RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 LARP6Q9BRS8 491 aaKnown RBP8.65□□□□□ -1.03
PDLIM5-219ENST00000514743 SIL1Q9H173 461 aa8.65□□□□□ -1.03
PDLIM5-219ENST00000514743 WNK3Q9BYP7 1800 aa8.65□□□□□ -1.03
PDLIM5-219ENST00000514743 WDR17Q8IZU2 1322 aa8.64□□□□□ -1.03
PDLIM5-219ENST00000514743 RBM47A0AV96 593 aaKnown RBP8.64□□□□□ -1.03
PDLIM5-219ENST00000514743 EIF3JO75822 258 aaKnown RBP8.64□□□□□ -1.03
PDLIM5-219ENST00000514743 PTPN12Q05209 780 aaKnown RBP8.64□□□□□ -1.03
PDLIM5-219ENST00000514743 FAXDC2Q96IV6 333 aa8.64□□□□□ -1.03
PDLIM5-219ENST00000514743 FAM227BQ96M60 508 aa8.64□□□□□ -1.03
PDLIM5-219ENST00000514743 PICK1Q9NRD5 415 aa8.64□□□□□ -1.03
PDLIM5-219ENST00000514743 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.64□□□□□ -1.03
PDLIM5-219ENST00000514743 CCDC171Q6TFL3 1326 aa8.64□□□□□ -1.03
PDLIM5-219ENST00000514743 NBPF26B4DH59 902 aa8.64□□□□□ -1.03
PDLIM5-219ENST00000514743 ST3GAL1Q11201 340 aa8.64□□□□□ -1.03
PDLIM5-219ENST00000514743 NBPF14Q5TI25 921 aa8.64□□□□□ -1.03
PDLIM5-219ENST00000514743 TTC5Q8N0Z6 440 aa8.64□□□□□ -1.03
PDLIM5-219ENST00000514743 NBPF15Q8N660 670 aa8.64□□□□□ -1.03
PDLIM5-219ENST00000514743 PHC3Q8NDX5 983 aa8.64□□□□□ -1.03
PDLIM5-219ENST00000514743 ZC3H15Q8WU90 426 aaKnown RBP8.64□□□□□ -1.03
PDLIM5-219ENST00000514743 CCDC34Q96HJ3 373 aa8.64□□□□□ -1.03
PDLIM5-219ENST00000514743 COPRSQ9NQ92 184 aa8.64□□□□□ -1.03
PDLIM5-219ENST00000514743 ST7Q9NRC1 585 aa8.64□□□□□ -1.03
PDLIM5-219ENST00000514743 TMEM63CQ9P1W3 806 aa8.64□□□□□ -1.03
PDLIM5-219ENST00000514743 SOS2Q07890 1332 aaPredicted RBP8.64□□□□□ -1.03
PDLIM5-219ENST00000514743 MYBL2P10244 700 aa8.64□□□□□ -1.03
PDLIM5-219ENST00000514743 NCBP1Q09161 790 aaKnown RBP8.64□□□□□ -1.03
PDLIM5-219ENST00000514743 G3BP1Q13283 466 aaKnown RBP eCLIP8.64□□□□□ -1.038e-6■□□□□ 9
PDLIM5-219ENST00000514743 NMIQ13287 307 aaPredicted RBP8.64□□□□□ -1.03
PDLIM5-219ENST00000514743 MYLK4Q86YV6 388 aaPredicted RBP8.64□□□□□ -1.03
PDLIM5-219ENST00000514743 FMNL3Q8IVF7 1028 aa8.64□□□□□ -1.03
PDLIM5-219ENST00000514743 GIMAP7Q8NHV1 300 aa8.64□□□□□ -1.03
PDLIM5-219ENST00000514743 GPATCH3Q96I76 525 aa8.64□□□□□ -1.03
PDLIM5-219ENST00000514743 ANKRD36CQ5JPF3 1778 aa8.63□□□□□ -1.03
PDLIM5-219ENST00000514743 MYH15Q9Y2K3 1946 aa8.63□□□□□ -1.03
PDLIM5-219ENST00000514743 A0A0D9SFI3 127 aa8.63□□□□□ -1.03
PDLIM5-219ENST00000514743 CCDC26Q8TAB7 109 aa8.63□□□□□ -1.03
PDLIM5-219ENST00000514743 SH3GL3Q99963 347 aa8.63□□□□□ -1.03
PDLIM5-219ENST00000514743 TSPYL2Q9H2G4 693 aaPredicted RBP8.63□□□□□ -1.03
PDLIM5-219ENST00000514743 VEZTQ9HBM0 779 aa8.63□□□□□ -1.03
PDLIM5-219ENST00000514743 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.63□□□□□ -1.032e-8■■■■□ 25.8
PDLIM5-219ENST00000514743 ERCC3P19447 782 aa8.63□□□□□ -1.03
PDLIM5-219ENST00000514743 CASTP20810 708 aaKnown RBP8.63□□□□□ -1.03
PDLIM5-219ENST00000514743 MAGEA9P43362 315 aa8.63□□□□□ -1.03
PDLIM5-219ENST00000514743 RWDD2BP57060 319 aa8.63□□□□□ -1.03
PDLIM5-219ENST00000514743 CABP4P57796 275 aa8.63□□□□□ -1.03
PDLIM5-219ENST00000514743 MMS22LQ6ZRQ5 1243 aa8.63□□□□□ -1.03
PDLIM5-219ENST00000514743 MAP4K1Q92918 833 aa8.63□□□□□ -1.03
PDLIM5-219ENST00000514743 GDPD2Q9HCC8 539 aa8.63□□□□□ -1.03
PDLIM5-219ENST00000514743 ZSWIM6Q9HCJ5 1215 aa8.63□□□□□ -1.03
PDLIM5-219ENST00000514743 PCDH11XQ9BZA7 1347 aa8.63□□□□□ -1.03
PDLIM5-219ENST00000514743 PCDH11YQ9BZA8 1340 aa8.63□□□□□ -1.03
PDLIM5-219ENST00000514743 PRIM1P49642 420 aaKnown RBP8.62□□□□□ -1.03
PDLIM5-219ENST00000514743 CCDC15Q0P6D6 951 aa8.62□□□□□ -1.03
PDLIM5-219ENST00000514743 TEX35Q5T0J7 233 aa8.62□□□□□ -1.03
PDLIM5-219ENST00000514743 PRPF40BQ6NWY9 871 aaKnown RBP8.62□□□□□ -1.03
PDLIM5-219ENST00000514743 RNF214Q8ND24 703 aa8.62□□□□□ -1.03
PDLIM5-219ENST00000514743 RUFY2Q8WXA3 655 aa8.62□□□□□ -1.03
PDLIM5-219ENST00000514743 RBSNQ9H1K0 784 aa8.62□□□□□ -1.03
PDLIM5-219ENST00000514743 DBNLQ9UJU6 430 aaKnown RBP8.62□□□□□ -1.03
PDLIM5-219ENST00000514743 PCDHGA4Q9Y5G9 962 aa8.62□□□□□ -1.03
PDLIM5-219ENST00000514743 PLCH1Q4KWH8 1693 aa8.62□□□□□ -1.03
PDLIM5-219ENST00000514743 SPEF2Q9C093 1822 aa8.62□□□□□ -1.03
PDLIM5-219ENST00000514743 ATP5J2-PTCD1G3V325 749 aa8.62□□□□□ -1.03
PDLIM5-219ENST00000514743 CTIFO43310 598 aaKnown RBP8.62□□□□□ -1.03
PDLIM5-219ENST00000514743 PTCD1O75127 700 aaKnown RBP8.62□□□□□ -1.03
PDLIM5-219ENST00000514743 PUS10Q3MIT2 529 aaKnown RBP8.62□□□□□ -1.03
PDLIM5-219ENST00000514743 UBE3BQ7Z3V4 1068 aa8.62□□□□□ -1.03
PDLIM5-219ENST00000514743 DZIP3Q86Y13 1208 aaKnown RBP8.62□□□□□ -1.03
PDLIM5-219ENST00000514743 PLBD2Q8NHP8 589 aa8.62□□□□□ -1.03
PDLIM5-219ENST00000514743 PIBF1Q8WXW3 757 aa8.62□□□□□ -1.03
PDLIM5-219ENST00000514743 LZTS2Q9BRK4 669 aa8.62□□□□□ -1.03
PDLIM5-219ENST00000514743 TM6SF1Q9BZW5 370 aa8.62□□□□□ -1.03
PDLIM5-219ENST00000514743 BOLA2Q9H3K6 86 aa8.62□□□□□ -1.03
PDLIM5-219ENST00000514743 DDX60Q8IY21 1712 aaKnown RBP8.62□□□□□ -1.03
PDLIM5-219ENST00000514743 SYCE3A1L190 88 aa8.62□□□□□ -1.03
PDLIM5-219ENST00000514743 AP1G2O75843 785 aa8.62□□□□□ -1.03
PDLIM5-219ENST00000514743 MIEF2Q96C03 454 aa8.62□□□□□ -1.03
PDLIM5-219ENST00000514743 PNMA2Q9UL42 364 aa8.62□□□□□ -1.03
PDLIM5-219ENST00000514743 LIMCH1Q9UPQ0 1083 aa8.62□□□□□ -1.03
PDLIM5-219ENST00000514743 RBM8AQ9Y5S9 174 aaKnown RBP8.62□□□□□ -1.03
PDLIM5-219ENST00000514743 TAF6LQ9Y6J9 622 aa8.62□□□□□ -1.03
PDLIM5-219ENST00000514743 MARCH6O60337 910 aa8.61□□□□□ -1.03
PDLIM5-219ENST00000514743 FOXO4P98177 505 aa8.61□□□□□ -1.03
PDLIM5-219ENST00000514743 INF2Q27J81 1249 aa8.61□□□□□ -1.03
PDLIM5-219ENST00000514743 TNNI3KQ59H18 835 aa8.61□□□□□ -1.03
PDLIM5-219ENST00000514743 VPS53Q5VIR6 699 aa8.61□□□□□ -1.03
PDLIM5-219ENST00000514743 C16orf87Q6PH81 154 aa8.61□□□□□ -1.03
PDLIM5-219ENST00000514743 ZNF589Q86UQ0 364 aaPredicted RBP8.61□□□□□ -1.03
PDLIM5-219ENST00000514743 EDC3Q96F86 508 aaKnown RBP8.61□□□□□ -1.03
PDLIM5-219ENST00000514743 CEP126Q9P2H0 1117 aa8.61□□□□□ -1.03
PDLIM5-219ENST00000514743 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.61□□□□□ -1.03
PDLIM5-219ENST00000514743 FPGT-TNNI3KV9GXZ4 949 aa8.61□□□□□ -1.03
PDLIM5-219ENST00000514743 MYH3P11055 1940 aa8.61□□□□□ -1.03
PDLIM5-219ENST00000514743 MYH7P12883 1935 aa8.61□□□□□ -1.03
PDLIM5-219ENST00000514743 TFCP2Q12800 502 aa8.61□□□□□ -1.03
PDLIM5-219ENST00000514743 CREB3L3Q68CJ9 461 aa8.61□□□□□ -1.03
PDLIM5-219ENST00000514743 JAKMIP1Q96N16 626 aaKnown RBP8.61□□□□□ -1.03
PDLIM5-219ENST00000514743 SUN2Q9UH99 717 aa8.61□□□□□ -1.03
PDLIM5-219ENST00000514743 ZNF609O15014 1411 aa8.61□□□□□ -1.03
PDLIM5-219ENST00000514743 NWD2Q9ULI1 1742 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms