Q6NZY7 148 aa30.16■■■□□ 2.42
SNF8-213ENST00000514929 WNK4Q96J92 1243 aa30.16■■■□□ 2.42
SNF8-213ENST00000514929 HMG20BQ9P0W2 317 aa30.16■■■□□ 2.42
SNF8-213ENST00000514929 NOP58Q9Y2X3 529 aaKnown RBP30.16■■■□□ 2.42
SNF8-213ENST00000514929 ZBTB48P10074 688 aaPredicted RBP30.15■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms