RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 DLK2Q6UY11 383 aa17.11■□□□□ 0.33
USP46-209ENST00000514536 SPATA5Q8NB90 893 aa17.11■□□□□ 0.33
USP46-209ENST00000514536 MTMR14Q8NCE2 650 aa17.11■□□□□ 0.33
USP46-209ENST00000514536 PRMT6Q96LA8 375 aaPredicted RBP17.11■□□□□ 0.33
USP46-209ENST00000514536 LRRCC1Q9C099 1032 aa17.11■□□□□ 0.33
USP46-209ENST00000514536 SERPINA10Q9UK55 444 aa17.11■□□□□ 0.33
USP46-209ENST00000514536 SCAF8Q9UPN6 1271 aaKnown RBP17.11■□□□□ 0.33
USP46-209ENST00000514536 SALL1Q9NSC2 1324 aa17.11■□□□□ 0.33
USP46-209ENST00000514536 SMARCA5O60264 1052 aaPredicted RBP17.11■□□□□ 0.33
USP46-209ENST00000514536 LDHBP07195 334 aaKnown RBP17.11■□□□□ 0.33
USP46-209ENST00000514536 IFIT2P09913 472 aaKnown RBP17.11■□□□□ 0.33
USP46-209ENST00000514536 PRDX5P30044 214 aa17.11■□□□□ 0.33
USP46-209ENST00000514536 CRKP46108 304 aa17.11■□□□□ 0.33
USP46-209ENST00000514536 SNRKQ9NRH2 765 aa17.11■□□□□ 0.33
USP46-209ENST00000514536 ABCF2Q9UG63 623 aa17.11■□□□□ 0.33
USP46-209ENST00000514536 PDS5AQ29RF7 1337 aaKnown RBP17.1■□□□□ 0.33
USP46-209ENST00000514536 SPDYE2BA6NHP3 402 aa17.1■□□□□ 0.33
USP46-209ENST00000514536 ADM5C9JUS6 153 aa17.1■□□□□ 0.33
USP46-209ENST00000514536 SPDYE6P0CI01 402 aa17.1■□□□□ 0.33
USP46-209ENST00000514536 HDLBPQ00341 1268 aaKnown RBP17.1■□□□□ 0.33
USP46-209ENST00000514536 SULF1Q8IWU6 871 aa17.1■□□□□ 0.33
USP46-209ENST00000514536 ZGPATQ8N5A5 531 aaKnown RBP17.1■□□□□ 0.33
USP46-209ENST00000514536 MRIQ9BWK5 157 aa17.1■□□□□ 0.33
USP46-209ENST00000514536 AOX1Q06278 1338 aa17.09■□□□□ 0.33
USP46-209ENST00000514536 TBC1D9Q6ZT07 1266 aa17.09■□□□□ 0.33
USP46-209ENST00000514536 TEKT1Q969V4 418 aa17.09■□□□□ 0.33
USP46-209ENST00000514536 ZNF512BQ96KM6 892 aaPredicted RBP17.09■□□□□ 0.33
USP46-209ENST00000514536 ARAP2Q8WZ64 1704 aa17.09■□□□□ 0.33
USP46-209ENST00000514536 MAST3O60307 1309 aa17.08■□□□□ 0.33
USP46-209ENST00000514536 MYO1BO43795 1136 aa17.08■□□□□ 0.32
USP46-209ENST00000514536 SPTY2D1Q68D10 685 aaPredicted RBP17.08■□□□□ 0.32
USP46-209ENST00000514536 TDRD3Q9H7E2 651 aaKnown RBP17.08■□□□□ 0.32
USP46-209ENST00000514536 PITPNM2Q9BZ72 1349 aa17.08■□□□□ 0.32
USP46-209ENST00000514536 CLRN2A0PK11 232 aa17.07■□□□□ 0.32
USP46-209ENST00000514536 HDAC1Q13547 482 aaPredicted RBP17.07■□□□□ 0.32
USP46-209ENST00000514536 DIXDC1Q155Q3 683 aa17.07■□□□□ 0.32
USP46-209ENST00000514536 CST9Q5W186 159 aa17.07■□□□□ 0.32
USP46-209ENST00000514536 ERICH6Q7L0X2 663 aa17.07■□□□□ 0.32
USP46-209ENST00000514536 ZNF408Q9H9D4 720 aa17.07■□□□□ 0.32
USP46-209ENST00000514536 PCNTO95613 3336 aa17.07■□□□□ 0.32
USP46-209ENST00000514536 TMEM88BA6NKF7 163 aa17.06■□□□□ 0.32
USP46-209ENST00000514536 CELF2O95319 508 aaKnown RBP17.06■□□□□ 0.32
USP46-209ENST00000514536 ZAP70P43403 619 aa17.06■□□□□ 0.32
USP46-209ENST00000514536 HHIPL2Q6UWX4 724 aa17.06■□□□□ 0.32
USP46-209ENST00000514536 ZDHHC15Q96MV8 337 aa17.06■□□□□ 0.32
USP46-209ENST00000514536 ZNF70Q9UC06 446 aaPredicted RBP17.06■□□□□ 0.32
USP46-209ENST00000514536 CYP2E1P05181 493 aaPredicted RBP17.06■□□□□ 0.32
USP46-209ENST00000514536 PRAMEF18Q5VWM3 479 aa17.06■□□□□ 0.32
USP46-209ENST00000514536 APOBEC3HQ6NTF7 200 aaKnown RBP17.06■□□□□ 0.32
USP46-209ENST00000514536 DZIP1Q86YF9 867 aaKnown RBP17.06■□□□□ 0.32
USP46-209ENST00000514536 APOBEC3FQ8IUX4 373 aaKnown RBP17.06■□□□□ 0.32
USP46-209ENST00000514536 RWDD1Q9H446 243 aaPredicted RBP17.06■□□□□ 0.32
USP46-209ENST00000514536 VEZTQ9HBM0 779 aa17.06■□□□□ 0.32
USP46-209ENST00000514536 CREBZFQ9NS37 354 aa17.06■□□□□ 0.32
USP46-209ENST00000514536 RAI14Q9P0K7 980 aa17.06■□□□□ 0.32
USP46-209ENST00000514536 CDCA5Q96FF9 252 aa17.05■□□□□ 0.32
USP46-209ENST00000514536 LRP2BPQ9P2M1 347 aa17.05■□□□□ 0.32
USP46-209ENST00000514536 DAGLAQ9Y4D2 1042 aa17.05■□□□□ 0.32
USP46-209ENST00000514536 NDUFB9Q9Y6M9 179 aa17.05■□□□□ 0.32
USP46-209ENST00000514536 MECOMQ03112 1051 aa17.04■□□□□ 0.32
USP46-209ENST00000514536 SPDYE2Q495Y8 402 aa17.04■□□□□ 0.32
USP46-209ENST00000514536 IGHDP01880 384 aa17.03■□□□□ 0.32
USP46-209ENST00000514536 ANKRD45Q5TZF3 282 aa17.03■□□□□ 0.32
USP46-209ENST00000514536 GCC1Q96CN9 775 aa17.03■□□□□ 0.32
USP46-209ENST00000514536 DEFB129Q9H1M3 183 aa17.03■□□□□ 0.32
USP46-209ENST00000514536 PIH1D3Q9NQM4 214 aaKnown RBP17.03■□□□□ 0.32
USP46-209ENST00000514536 POLR2AP24928 1970 aaKnown RBP17.03■□□□□ 0.32
USP46-209ENST00000514536 SLF2Q8IX21 1173 aa17.02■□□□□ 0.32
USP46-209ENST00000514536 ZNF384Q8TF68 577 aa17.02■□□□□ 0.32
USP46-209ENST00000514536 NSUN4Q96CB9 384 aaKnown RBP17.02■□□□□ 0.32
USP46-209ENST00000514536 ABT1Q9ULW3 272 aaKnown RBP17.02■□□□□ 0.32
USP46-209ENST00000514536 MYH13Q9UKX3 1938 aa17.02■□□□□ 0.31
USP46-209ENST00000514536 TCP10L2B9ZVM9 353 aa17.02■□□□□ 0.31
USP46-209ENST00000514536 CACNB3P54284 484 aa17.02■□□□□ 0.31
USP46-209ENST00000514536 COL13A1Q5TAT6 717 aaPredicted RBP17.02■□□□□ 0.31
USP46-209ENST00000514536 FAM163AQ96GL9 167 aaPredicted RBP17.02■□□□□ 0.31
USP46-209ENST00000514536 BOLA2Q9H3K6 86 aa17.02■□□□□ 0.31
USP46-209ENST00000514536 ANTXR1Q9H6X2 564 aa17.02■□□□□ 0.31
USP46-209ENST00000514536 ZBTB47Q9UFB7 747 aaPredicted RBP17.02■□□□□ 0.31
USP46-209ENST00000514536 LDHCP07864 332 aa17.01■□□□□ 0.31
USP46-209ENST00000514536 ATP5JP18859 108 aa17.01■□□□□ 0.31
USP46-209ENST00000514536 GSTO1P78417 241 aa17.01■□□□□ 0.31
USP46-209ENST00000514536 RASA3Q14644 834 aa17.01■□□□□ 0.31
USP46-209ENST00000514536 CDC42EP5Q6NZY7 148 aa17.01■□□□□ 0.31
USP46-209ENST00000514536 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.01■□□□□ 0.31
USP46-209ENST00000514536 USP40Q9NVE5 1235 aa17.01■□□□□ 0.31
USP46-209ENST00000514536 TNFAIP1Q13829 316 aa17■□□□□ 0.31
USP46-209ENST00000514536 DNAJC2Q99543 621 aaKnown RBP17■□□□□ 0.31
USP46-209ENST00000514536 GBA2Q9HCG7 927 aaPredicted RBP17■□□□□ 0.31
USP46-209ENST00000514536 ECHDC1Q9NTX5 307 aa17■□□□□ 0.31
USP46-209ENST00000514536 TMOD2Q9NZR1 351 aa17■□□□□ 0.31
USP46-209ENST00000514536 GAKO14976 1311 aa17■□□□□ 0.31
USP46-209ENST00000514536 IDH1O75874 414 aaKnown RBP16.99■□□□□ 0.31
USP46-209ENST00000514536 BTDP43251 543 aa16.99■□□□□ 0.31
USP46-209ENST00000514536 NAA16Q6N069 864 aaPredicted RBP16.99■□□□□ 0.31
USP46-209ENST00000514536 C2orf69Q8N8R5 385 aa16.99■□□□□ 0.31
USP46-209ENST00000514536 MKRN1Q9UHC7 482 aaKnown RBP16.99■□□□□ 0.31
USP46-209ENST00000514536 TLL2Q9Y6L7 1015 aa16.99■□□□□ 0.31
USP46-209ENST00000514536 MROH7-TTC4A0A0A0MT08 1334 aa16.99■□□□□ 0.31
USP46-209ENST00000514536 GPR75-ASB3A0A0A6YYF3 556 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms