RNA–Protein interactions for RNA: ENST00000514831.1

SMAD1-214, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-214ENST00000514831 ARMC5Q96C12 935 aa28.88■■■□□ 2.21
SMAD1-214ENST00000514831 MS4A4AQ96JQ5 239 aa28.88■■■□□ 2.21
SMAD1-214ENST00000514831 EFCC1Q9HA90 598 aa28.88■■■□□ 2.21
SMAD1-214ENST00000514831 CRKP46108 304 aa28.87■■■□□ 2.21
SMAD1-214ENST00000514831 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.87■■■□□ 2.21
SMAD1-214ENST00000514831 KAZALD1Q96I82 304 aa28.87■■■□□ 2.21
SMAD1-214ENST00000514831 SUCLG2Q96I99 432 aa28.87■■■□□ 2.21
SMAD1-214ENST00000514831 PUS3Q9BZE2 481 aaKnown RBP28.87■■■□□ 2.21
SMAD1-214ENST00000514831 TNNI2P48788 182 aa28.86■■■□□ 2.21
SMAD1-214ENST00000514831 SLC4A10Q6U841 1118 aa28.86■■■□□ 2.21
SMAD1-214ENST00000514831 RIPOR2Q9Y4F9 1068 aa28.86■■■□□ 2.21
SMAD1-214ENST00000514831 MROH5Q6ZUA9 1318 aa28.86■■■□□ 2.21
SMAD1-214ENST00000514831 TCP10L2B9ZVM9 353 aa28.85■■■□□ 2.21
SMAD1-214ENST00000514831 CAP1Q01518 475 aa28.85■■■□□ 2.21
SMAD1-214ENST00000514831 VGLL4Q14135 290 aa28.85■■■□□ 2.21
SMAD1-214ENST00000514831 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.85■■■□□ 2.21
SMAD1-214ENST00000514831 TMEM39BQ9GZU3 492 aa28.85■■■□□ 2.21
SMAD1-214ENST00000514831 BRI3BPQ8WY22 251 aa28.84■■■□□ 2.21
SMAD1-214ENST00000514831 UTYO14607 1347 aa28.84■■■□□ 2.21
SMAD1-214ENST00000514831 HDLBPQ00341 1268 aaKnown RBP28.83■■■□□ 2.21
SMAD1-214ENST00000514831 CNKSR2Q8WXI2 1034 aa28.83■■■□□ 2.21
SMAD1-214ENST00000514831 CENPFP49454 3210 aa28.82■■■□□ 2.2
SMAD1-214ENST00000514831 NBPF7P0C2Y1 421 aaPredicted RBP28.82■■■□□ 2.2
SMAD1-214ENST00000514831 GTF2A2P52657 109 aa28.82■■■□□ 2.2
SMAD1-214ENST00000514831 MAP3K9P80192 1104 aa28.82■■■□□ 2.2
SMAD1-214ENST00000514831 RABL6Q3YEC7 729 aaPredicted RBP28.82■■■□□ 2.2
SMAD1-214ENST00000514831 FBXO33Q7Z6M2 555 aa28.82■■■□□ 2.2
SMAD1-214ENST00000514831 CSADQ9Y600 493 aa28.82■■■□□ 2.2
SMAD1-214ENST00000514831 MKI67P46013 3256 aaKnown RBP28.81■■■□□ 2.2
SMAD1-214ENST00000514831 CCL15-CCL14A0A0B4J2E2 113 aa28.81■■■□□ 2.2
SMAD1-214ENST00000514831 TAF1CQ15572 869 aaPredicted RBP28.81■■■□□ 2.2
SMAD1-214ENST00000514831 GRIK5Q16478 980 aa28.81■■■□□ 2.2
SMAD1-214ENST00000514831 CCL15Q16663 113 aa28.81■■■□□ 2.2
SMAD1-214ENST00000514831 VPS37DQ86XT2 251 aa28.81■■■□□ 2.2
SMAD1-214ENST00000514831 TBC1D22AQ8WUA7 517 aa28.81■■■□□ 2.2
SMAD1-214ENST00000514831 BICC1Q9H694 974 aaKnown RBP28.8■■■□□ 2.2
SMAD1-214ENST00000514831 ZFYVE28Q9HCC9 887 aa28.8■■■□□ 2.2
SMAD1-214ENST00000514831 IQSEC3Q9UPP2 1182 aaPredicted RBP28.8■■■□□ 2.2
SMAD1-214ENST00000514831 MYH13Q9UKX3 1938 aa28.8■■■□□ 2.2
SMAD1-214ENST00000514831 TEKT1Q969V4 418 aa28.79■■■□□ 2.2
SMAD1-214ENST00000514831 OTUD5Q96G74 571 aa28.79■■■□□ 2.2
SMAD1-214ENST00000514831 SPDYE5A6NIY4 337 aa28.78■■■□□ 2.2
SMAD1-214ENST00000514831 CHAF1AQ13111 956 aaPredicted RBP28.78■■■□□ 2.2
SMAD1-214ENST00000514831 ARHGEF6Q15052 776 aa28.78■■■□□ 2.2
SMAD1-214ENST00000514831 CAVIN4Q5BKX8 364 aa28.78■■■□□ 2.2
SMAD1-214ENST00000514831 FAM43AQ8N2R8 423 aa28.78■■■□□ 2.2
SMAD1-214ENST00000514831 VGLL2Q8N8G2 317 aa28.78■■■□□ 2.2
SMAD1-214ENST00000514831 ZNF333Q96JL9 665 aa28.78■■■□□ 2.2
SMAD1-214ENST00000514831 BRCA2P51587 3418 aa28.78■■■□□ 2.2
SMAD1-214ENST00000514831 LRRC24Q50LG9 513 aa28.77■■■□□ 2.2
SMAD1-214ENST00000514831 METTL24Q5JXM2 366 aa28.77■■■□□ 2.2
SMAD1-214ENST00000514831 RPAP1Q9BWH6 1393 aaPredicted RBP28.76■■■□□ 2.2
SMAD1-214ENST00000514831 ZSWIM8A7E2V4 1837 aa28.76■■■□□ 2.19
SMAD1-214ENST00000514831 ANP32CO43423 234 aa28.76■■■□□ 2.19
SMAD1-214ENST00000514831 EN2P19622 333 aaPredicted RBP28.76■■■□□ 2.19
SMAD1-214ENST00000514831 ANKRD44Q8N8A2 993 aa28.76■■■□□ 2.19
SMAD1-214ENST00000514831 ZDHHC15Q96MV8 337 aa28.76■■■□□ 2.19
SMAD1-214ENST00000514831 SNCAIPQ9Y6H5 919 aa28.76■■■□□ 2.19
SMAD1-214ENST00000514831 MAST3O60307 1309 aa28.75■■■□□ 2.19
SMAD1-214ENST00000514831 FRAT2O75474 233 aaPredicted RBP28.75■■■□□ 2.19
SMAD1-214ENST00000514831 PDE8BO95263 885 aa28.75■■■□□ 2.19
SMAD1-214ENST00000514831 CACNB3P54284 484 aa28.75■■■□□ 2.19
SMAD1-214ENST00000514831 FAM83AQ86UY5 434 aa28.75■■■□□ 2.19
SMAD1-214ENST00000514831 MRIQ9BWK5 157 aa28.75■■■□□ 2.19
SMAD1-214ENST00000514831 ZCCHC17Q9NP64 241 aaKnown RBP28.75■■■□□ 2.19
SMAD1-214ENST00000514831 TMOD2Q9NZR1 351 aa28.75■■■□□ 2.19
SMAD1-214ENST00000514831 PTCH2Q9Y6C5 1203 aa28.75■■■□□ 2.19
SMAD1-214ENST00000514831 KIF16BQ96L93 1317 aa28.74■■■□□ 2.19
SMAD1-214ENST00000514831 SLC9C1Q4G0N8 1177 aa28.74■■■□□ 2.19
SMAD1-214ENST00000514831 HABP4Q5JVS0 413 aaKnown RBP28.74■■■□□ 2.19
SMAD1-214ENST00000514831 FKBP1CQ5VVH2 108 aa28.74■■■□□ 2.19
SMAD1-214ENST00000514831 HOOK2Q96ED9 719 aa28.74■■■□□ 2.19
SMAD1-214ENST00000514831 TMEM106CQ9BVX2 250 aa28.74■■■□□ 2.19
SMAD1-214ENST00000514831 SUGT1Q9Y2Z0 365 aa28.74■■■□□ 2.19
SMAD1-214ENST00000514831 ERO1BQ86YB8 467 aa28.73■■■□□ 2.19
SMAD1-214ENST00000514831 WRNIP1Q96S55 665 aa28.73■■■□□ 2.19
SMAD1-214ENST00000514831 WDHD1O75717 1129 aaPredicted RBP28.72■■■□□ 2.19
SMAD1-214ENST00000514831 CETPP11597 493 aa28.72■■■□□ 2.19
SMAD1-214ENST00000514831 NBPF11Q86T75 865 aa28.72■■■□□ 2.19
SMAD1-214ENST00000514831 TLR2O60603 784 aa28.71■■■□□ 2.19
SMAD1-214ENST00000514831 BCAMP50895 628 aa28.71■■■□□ 2.19
SMAD1-214ENST00000514831 APOBEC3HQ6NTF7 200 aaKnown RBP28.71■■■□□ 2.19
SMAD1-214ENST00000514831 PPIL2Q13356 520 aa28.7■■■□□ 2.18
SMAD1-214ENST00000514831 PTPRCP08575 1304 aa28.69■■■□□ 2.18
SMAD1-214ENST00000514831 ZNF521Q96K83 1311 aa28.69■■■□□ 2.18
SMAD1-214ENST00000514831 BTBD19C9JJ37 291 aa28.69■■■□□ 2.18
SMAD1-214ENST00000514831 IRF6O14896 467 aa28.69■■■□□ 2.18
SMAD1-214ENST00000514831 SNAPC2Q13487 334 aa28.69■■■□□ 2.18
SMAD1-214ENST00000514831 PUM3Q15397 648 aaKnown RBP28.69■■■□□ 2.18
SMAD1-214ENST00000514831 DCAF15Q66K64 600 aa28.69■■■□□ 2.18
SMAD1-214ENST00000514831 HHIPL2Q6UWX4 724 aa28.69■■■□□ 2.18
SMAD1-214ENST00000514831 KLHDC4Q8TBB5 520 aa28.69■■■□□ 2.18
SMAD1-214ENST00000514831 ZKSCAN4Q969J2 545 aaPredicted RBP28.69■■■□□ 2.18
SMAD1-214ENST00000514831 FGFR2P21802 821 aa28.68■■■□□ 2.18
SMAD1-214ENST00000514831 LACTBP83111 547 aaPredicted RBP28.68■■■□□ 2.18
SMAD1-214ENST00000514831 MRPL50Q8N5N7 158 aaKnown RBP28.68■■■□□ 2.18
SMAD1-214ENST00000514831 IFIT1P09914 478 aaKnown RBP28.67■■■□□ 2.18
SMAD1-214ENST00000514831 GNRH1P01148 92 aa28.66■■■□□ 2.18
SMAD1-214ENST00000514831 KIF22Q14807 665 aa28.66■■■□□ 2.18
SMAD1-214ENST00000514831 FAM9BQ8IZU0 186 aa28.66■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms