RNA–Protein interactions for RNA: ENST00000514909.1

LDHBP3-201, Transcript of lactate dehydrogenase B pseudogene 3, humanhuman

BASIC

Gene LDHBP3, Length 822 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHBP3-201ENST00000514909 TMX1Q9H3N1 280 aa11.08□□□□□ -0.64
LDHBP3-201ENST00000514909 NXF1Q9UBU9 619 aaKnown RBP11.08□□□□□ -0.64
LDHBP3-201ENST00000514909 IMPDH2P12268 514 aa11.07□□□□□ -0.64
LDHBP3-201ENST00000514909 CD33P20138 364 aa11.07□□□□□ -0.64
LDHBP3-201ENST00000514909 NME2P22392 152 aa11.07□□□□□ -0.64
LDHBP3-201ENST00000514909 LORP23490 312 aaPredicted RBP11.07□□□□□ -0.64
LDHBP3-201ENST00000514909 ZNF165P49910 485 aa11.07□□□□□ -0.64
LDHBP3-201ENST00000514909 PTPROQ16827 1216 aa11.07□□□□□ -0.64
LDHBP3-201ENST00000514909 RNF187Q5TA31 235 aaPredicted RBP11.07□□□□□ -0.64
LDHBP3-201ENST00000514909 BSNDQ8WZ55 320 aa11.07□□□□□ -0.64
LDHBP3-201ENST00000514909 PPT2Q9UMR5 302 aa11.07□□□□□ -0.64
LDHBP3-201ENST00000514909 ZBTB42B2RXF5 422 aa11.06□□□□□ -0.64
LDHBP3-201ENST00000514909 CILPO75339 1184 aa11.06□□□□□ -0.64
LDHBP3-201ENST00000514909 B3GALT4O96024 378 aa11.06□□□□□ -0.64
LDHBP3-201ENST00000514909 BMP6P22004 513 aa11.06□□□□□ -0.64
LDHBP3-201ENST00000514909 LRRC14Q15048 493 aa11.06□□□□□ -0.64
LDHBP3-201ENST00000514909 GPATCH3Q96I76 525 aa11.06□□□□□ -0.64
LDHBP3-201ENST00000514909 MUC3BQ9H195 1237 aa11.06□□□□□ -0.64
LDHBP3-201ENST00000514909 RBSNQ9H1K0 784 aa11.06□□□□□ -0.64
LDHBP3-201ENST00000514909 PHF24Q9UPV7 400 aa11.06□□□□□ -0.64
LDHBP3-201ENST00000514909 GHRHP01286 108 aa11.05□□□□□ -0.64
LDHBP3-201ENST00000514909 CCDC81Q6ZN84 652 aa11.05□□□□□ -0.64
LDHBP3-201ENST00000514909 REC114Q7Z4M0 266 aa11.05□□□□□ -0.64
LDHBP3-201ENST00000514909 RAB44Q7Z6P3 723 aaPredicted RBP11.05□□□□□ -0.64
LDHBP3-201ENST00000514909 RBBP8NLQ8NC74 664 aaPredicted RBP11.05□□□□□ -0.64
LDHBP3-201ENST00000514909 ZNRF3Q9ULT6 936 aa11.05□□□□□ -0.64
LDHBP3-201ENST00000514909 PCDHB5Q9Y5E4 795 aa11.05□□□□□ -0.64
LDHBP3-201ENST00000514909 FAM221BA6H8Z2 402 aa11.04□□□□□ -0.64
LDHBP3-201ENST00000514909 SMNDC1O75940 238 aaKnown RBP eCLIP11.04□□□□□ -0.64
LDHBP3-201ENST00000514909 FGFR3P22607 806 aa11.04□□□□□ -0.64
LDHBP3-201ENST00000514909 ATP11AP98196 1134 aa11.04□□□□□ -0.64
LDHBP3-201ENST00000514909 FAM169BQ8N8A8 192 aa11.04□□□□□ -0.64
LDHBP3-201ENST00000514909 FBXO27Q8NI29 283 aa11.04□□□□□ -0.64
LDHBP3-201ENST00000514909 ZCRB1Q8TBF4 217 aaKnown RBP11.04□□□□□ -0.64
LDHBP3-201ENST00000514909 ZNF837Q96EG3 531 aaPredicted RBP11.04□□□□□ -0.64
LDHBP3-201ENST00000514909 FERD3LQ96RJ6 166 aa11.04□□□□□ -0.64
LDHBP3-201ENST00000514909 CRBNQ96SW2 442 aa11.04□□□□□ -0.64
LDHBP3-201ENST00000514909 POP1Q99575 1024 aaKnown RBP11.04□□□□□ -0.64
LDHBP3-201ENST00000514909 ACTR10Q9NZ32 417 aa11.04□□□□□ -0.64
LDHBP3-201ENST00000514909 TLR3O15455 904 aaKnown RBP11.03□□□□□ -0.64
LDHBP3-201ENST00000514909 GMPRP36959 345 aa11.03□□□□□ -0.64
LDHBP3-201ENST00000514909 PCDH1Q08174 1060 aa11.03□□□□□ -0.64
LDHBP3-201ENST00000514909 DDR2Q16832 855 aa11.03□□□□□ -0.64
LDHBP3-201ENST00000514909 NPAS3Q8IXF0 933 aa11.03□□□□□ -0.64
LDHBP3-201ENST00000514909 CCDC155Q8N6L0 562 aa11.03□□□□□ -0.64
LDHBP3-201ENST00000514909 EMILIN2Q9BXX0 1053 aa11.03□□□□□ -0.64
LDHBP3-201ENST00000514909 SOX13Q9UN79 622 aa11.03□□□□□ -0.64
LDHBP3-201ENST00000514909 J3QW42 95 aa11.02□□□□□ -0.65
LDHBP3-201ENST00000514909 RASGRF1Q13972 1273 aa11.02□□□□□ -0.65
LDHBP3-201ENST00000514909 RASIP1Q5U651 963 aa11.02□□□□□ -0.65
LDHBP3-201ENST00000514909 CELF2-AS1Q8N7Q2 184 aa11.02□□□□□ -0.65
LDHBP3-201ENST00000514909 SLC16A10Q8TF71 515 aa11.02□□□□□ -0.65
LDHBP3-201ENST00000514909 PRKAB1Q9Y478 270 aa11.02□□□□□ -0.65
LDHBP3-201ENST00000514909 H3BM21 787 aa11.01□□□□□ -0.65
LDHBP3-201ENST00000514909 IBSPP21815 317 aaPredicted RBP11.01□□□□□ -0.65
LDHBP3-201ENST00000514909 CASP7P55210 303 aa11.01□□□□□ -0.65
LDHBP3-201ENST00000514909 LLGL2Q6P1M3 1020 aa11.01□□□□□ -0.65
LDHBP3-201ENST00000514909 SULF2Q8IWU5 870 aa11.01□□□□□ -0.65
LDHBP3-201ENST00000514909 GAL3ST3Q96A11 431 aa11.01□□□□□ -0.65
LDHBP3-201ENST00000514909 ADAM19Q9H013 955 aa11.01□□□□□ -0.65
LDHBP3-201ENST00000514909 DNAJB12Q9NXW2 375 aaKnown RBP11.01□□□□□ -0.65
LDHBP3-201ENST00000514909 hCG_2014768A0A024R1R8 64 aa11□□□□□ -0.65
LDHBP3-201ENST00000514909 SIN3BO75182 1162 aa11□□□□□ -0.65
LDHBP3-201ENST00000514909 BPNT1O95861 308 aa11□□□□□ -0.65
LDHBP3-201ENST00000514909 PTPRAP18433 802 aa11□□□□□ -0.65
LDHBP3-201ENST00000514909 ARNTP27540 789 aa11□□□□□ -0.65
LDHBP3-201ENST00000514909 MCM4P33991 863 aa11□□□□□ -0.65
LDHBP3-201ENST00000514909 IGBP1P78318 339 aa11□□□□□ -0.65
LDHBP3-201ENST00000514909 MLLT1Q03111 559 aaPredicted RBP11□□□□□ -0.65
LDHBP3-201ENST00000514909 SEPT6Q14141 434 aa11□□□□□ -0.65
LDHBP3-201ENST00000514909 SH3TC2Q8TF17 1288 aa11□□□□□ -0.65
LDHBP3-201ENST00000514909 JARID2Q92833 1246 aaPredicted RBP11□□□□□ -0.65
LDHBP3-201ENST00000514909 PLD4Q96BZ4 506 aa11□□□□□ -0.65
LDHBP3-201ENST00000514909 EHMT1Q9H9B1 1298 aa11□□□□□ -0.65
LDHBP3-201ENST00000514909 BRMS1Q9HCU9 246 aa11□□□□□ -0.65
LDHBP3-201ENST00000514909 ERBB4Q15303 1308 aa11□□□□□ -0.65
LDHBP3-201ENST00000514909 EIF2AK2P19525 551 aaKnown RBP10.99□□□□□ -0.65
LDHBP3-201ENST00000514909 ZNF252P-AS1Q0IIN9 211 aa10.99□□□□□ -0.65
LDHBP3-201ENST00000514909 IFRD2Q12894 506 aaPredicted RBP10.99□□□□□ -0.65
LDHBP3-201ENST00000514909 ZNF423Q2M1K9 1284 aa10.99□□□□□ -0.65
LDHBP3-201ENST00000514909 ZNF468Q5VIY5 522 aaPredicted RBP10.99□□□□□ -0.65
LDHBP3-201ENST00000514909 CEP135Q66GS9 1140 aa10.99□□□□□ -0.65
LDHBP3-201ENST00000514909 VN1R5Q7Z5H4 357 aa10.99□□□□□ -0.65
LDHBP3-201ENST00000514909 C19orf47Q8N9M1 422 aaKnown RBP10.99□□□□□ -0.65
LDHBP3-201ENST00000514909 AVENQ9NQS1 362 aaPredicted RBP10.99□□□□□ -0.65
LDHBP3-201ENST00000514909 NOP58Q9Y2X3 529 aaKnown RBP10.99□□□□□ -0.65
LDHBP3-201ENST00000514909 PDPK1O15530 556 aa10.98□□□□□ -0.65
LDHBP3-201ENST00000514909 CDC45O75419 566 aa10.98□□□□□ -0.65
LDHBP3-201ENST00000514909 ATE1O95260 518 aa10.98□□□□□ -0.65
LDHBP3-201ENST00000514909 ITGA6P23229 1130 aa10.98□□□□□ -0.65
LDHBP3-201ENST00000514909 RPL6Q02878 288 aaKnown RBP10.98□□□□□ -0.65
LDHBP3-201ENST00000514909 FXNQ16595 210 aa10.98□□□□□ -0.65
LDHBP3-201ENST00000514909 HFE2Q6ZVN8 426 aa10.98□□□□□ -0.65
LDHBP3-201ENST00000514909 LSRQ86X29 649 aaPredicted RBP10.98□□□□□ -0.65
LDHBP3-201ENST00000514909 IRF7Q92985 503 aa10.98□□□□□ -0.65
LDHBP3-201ENST00000514909 GTPBP3Q969Y2 492 aaKnown RBP10.98□□□□□ -0.65
LDHBP3-201ENST00000514909 UBE2OQ9C0C9 1292 aaKnown RBP10.98□□□□□ -0.65
LDHBP3-201ENST00000514909 MAPK8IP1Q9UQF2 711 aa10.98□□□□□ -0.65
LDHBP3-201ENST00000514909 ZNF157P51786 506 aaPredicted RBP10.97□□□□□ -0.65
LDHBP3-201ENST00000514909 CHMP4BP1P59074 171 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms