RNA–Protein interactions for RNA: ENST00000513895.1

LINC00616-204, long intergenic non-protein coding RNA 616, humanhuman

TSL 3

Gene LINC00616, Length 566 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00616-204ENST00000513895 FER1L4A9Z1Z3 1794 aa8.6□□□□□ -1.03
LINC00616-204ENST00000513895 EFCAB6Q5THR3 1501 aa8.59□□□□□ -1.03
LINC00616-204ENST00000513895 MADDQ8WXG6 1647 aa8.59□□□□□ -1.03
LINC00616-204ENST00000513895 PSAPP07602 524 aa8.59□□□□□ -1.03
LINC00616-204ENST00000513895 MRPL18Q9H0U6 180 aaKnown RBP8.59□□□□□ -1.03
LINC00616-204ENST00000513895 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.59□□□□□ -1.03
LINC00616-204ENST00000513895 ZMYM3Q14202 1370 aa8.59□□□□□ -1.03
LINC00616-204ENST00000513895 PTPRTO14522 1441 aa8.58□□□□□ -1.04
LINC00616-204ENST00000513895 NPATQ14207 1427 aa8.58□□□□□ -1.04
LINC00616-204ENST00000513895 LOC102724428A0A0B4J2F2 783 aa8.58□□□□□ -1.04
LINC00616-204ENST00000513895 J3QW42 95 aa8.58□□□□□ -1.04
LINC00616-204ENST00000513895 MMP20O60882 483 aa8.58□□□□□ -1.04
LINC00616-204ENST00000513895 HOXD8P13378 290 aaPredicted RBP8.58□□□□□ -1.04
LINC00616-204ENST00000513895 SOX18P35713 384 aa8.58□□□□□ -1.04
LINC00616-204ENST00000513895 SIK1P57059 783 aa8.58□□□□□ -1.04
LINC00616-204ENST00000513895 GDF6Q6KF10 455 aaPredicted RBP8.58□□□□□ -1.04
LINC00616-204ENST00000513895 CMTR1Q8N1G2 835 aaKnown RBP8.58□□□□□ -1.04
LINC00616-204ENST00000513895 NSUN5Q96P11 429 aaKnown RBP8.58□□□□□ -1.04
LINC00616-204ENST00000513895 SRA1Q9HD15 236 aaKnown RBP8.58□□□□□ -1.04
LINC00616-204ENST00000513895 KCNMB2Q9Y691 235 aa8.58□□□□□ -1.04
LINC00616-204ENST00000513895 PLA2R1Q13018 1463 aa8.57□□□□□ -1.04
LINC00616-204ENST00000513895 RPRD2Q5VT52 1461 aaKnown RBP8.57□□□□□ -1.04
LINC00616-204ENST00000513895 PATL2C9JE40 543 aaKnown RBP8.57□□□□□ -1.04
LINC00616-204ENST00000513895 E9PSI1 815 aa8.57□□□□□ -1.04
LINC00616-204ENST00000513895 F8W735 103 aaPredicted RBP8.57□□□□□ -1.04
LINC00616-204ENST00000513895 GHRHP01286 108 aa8.57□□□□□ -1.04
LINC00616-204ENST00000513895 LCE3BQ5TA77 95 aa8.57□□□□□ -1.04
LINC00616-204ENST00000513895 TMEM130Q8N3G9 435 aa8.57□□□□□ -1.04
LINC00616-204ENST00000513895 FAM200AQ8TCP9 573 aa8.57□□□□□ -1.04
LINC00616-204ENST00000513895 ANKRD30BQ9BXX2 1392 aa8.57□□□□□ -1.04
LINC00616-204ENST00000513895 C3P01024 1663 aa8.56□□□□□ -1.04
LINC00616-204ENST00000513895 RIMS1Q86UR5 1692 aaKnown RBP8.56□□□□□ -1.04
LINC00616-204ENST00000513895 NOS1P29475 1434 aa8.56□□□□□ -1.04
LINC00616-204ENST00000513895 ALX3O95076 343 aa8.56□□□□□ -1.04
LINC00616-204ENST00000513895 FKBP5Q13451 457 aaPredicted RBP8.56□□□□□ -1.04
LINC00616-204ENST00000513895 COX20Q5RI15 118 aa8.56□□□□□ -1.04
LINC00616-204ENST00000513895 CFAP70Q5T0N1 1121 aa8.56□□□□□ -1.04
LINC00616-204ENST00000513895 DCAF11Q8TEB1 546 aa8.56□□□□□ -1.04
LINC00616-204ENST00000513895 PREX1Q8TCU6 1659 aa8.56□□□□□ -1.04
LINC00616-204ENST00000513895 SPHKAPQ2M3C7 1700 aa8.55□□□□□ -1.04
LINC00616-204ENST00000513895 CFAP65Q6ZU64 1925 aaKnown RBP8.55□□□□□ -1.04
LINC00616-204ENST00000513895 FSTP19883 344 aa8.55□□□□□ -1.04
LINC00616-204ENST00000513895 SETDB1Q15047 1291 aa8.55□□□□□ -1.04
LINC00616-204ENST00000513895 Q6ZS46 218 aa8.55□□□□□ -1.04
LINC00616-204ENST00000513895 MAP4K3Q8IVH8 894 aa8.55□□□□□ -1.04
LINC00616-204ENST00000513895 IL22RA1Q8N6P7 574 aa8.55□□□□□ -1.04
LINC00616-204ENST00000513895 RBSNQ9H1K0 784 aa8.55□□□□□ -1.04
LINC00616-204ENST00000513895 SPATA31D1Q6ZQQ2 1576 aa8.55□□□□□ -1.04
LINC00616-204ENST00000513895 CLSPNQ9HAW4 1339 aa8.54□□□□□ -1.04
LINC00616-204ENST00000513895 SYNMO15061 1565 aa8.54□□□□□ -1.04
LINC00616-204ENST00000513895 ERVK-7P63135 1459 aa8.54□□□□□ -1.04
LINC00616-204ENST00000513895 CEBPAP49715 358 aaPredicted RBP8.54□□□□□ -1.04
LINC00616-204ENST00000513895 SLC51AQ86UW1 340 aa8.54□□□□□ -1.04
LINC00616-204ENST00000513895 TRPM2O94759 1503 aa8.54□□□□□ -1.04
LINC00616-204ENST00000513895 PTPRMP28827 1452 aa8.53□□□□□ -1.04
LINC00616-204ENST00000513895 KCNA1Q09470 495 aa8.53□□□□□ -1.04
LINC00616-204ENST00000513895 TRIP4Q15650 581 aaPredicted RBP8.53□□□□□ -1.04
LINC00616-204ENST00000513895 CCER1Q8TC90 406 aaPredicted RBP8.53□□□□□ -1.04
LINC00616-204ENST00000513895 PCMTD2Q9NV79 361 aa8.53□□□□□ -1.04
LINC00616-204ENST00000513895 TRIM33Q9UPN9 1127 aa8.53□□□□□ -1.04
LINC00616-204ENST00000513895 PIK3C2BO00750 1634 aa8.53□□□□□ -1.04
LINC00616-204ENST00000513895 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.52□□□□□ -1.05
LINC00616-204ENST00000513895 NLRP13Q86W25 1043 aa8.52□□□□□ -1.05
LINC00616-204ENST00000513895 ETFBKMTQ8IXQ9 262 aa8.52□□□□□ -1.05
LINC00616-204ENST00000513895 CACTIN-AS1Q8N1I8 211 aa8.52□□□□□ -1.05
LINC00616-204ENST00000513895 AGGF1Q8N302 714 aaeCLIP8.52□□□□□ -1.05
LINC00616-204ENST00000513895 NOVA2Q9UNW9 492 aaKnown RBP8.52□□□□□ -1.05
LINC00616-204ENST00000513895 CLTCL1P53675 1640 aa8.51□□□□□ -1.05
LINC00616-204ENST00000513895 BRD1O95696 1058 aa8.51□□□□□ -1.05
LINC00616-204ENST00000513895 MCTP1Q6DN14 999 aa8.51□□□□□ -1.05
LINC00616-204ENST00000513895 SIN3AQ96ST3 1273 aa8.51□□□□□ -1.05
LINC00616-204ENST00000513895 SLC52A1Q9NWF4 448 aa8.51□□□□□ -1.05
LINC00616-204ENST00000513895 BRD2P25440 801 aaKnown RBP8.5□□□□□ -1.05
LINC00616-204ENST00000513895 IDI1Q13907 227 aa8.5□□□□□ -1.05
LINC00616-204ENST00000513895 SWI5Q1ZZU3 235 aa8.5□□□□□ -1.05
LINC00616-204ENST00000513895 PBXIP1Q96AQ6 731 aa8.5□□□□□ -1.05
LINC00616-204ENST00000513895 PRIMPOLQ96LW4 560 aa8.5□□□□□ -1.05
LINC00616-204ENST00000513895 MUC3BQ9H195 1237 aa8.5□□□□□ -1.05
LINC00616-204ENST00000513895 UGGT1Q9NYU2 1555 aa8.5□□□□□ -1.05
LINC00616-204ENST00000513895 SETD1BQ9UPS6 1966 aaKnown RBP8.5□□□□□ -1.05
LINC00616-204ENST00000513895 TNRQ92752 1358 aa8.49□□□□□ -1.05
LINC00616-204ENST00000513895 NEURL4Q96JN8 1562 aa8.49□□□□□ -1.05
LINC00616-204ENST00000513895 CCDC144AA2RUR9 1427 aa8.49□□□□□ -1.05
LINC00616-204ENST00000513895 GLB1P16278 677 aa8.49□□□□□ -1.05
LINC00616-204ENST00000513895 RFX1P22670 979 aa8.49□□□□□ -1.05
LINC00616-204ENST00000513895 SSTR4P31391 388 aa8.49□□□□□ -1.05
LINC00616-204ENST00000513895 CD97P48960 835 aa8.49□□□□□ -1.05
LINC00616-204ENST00000513895 CDCA8Q53HL2 280 aa8.49□□□□□ -1.05
LINC00616-204ENST00000513895 KRTAP19-1Q8IUB9 90 aa8.49□□□□□ -1.05
LINC00616-204ENST00000513895 OR13H1Q8NG92 308 aa8.49□□□□□ -1.05
LINC00616-204ENST00000513895 SAP130Q9H0E3 1048 aa8.49□□□□□ -1.05
LINC00616-204ENST00000513895 RAXQ9Y2V3 346 aa8.49□□□□□ -1.05
LINC00616-204ENST00000513895 PPME1Q9Y570 386 aa8.49□□□□□ -1.05
LINC00616-204ENST00000513895 SPATA31E1Q6ZUB1 1445 aa8.48□□□□□ -1.05
LINC00616-204ENST00000513895 KIF1BO60333 1816 aa8.48□□□□□ -1.05
LINC00616-204ENST00000513895 PRMT3O60678 531 aa8.48□□□□□ -1.05
LINC00616-204ENST00000513895 OCLNQ16625 522 aa8.48□□□□□ -1.05
LINC00616-204ENST00000513895 C16orf46Q6P387 395 aa8.48□□□□□ -1.05
LINC00616-204ENST00000513895 GALNT11Q8NCW6 608 aa8.48□□□□□ -1.05
LINC00616-204ENST00000513895 USTQ9Y2C2 406 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms