RNA–Protein interactions for RNA: ENST00000513609.1

CSF1R-206, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 5

Gene CSF1R, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-206ENST00000513609 AOX1Q06278 1338 aa16.63■□□□□ 0.25
CSF1R-206ENST00000513609 IGF2BP3O00425 579 aaKnown RBP eCLIP16.62■□□□□ 0.25
CSF1R-206ENST00000513609 MAP3K9P80192 1104 aa16.62■□□□□ 0.25
CSF1R-206ENST00000513609 RABL6Q3YEC7 729 aaPredicted RBP16.62■□□□□ 0.25
CSF1R-206ENST00000513609 SSH1Q8WYL5 1049 aa16.62■□□□□ 0.25
CSF1R-206ENST00000513609 ERO1AQ96HE7 468 aa16.62■□□□□ 0.25
CSF1R-206ENST00000513609 CRHR2Q13324 411 aa16.61■□□□□ 0.25
CSF1R-206ENST00000513609 ARHGEF6Q15052 776 aa16.61■□□□□ 0.25
CSF1R-206ENST00000513609 PUM3Q15397 648 aaKnown RBP16.61■□□□□ 0.25
CSF1R-206ENST00000513609 ANKRD44Q8N8A2 993 aa16.61■□□□□ 0.25
CSF1R-206ENST00000513609 HOOK2Q96ED9 719 aa16.61■□□□□ 0.25
CSF1R-206ENST00000513609 POLR2AP24928 1970 aaKnown RBP16.6■□□□□ 0.25
CSF1R-206ENST00000513609 SLC5A1P13866 664 aa16.6■□□□□ 0.25
CSF1R-206ENST00000513609 CACNB3P54284 484 aa16.6■□□□□ 0.25
CSF1R-206ENST00000513609 HDLBPQ00341 1268 aaKnown RBP16.6■□□□□ 0.25
CSF1R-206ENST00000513609 USP44Q9H0E7 712 aa16.6■□□□□ 0.25
CSF1R-206ENST00000513609 EFCC1Q9HA90 598 aa16.6■□□□□ 0.25
CSF1R-206ENST00000513609 SMC4Q9NTJ3 1288 aa16.6■□□□□ 0.25
CSF1R-206ENST00000513609 GJA5P36382 358 aa16.59■□□□□ 0.25
CSF1R-206ENST00000513609 GTF2A2P52657 109 aa16.59■□□□□ 0.25
CSF1R-206ENST00000513609 SP3Q02447 781 aa16.59■□□□□ 0.25
CSF1R-206ENST00000513609 VGLL4Q14135 290 aa16.59■□□□□ 0.25
CSF1R-206ENST00000513609 GRIK5Q16478 980 aa16.59■□□□□ 0.25
CSF1R-206ENST00000513609 OTOP1Q7RTM1 612 aa16.59■□□□□ 0.25
CSF1R-206ENST00000513609 OTUD5Q96G74 571 aa16.59■□□□□ 0.25
CSF1R-206ENST00000513609 MAST3O60307 1309 aa16.59■□□□□ 0.25
CSF1R-206ENST00000513609 CCL15-CCL14A0A0B4J2E2 113 aa16.58■□□□□ 0.24
CSF1R-206ENST00000513609 SLC34A2O95436 690 aa16.58■□□□□ 0.24
CSF1R-206ENST00000513609 SLFN5Q08AF3 891 aa16.58■□□□□ 0.24
CSF1R-206ENST00000513609 CCL15Q16663 113 aa16.58■□□□□ 0.24
CSF1R-206ENST00000513609 INTS3Q68E01 1043 aaKnown RBP16.58■□□□□ 0.24
CSF1R-206ENST00000513609 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.58■□□□□ 0.24
CSF1R-206ENST00000513609 CDAN1Q8IWY9 1227 aa16.58■□□□□ 0.24
CSF1R-206ENST00000513609 CD99L2Q8TCZ2 262 aa16.58■□□□□ 0.24
CSF1R-206ENST00000513609 LPIN2Q92539 896 aa16.58■□□□□ 0.24
CSF1R-206ENST00000513609 ZDHHC15Q96MV8 337 aa16.58■□□□□ 0.24
CSF1R-206ENST00000513609 TEPSINQ96N21 525 aa16.58■□□□□ 0.24
CSF1R-206ENST00000513609 PTPN18Q99952 460 aa16.58■□□□□ 0.24
CSF1R-206ENST00000513609 MRIQ9BWK5 157 aa16.58■□□□□ 0.24
CSF1R-206ENST00000513609 ZFYVE28Q9HCC9 887 aa16.58■□□□□ 0.24
CSF1R-206ENST00000513609 GNL3LQ9NVN8 582 aaKnown RBP16.58■□□□□ 0.24
CSF1R-206ENST00000513609 HDAC5Q9UQL6 1122 aa16.58■□□□□ 0.24
CSF1R-206ENST00000513609 ZNF521Q96K83 1311 aa16.58■□□□□ 0.24
CSF1R-206ENST00000513609 EYA2O00167 538 aa16.57■□□□□ 0.24
CSF1R-206ENST00000513609 UBTFL1P0CB47 393 aaPredicted RBP16.57■□□□□ 0.24
CSF1R-206ENST00000513609 WDR66Q8TBY9 1149 aa16.57■□□□□ 0.24
CSF1R-206ENST00000513609 CNKSR2Q8WXI2 1034 aa16.57■□□□□ 0.24
CSF1R-206ENST00000513609 SIL1Q9H173 461 aa16.57■□□□□ 0.24
CSF1R-206ENST00000513609 CEP126Q9P2H0 1117 aa16.57■□□□□ 0.24
CSF1R-206ENST00000513609 SUGT1Q9Y2Z0 365 aa16.57■□□□□ 0.24
CSF1R-206ENST00000513609 TESPA1A2RU30 521 aaPredicted RBP16.56■□□□□ 0.24
CSF1R-206ENST00000513609 TAF1CQ15572 869 aaPredicted RBP16.56■□□□□ 0.24
CSF1R-206ENST00000513609 ALDH1L2Q3SY69 923 aa16.56■□□□□ 0.24
CSF1R-206ENST00000513609 PRPF38BQ5VTL8 546 aaKnown RBP16.56■□□□□ 0.24
CSF1R-206ENST00000513609 DCAF15Q66K64 600 aa16.56■□□□□ 0.24
CSF1R-206ENST00000513609 VGLL2Q8N8G2 317 aa16.56■□□□□ 0.24
CSF1R-206ENST00000513609 WRNIP1Q96S55 665 aa16.56■□□□□ 0.24
CSF1R-206ENST00000513609 PTPN22Q9Y2R2 807 aa16.56■□□□□ 0.24
CSF1R-206ENST00000513609 CETPP11597 493 aa16.55■□□□□ 0.24
CSF1R-206ENST00000513609 HHIPL2Q6UWX4 724 aa16.55■□□□□ 0.24
CSF1R-206ENST00000513609 MIGA2Q7L4E1 593 aa16.55■□□□□ 0.24
CSF1R-206ENST00000513609 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.55■□□□□ 0.24
CSF1R-206ENST00000513609 BRI3BPQ8WY22 251 aa16.55■□□□□ 0.24
CSF1R-206ENST00000513609 ZKSCAN4Q969J2 545 aaPredicted RBP16.55■□□□□ 0.24
CSF1R-206ENST00000513609 CDCA7LQ96GN5 454 aa16.55■□□□□ 0.24
CSF1R-206ENST00000513609 MS4A4AQ96JQ5 239 aa16.55■□□□□ 0.24
CSF1R-206ENST00000513609 NOB1Q9ULX3 412 aaKnown RBP16.55■□□□□ 0.24
CSF1R-206ENST00000513609 SSC5DA1L4H1 1573 aa16.55■□□□□ 0.24
CSF1R-206ENST00000513609 SNAPC2Q13487 334 aa16.54■□□□□ 0.24
CSF1R-206ENST00000513609 KIF22Q14807 665 aa16.54■□□□□ 0.24
CSF1R-206ENST00000513609 APOBEC3HQ6NTF7 200 aaKnown RBP16.54■□□□□ 0.24
CSF1R-206ENST00000513609 NBPF11Q86T75 865 aa16.54■□□□□ 0.24
CSF1R-206ENST00000513609 FAM83AQ86UY5 434 aa16.54■□□□□ 0.24
CSF1R-206ENST00000513609 TMEM106CQ9BVX2 250 aa16.54■□□□□ 0.24
CSF1R-206ENST00000513609 KIF16BQ96L93 1317 aa16.53■□□□□ 0.24
CSF1R-206ENST00000513609 FGFR2P21802 821 aa16.53■□□□□ 0.24
CSF1R-206ENST00000513609 TCP10Q12799 353 aa16.53■□□□□ 0.24
CSF1R-206ENST00000513609 ATP2B3Q16720 1220 aa16.53■□□□□ 0.24
CSF1R-206ENST00000513609 FKBP1CQ5VVH2 108 aa16.53■□□□□ 0.24
CSF1R-206ENST00000513609 ERO1BQ86YB8 467 aa16.53■□□□□ 0.24
CSF1R-206ENST00000513609 ZNF341Q9BYN7 854 aa16.53■□□□□ 0.24
CSF1R-206ENST00000513609 SPEF2Q9C093 1822 aa16.53■□□□□ 0.24
CSF1R-206ENST00000513609 LDHBP07195 334 aaKnown RBP16.52■□□□□ 0.24
CSF1R-206ENST00000513609 FAM43AQ8N2R8 423 aa16.52■□□□□ 0.24
CSF1R-206ENST00000513609 API5Q9BZZ5 524 aaKnown RBP16.52■□□□□ 0.24
CSF1R-206ENST00000513609 USP40Q9NVE5 1235 aa16.52■□□□□ 0.24
CSF1R-206ENST00000513609 MYH3P11055 1940 aa16.51■□□□□ 0.23
CSF1R-206ENST00000513609 SPDYE5A6NIY4 337 aa16.51■□□□□ 0.23
CSF1R-206ENST00000513609 IL15P40933 162 aaPredicted RBP16.51■□□□□ 0.23
CSF1R-206ENST00000513609 RFX5P48382 616 aaPredicted RBP16.51■□□□□ 0.23
CSF1R-206ENST00000513609 SLC4A8Q2Y0W8 1093 aa16.51■□□□□ 0.23
CSF1R-206ENST00000513609 SLC9C1Q4G0N8 1177 aa16.51■□□□□ 0.23
CSF1R-206ENST00000513609 FAM151AQ8WW52 585 aa16.51■□□□□ 0.23
CSF1R-206ENST00000513609 PSME4Q14997 1843 aa16.51■□□□□ 0.23
CSF1R-206ENST00000513609 AKAP11Q9UKA4 1901 aa16.51■□□□□ 0.23
CSF1R-206ENST00000513609 IRF6O14896 467 aa16.5■□□□□ 0.23
CSF1R-206ENST00000513609 CIAO1O76071 339 aa16.5■□□□□ 0.23
CSF1R-206ENST00000513609 ECM2O94769 699 aaPredicted RBP16.5■□□□□ 0.23
CSF1R-206ENST00000513609 MYCP01106 439 aaPredicted RBP16.5■□□□□ 0.23
CSF1R-206ENST00000513609 ATG9AQ7Z3C6 839 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms