RNA–Protein interactions for RNA: ENST00000514621.5

HIPK1-210, Transcript of homeodomain interacting protein kinase 1, human

TSL 4

Gene HIPK1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HIPK1-210	ENST00000514621	TREML1	Q86YW5	311 aa		9.22	□□□□□ -0.93
HIPK1-210	ENST00000514621	GSX2	Q9BZM3	304 aa		9.22	□□□□□ -0.93
HIPK1-210	ENST00000514621	SAP130	Q9H0E3	1048 aa		9.22	□□□□□ -0.93
HIPK1-210	ENST00000514621	GPRASP1	Q5JY77	1395 aa		9.22	□□□□□ -0.93
HIPK1-210	ENST00000514621	DCC	P43146	1447 aa		9.22	□□□□□ -0.93
HIPK1-210	ENST00000514621	RALGAPB	Q86X10	1494 aa		9.21	□□□□□ -0.93
HIPK1-210	ENST00000514621	NAA30	Q147X3	362 aa	Predicted RBP	9.21	□□□□□ -0.94
HIPK1-210	ENST00000514621	CARD11	Q9BXL7	1154 aa		9.21	□□□□□ -0.94
HIPK1-210	ENST00000514621	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	9.21	□□□□□ -0.94
HIPK1-210	ENST00000514621	NALCN	Q8IZF0	1738 aa		9.21	□□□□□ -0.94
HIPK1-210	ENST00000514621	TMEM88B	A6NKF7	163 aa		9.2	□□□□□ -0.94
HIPK1-210	ENST00000514621	GRN	P28799	593 aa	Known RBP	9.2	□□□□□ -0.94
HIPK1-210	ENST00000514621	ADH7	P40394	386 aa		9.2	□□□□□ -0.94
HIPK1-210	ENST00000514621	CAPN12	Q6ZSI9	719 aa		9.2	□□□□□ -0.94
HIPK1-210	ENST00000514621	TRIM11	Q96F44	468 aa		9.2	□□□□□ -0.94
HIPK1-210	ENST00000514621	HIRIP3	Q9BW71	556 aa	Predicted RBP	9.2	□□□□□ -0.94
HIPK1-210	ENST00000514621	STARD13	Q9Y3M8	1113 aa		9.2	□□□□□ -0.94
HIPK1-210	ENST00000514621	MST1R	Q04912	1400 aa		9.2	□□□□□ -0.94
HIPK1-210	ENST00000514621	OPLAH	O14841	1288 aa		9.19	□□□□□ -0.94
HIPK1-210	ENST00000514621	SPOCK3	Q9BQ16	436 aa		9.19	□□□□□ -0.94
HIPK1-210	ENST00000514621	NOP53	Q9NZM5	478 aa	Known RBP	9.19	□□□□□ -0.94
HIPK1-210	ENST00000514621	CENPJ	Q9HC77	1338 aa	Predicted RBP	9.19	□□□□□ -0.94
HIPK1-210	ENST00000514621	ARHGEF28	Q8N1W1	1705 aa	Known RBP	9.19	□□□□□ -0.94
HIPK1-210	ENST00000514621	PROC	P04070	461 aa		9.18	□□□□□ -0.94
HIPK1-210	ENST00000514621	HSPA1L	P34931	641 aa		9.18	□□□□□ -0.94
HIPK1-210	ENST00000514621	CDC42BPG	Q6DT37	1551 aa		9.18	□□□□□ -0.94
HIPK1-210	ENST00000514621	BRINP3	Q76B58	766 aa		9.18	□□□□□ -0.94
HIPK1-210	ENST00000514621	ARID3A	Q99856	593 aa		9.18	□□□□□ -0.94
HIPK1-210	ENST00000514621	UBE2O	Q9C0C9	1292 aa	Known RBP	9.18	□□□□□ -0.94
HIPK1-210	ENST00000514621	RTCB	Q9Y3I0	505 aa	Known RBP	9.18	□□□□□ -0.94
HIPK1-210	ENST00000514621	C1orf167	Q5SNV9	1468 aa		9.17	□□□□□ -0.94
HIPK1-210	ENST00000514621	MSTN	O14793	375 aa		9.17	□□□□□ -0.94
HIPK1-210	ENST00000514621	ALB	P02768	609 aa		9.17	□□□□□ -0.94
HIPK1-210	ENST00000514621	NFKB1	P19838	968 aa		9.17	□□□□□ -0.94
HIPK1-210	ENST00000514621	ETFBKMT	Q8IXQ9	262 aa		9.17	□□□□□ -0.94
HIPK1-210	ENST00000514621	RGL4	Q8IZJ4	473 aa		9.17	□□□□□ -0.94
HIPK1-210	ENST00000514621	ORAI2	Q96SN7	254 aa		9.17	□□□□□ -0.94
HIPK1-210	ENST00000514621	IGFLR1	Q9H665	355 aa		9.17	□□□□□ -0.94
HIPK1-210	ENST00000514621	FAM13B	Q9NYF5	915 aa		9.17	□□□□□ -0.94
HIPK1-210	ENST00000514621	STIM2	Q9P246	746 aa		9.17	□□□□□ -0.94
HIPK1-210	ENST00000514621	ADGRB2	O60241	1585 aa		9.16	□□□□□ -0.94
HIPK1-210	ENST00000514621	EIF3A	Q14152	1382 aa	Known RBP	9.16	□□□□□ -0.94
HIPK1-210	ENST00000514621		M0R082	166 aa		9.16	□□□□□ -0.94
HIPK1-210	ENST00000514621	TNFRSF10B	O14763	440 aa		9.16	□□□□□ -0.94
HIPK1-210	ENST00000514621	MAP3K6	O95382	1288 aa		9.16	□□□□□ -0.94
HIPK1-210	ENST00000514621	SSFA2	P28290	1259 aa		9.16	□□□□□ -0.94
HIPK1-210	ENST00000514621	TBC1D8B	Q0IIM8	1120 aa		9.16	□□□□□ -0.94
HIPK1-210	ENST00000514621	PCSK7	Q16549	785 aa		9.16	□□□□□ -0.94
HIPK1-210	ENST00000514621	CMTR1	Q8N1G2	835 aa	Known RBP	9.16	□□□□□ -0.94
HIPK1-210	ENST00000514621	ABTB2	Q8N961	1025 aa		9.16	□□□□□ -0.94
HIPK1-210	ENST00000514621	ZNF417	Q8TAU3	575 aa		9.16	□□□□□ -0.94
HIPK1-210	ENST00000514621	ZNF587	Q96SQ5	575 aa	Predicted RBP	9.16	□□□□□ -0.94
HIPK1-210	ENST00000514621	CDK19	Q9BWU1	502 aa		9.16	□□□□□ -0.94
HIPK1-210	ENST00000514621	PRDM6	Q9NQX0	595 aa		9.16	□□□□□ -0.94
HIPK1-210	ENST00000514621	ROBO1	Q9Y6N7	1651 aa		9.16	□□□□□ -0.94
HIPK1-210	ENST00000514621	EGFR	P00533	1210 aa		9.15	□□□□□ -0.94
HIPK1-210	ENST00000514621	COL9A3	Q14050	684 aa	Predicted RBP	9.15	□□□□□ -0.94
HIPK1-210	ENST00000514621	PLVAP	Q9BX97	442 aa		9.15	□□□□□ -0.94
HIPK1-210	ENST00000514621	SEPT3	Q9UH03	358 aa		9.15	□□□□□ -0.94
HIPK1-210	ENST00000514621	UST	Q9Y2C2	406 aa		9.15	□□□□□ -0.94
HIPK1-210	ENST00000514621	FMN2	Q9NZ56	1722 aa		9.14	□□□□□ -0.95
HIPK1-210	ENST00000514621	PRR36	Q9H6K5	1346 aa		9.14	□□□□□ -0.95
HIPK1-210	ENST00000514621	ST20-MTHFS	A0A0A6YYL1	179 aa		9.14	□□□□□ -0.95
HIPK1-210	ENST00000514621	XYLB	O75191	536 aa		9.14	□□□□□ -0.95
HIPK1-210	ENST00000514621	RARA	P10276	462 aa		9.14	□□□□□ -0.95
HIPK1-210	ENST00000514621	ARID4A	P29374	1257 aa	Predicted RBP	9.14	□□□□□ -0.95
HIPK1-210	ENST00000514621	KRT25	Q7Z3Z0	450 aa		9.14	□□□□□ -0.95
HIPK1-210	ENST00000514621	MICALL1	Q8N3F8	863 aa		9.14	□□□□□ -0.95
HIPK1-210	ENST00000514621	DDX17	Q92841	729 aa	Known RBP	9.14	□□□□□ -0.95
HIPK1-210	ENST00000514621	DNAJB12	Q9NXW2	375 aa	Known RBP	9.14	□□□□□ -0.95
HIPK1-210	ENST00000514621	SLC6A14	Q9UN76	642 aa		9.14	□□□□□ -0.95
HIPK1-210	ENST00000514621	USP20	Q9Y2K6	914 aa		9.14	□□□□□ -0.95
HIPK1-210	ENST00000514621	ANKAR	Q7Z5J8	1434 aa		9.14	□□□□□ -0.95
HIPK1-210	ENST00000514621	USP47	Q96K76	1375 aa		9.13	□□□□□ -0.95
HIPK1-210	ENST00000514621	SASH3	O75995	380 aa		9.13	□□□□□ -0.95
HIPK1-210	ENST00000514621	TARS	P26639	723 aa	Known RBP	9.13	□□□□□ -0.95
HIPK1-210	ENST00000514621	C20orf204	Q6ZNR8	217 aa		9.13	□□□□□ -0.95
HIPK1-210	ENST00000514621	C8orf86	Q6ZUL3	223 aa		9.13	□□□□□ -0.95
HIPK1-210	ENST00000514621	PIK3R5	Q8WYR1	880 aa		9.13	□□□□□ -0.95
HIPK1-210	ENST00000514621	NUDT16	Q96DE0	195 aa	Known RBP	9.13	□□□□□ -0.95
HIPK1-210	ENST00000514621	MTMR7	Q9Y216	660 aa		9.13	□□□□□ -0.95
HIPK1-210	ENST00000514621	QRICH2	Q9H0J4	1663 aa		9.13	□□□□□ -0.95
HIPK1-210	ENST00000514621	EVC2	Q86UK5	1308 aa		9.12	□□□□□ -0.95
HIPK1-210	ENST00000514621	TULP4	Q9NRJ4	1543 aa		9.12	□□□□□ -0.95
HIPK1-210	ENST00000514621	ZAP70	P43403	619 aa		9.12	□□□□□ -0.95
HIPK1-210	ENST00000514621	SUZ12	Q15022	739 aa	Known RBP	9.12	□□□□□ -0.95
HIPK1-210	ENST00000514621	FAM26D	Q5JW98	314 aa		9.12	□□□□□ -0.95
HIPK1-210	ENST00000514621	DHX32	Q7L7V1	743 aa	Known RBP	9.12	□□□□□ -0.95
HIPK1-210	ENST00000514621	HELQ	Q8TDG4	1101 aa		9.12	□□□□□ -0.95
HIPK1-210	ENST00000514621	TESK2	Q96S53	571 aa		9.12	□□□□□ -0.95
HIPK1-210	ENST00000514621	ZFAT	Q9P243	1243 aa		9.12	□□□□□ -0.95
HIPK1-210	ENST00000514621	NAGPA	Q9UK23	515 aa		9.12	□□□□□ -0.95
HIPK1-210	ENST00000514621	KCNMB2	Q9Y691	235 aa		9.12	□□□□□ -0.95
HIPK1-210	ENST00000514621	USP32	Q8NFA0	1604 aa		9.12	□□□□□ -0.95
HIPK1-210	ENST00000514621	SBNO2	Q9Y2G9	1366 aa		9.12	□□□□□ -0.95
HIPK1-210	ENST00000514621	CHRNA4	P43681	627 aa		9.11	□□□□□ -0.95
HIPK1-210	ENST00000514621	B4GALNT3	Q6L9W6	998 aa		9.11	□□□□□ -0.95
HIPK1-210	ENST00000514621	CD163	Q86VB7	1156 aa		9.11	□□□□□ -0.95
HIPK1-210	ENST00000514621	PMFBP1	Q8TBY8	1022 aa		9.11	□□□□□ -0.95
HIPK1-210	ENST00000514621	AHDC1	Q5TGY3	1603 aa	Predicted RBP	9.11	□□□□□ -0.95

Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms