RNA–Protein interactions for RNA: ENST00000514493.5

SSBP2-218, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SSBP2, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-218ENST00000514493 LAMA4Q16363 1823 aa23.63■■□□□ 1.37
SSBP2-218ENST00000514493 GPAA1O43292 621 aa23.63■■□□□ 1.37
SSBP2-218ENST00000514493 PRDX5P30044 214 aa23.63■■□□□ 1.37
SSBP2-218ENST00000514493 SNX21Q969T3 373 aa23.63■■□□□ 1.37
SSBP2-218ENST00000514493 SLC4A3P48751 1232 aa23.62■■□□□ 1.37
SSBP2-218ENST00000514493 KIAA2012Q0VF49 1180 aa23.62■■□□□ 1.37
SSBP2-218ENST00000514493 TBC1D22AQ8WUA7 517 aa23.62■■□□□ 1.37
SSBP2-218ENST00000514493 DSCC1Q9BVC3 393 aa23.62■■□□□ 1.37
SSBP2-218ENST00000514493 RBM8AQ9Y5S9 174 aaKnown RBP23.62■■□□□ 1.37
SSBP2-218ENST00000514493 NSUN4Q96CB9 384 aaKnown RBP23.61■■□□□ 1.37
SSBP2-218ENST00000514493 IL17RAQ96F46 866 aa23.61■■□□□ 1.37
SSBP2-218ENST00000514493 PALD1Q9ULE6 856 aa23.61■■□□□ 1.37
SSBP2-218ENST00000514493 CYP7A1P22680 504 aa23.6■■□□□ 1.37
SSBP2-218ENST00000514493 DOK7Q18PE1 504 aa23.6■■□□□ 1.37
SSBP2-218ENST00000514493 ZNF384Q8TF68 577 aa23.6■■□□□ 1.37
SSBP2-218ENST00000514493 G3V3G9 751 aa23.6■■□□□ 1.37
SSBP2-218ENST00000514493 LDHBP07195 334 aaKnown RBP23.6■■□□□ 1.37
SSBP2-218ENST00000514493 HSPD1P10809 573 aaKnown RBP23.6■■□□□ 1.37
SSBP2-218ENST00000514493 MECOMQ03112 1051 aa23.6■■□□□ 1.37
SSBP2-218ENST00000514493 AOC3Q16853 763 aa23.6■■□□□ 1.37
SSBP2-218ENST00000514493 DCAF8Q5TAQ9 597 aa23.6■■□□□ 1.37
SSBP2-218ENST00000514493 VPS53Q5VIR6 699 aa23.6■■□□□ 1.37
SSBP2-218ENST00000514493 NAA16Q6N069 864 aaPredicted RBP23.6■■□□□ 1.37
SSBP2-218ENST00000514493 PODNQ7Z5L7 613 aa23.6■■□□□ 1.37
SSBP2-218ENST00000514493 HSCBQ8IWL3 235 aa23.6■■□□□ 1.37
SSBP2-218ENST00000514493 AIDAQ96BJ3 306 aa23.6■■□□□ 1.37
SSBP2-218ENST00000514493 NECTIN1Q15223 517 aa23.59■■□□□ 1.37
SSBP2-218ENST00000514493 DZIP1Q86YF9 867 aaKnown RBP23.59■■□□□ 1.37
SSBP2-218ENST00000514493 DBNDD1Q9H9R9 158 aa23.59■■□□□ 1.37
SSBP2-218ENST00000514493 U3KPZ7 1027 aaPredicted RBP23.59■■□□□ 1.37
SSBP2-218ENST00000514493 PPIP5K2O43314 1243 aa23.58■■□□□ 1.37
SSBP2-218ENST00000514493 ECE2O60344 883 aa23.58■■□□□ 1.37
SSBP2-218ENST00000514493 GTF2IP78347 998 aa23.58■■□□□ 1.37
SSBP2-218ENST00000514493 MFSD14BQ5SR56 506 aa23.58■■□□□ 1.37
SSBP2-218ENST00000514493 ADGRA1Q86SQ6 560 aa23.58■■□□□ 1.37
SSBP2-218ENST00000514493 KCNB2Q92953 911 aa23.58■■□□□ 1.37
SSBP2-218ENST00000514493 FOXP2O15409 715 aa23.57■■□□□ 1.36
SSBP2-218ENST00000514493 MBD4O95243 580 aa23.57■■□□□ 1.36
SSBP2-218ENST00000514493 YBX3P16989 372 aaKnown RBP eCLIP23.57■■□□□ 1.369e-8■■□□□ 11.5
SSBP2-218ENST00000514493 CREB3L3Q68CJ9 461 aa23.57■■□□□ 1.36
SSBP2-218ENST00000514493 STRBPQ96SI9 672 aaKnown RBP23.57■■□□□ 1.36
SSBP2-218ENST00000514493 COL4A5P29400 1685 aa23.57■■□□□ 1.36
SSBP2-218ENST00000514493 CDK5RAP2Q96SN8 1893 aa23.56■■□□□ 1.36
SSBP2-218ENST00000514493 GRIK5Q16478 980 aa23.56■■□□□ 1.36
SSBP2-218ENST00000514493 VPS33BQ9H267 617 aa23.56■■□□□ 1.36
SSBP2-218ENST00000514493 BCS1LQ9Y276 419 aa23.56■■□□□ 1.36
SSBP2-218ENST00000514493 SUGT1Q9Y2Z0 365 aa23.55■■□□□ 1.36
SSBP2-218ENST00000514493 SNX14Q9Y5W7 946 aa23.55■■□□□ 1.36
SSBP2-218ENST00000514493 SLC27A2O14975 620 aa23.55■■□□□ 1.36
SSBP2-218ENST00000514493 RNF20Q5VTR2 975 aa23.55■■□□□ 1.36
SSBP2-218ENST00000514493 TTLL5Q6EMB2 1281 aa23.55■■□□□ 1.36
SSBP2-218ENST00000514493 RASEFQ8IZ41 740 aa23.55■■□□□ 1.36
SSBP2-218ENST00000514493 LCORLQ8N3X6 602 aa23.55■■□□□ 1.36
SSBP2-218ENST00000514493 MIGA1Q8NAN2 632 aa23.55■■□□□ 1.36
SSBP2-218ENST00000514493 ARMT1Q9H993 441 aa23.55■■□□□ 1.36
SSBP2-218ENST00000514493 BAZ2AQ9UIF9 1905 aaKnown RBP23.54■■□□□ 1.36
SSBP2-218ENST00000514493 MAGEB6P1A0A0J9YX57 407 aa23.54■■□□□ 1.36
SSBP2-218ENST00000514493 GNAT2P19087 354 aa23.54■■□□□ 1.36
SSBP2-218ENST00000514493 GSTO1P78417 241 aa23.54■■□□□ 1.36
SSBP2-218ENST00000514493 FBXW7Q969H0 707 aa23.54■■□□□ 1.36
SSBP2-218ENST00000514493 RIOK1Q9BRS2 568 aaKnown RBP23.54■■□□□ 1.36
SSBP2-218ENST00000514493 TAOK3Q9H2K8 898 aa23.54■■□□□ 1.36
SSBP2-218ENST00000514493 ZNF277Q9NRM2 450 aaPredicted RBP23.54■■□□□ 1.36
SSBP2-218ENST00000514493 ST18O60284 1047 aa23.53■■□□□ 1.36
SSBP2-218ENST00000514493 ZKSCAN1P17029 563 aaPredicted RBP23.53■■□□□ 1.36
SSBP2-218ENST00000514493 ZMYM6O95789 1325 aa23.53■■□□□ 1.36
SSBP2-218ENST00000514493 ADAMTSL1Q8N6G6 1762 aa23.53■■□□□ 1.36
SSBP2-218ENST00000514493 CD2BP2O95400 341 aaKnown RBP23.52■■□□□ 1.36
SSBP2-218ENST00000514493 FKBP1AP62942 108 aaKnown RBP23.52■■□□□ 1.36
SSBP2-218ENST00000514493 STRIP1Q5VSL9 837 aa23.52■■□□□ 1.36
SSBP2-218ENST00000514493 CERS5Q8N5B7 392 aa23.52■■□□□ 1.36
SSBP2-218ENST00000514493 LAMB1P07942 1786 aa23.52■■□□□ 1.36
SSBP2-218ENST00000514493 FOCADQ5VW36 1801 aa23.52■■□□□ 1.36
SSBP2-218ENST00000514493 LARGE2Q8N3Y3 721 aa23.52■■□□□ 1.36
SSBP2-218ENST00000514493 IL27Q8NEV9 243 aa23.52■■□□□ 1.36
SSBP2-218ENST00000514493 MROH7-TTC4A0A0A0MT08 1334 aa23.51■■□□□ 1.35
SSBP2-218ENST00000514493 LTBP3Q9NS15 1303 aa23.51■■□□□ 1.35
SSBP2-218ENST00000514493 NAV1Q8NEY1 1877 aa23.51■■□□□ 1.35
SSBP2-218ENST00000514493 RPAP1Q9BWH6 1393 aaPredicted RBP23.51■■□□□ 1.35
SSBP2-218ENST00000514493 NFKBIEO00221 500 aa23.51■■□□□ 1.35
SSBP2-218ENST00000514493 IARSP41252 1262 aaKnown RBP23.51■■□□□ 1.35
SSBP2-218ENST00000514493 GPR162Q16538 588 aa23.51■■□□□ 1.35
SSBP2-218ENST00000514493 CTNNA3Q9UI47 895 aa23.51■■□□□ 1.35
SSBP2-218ENST00000514493 TIAM2Q8IVF5 1701 aa23.5■■□□□ 1.35
SSBP2-218ENST00000514493 DIXDC1Q155Q3 683 aa23.5■■□□□ 1.35
SSBP2-218ENST00000514493 TSGA10IPQ3SY00 556 aa23.5■■□□□ 1.35
SSBP2-218ENST00000514493 KCNQ5Q9NR82 932 aa23.5■■□□□ 1.35
SSBP2-218ENST00000514493 USP17L3A6NCW0 530 aa23.5■■□□□ 1.35
SSBP2-218ENST00000514493 USP17L4A6NCW7 530 aa23.5■■□□□ 1.35
SSBP2-218ENST00000514493 YDJCA8MPS7 323 aa23.5■■□□□ 1.35
SSBP2-218ENST00000514493 PATL2C9JE40 543 aaKnown RBP23.5■■□□□ 1.35
SSBP2-218ENST00000514493 K7ELQ4 463 aaPredicted RBP23.5■■□□□ 1.35
SSBP2-218ENST00000514493 LDHCP07864 332 aa23.5■■□□□ 1.35
SSBP2-218ENST00000514493 CYP21A2P08686 494 aa23.5■■□□□ 1.35
SSBP2-218ENST00000514493 DACT2Q5SW24 774 aa23.5■■□□□ 1.35
SSBP2-218ENST00000514493 USP17L1Q7RTZ2 530 aa23.5■■□□□ 1.35
SSBP2-218ENST00000514493 EPB41L4AQ9HCS5 686 aaPredicted RBP23.5■■□□□ 1.35
SSBP2-218ENST00000514493 ECM29Q5VYK3 1845 aa23.5■■□□□ 1.35
SSBP2-218ENST00000514493 DICER1Q9UPY3 1922 aaKnown RBP23.49■■□□□ 1.35
SSBP2-218ENST00000514493 FGAP02671 866 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms