RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 GNRH1P01148 92 aa17.76■□□□□ 0.43
SPCS3-204ENST00000513139 CCL15Q16663 113 aa17.76■□□□□ 0.43
SPCS3-204ENST00000513139 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.76■□□□□ 0.43
SPCS3-204ENST00000513139 SERPINA10Q9UK55 444 aa17.76■□□□□ 0.43
SPCS3-204ENST00000513139 ZSWIM8A7E2V4 1837 aa17.76■□□□□ 0.43
SPCS3-204ENST00000513139 FAM205AQ6ZU69 1335 aa17.75■□□□□ 0.43
SPCS3-204ENST00000513139 H0YGN5 161 aa17.75■□□□□ 0.43
SPCS3-204ENST00000513139 DDX10Q13206 875 aaKnown RBP17.75■□□□□ 0.43
SPCS3-204ENST00000513139 MKRN4PQ13434 485 aaPredicted RBP17.75■□□□□ 0.43
SPCS3-204ENST00000513139 HELBQ8NG08 1087 aaPredicted RBP17.75■□□□□ 0.43
SPCS3-204ENST00000513139 LINS1Q8NG48 757 aa17.75■□□□□ 0.43
SPCS3-204ENST00000513139 TEPSINQ96N21 525 aa17.75■□□□□ 0.43
SPCS3-204ENST00000513139 ZCCHC17Q9NP64 241 aaKnown RBP17.75■□□□□ 0.43
SPCS3-204ENST00000513139 ZNF70Q9UC06 446 aaPredicted RBP17.75■□□□□ 0.43
SPCS3-204ENST00000513139 PRMT2P55345 433 aa17.74■□□□□ 0.43
SPCS3-204ENST00000513139 MAP3K9P80192 1104 aa17.74■□□□□ 0.43
SPCS3-204ENST00000513139 IFIT5Q13325 482 aaKnown RBP17.74■□□□□ 0.43
SPCS3-204ENST00000513139 VGLL4Q14135 290 aa17.74■□□□□ 0.43
SPCS3-204ENST00000513139 G2E3Q7L622 706 aa17.74■□□□□ 0.43
SPCS3-204ENST00000513139 CSADQ9Y600 493 aa17.74■□□□□ 0.43
SPCS3-204ENST00000513139 TLR2O60603 784 aa17.73■□□□□ 0.43
SPCS3-204ENST00000513139 KIF22Q14807 665 aa17.73■□□□□ 0.43
SPCS3-204ENST00000513139 FAM43AQ8N2R8 423 aa17.73■□□□□ 0.43
SPCS3-204ENST00000513139 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.73■□□□□ 0.43
SPCS3-204ENST00000513139 A0A0C4DFX4 3053 aa17.73■□□□□ 0.43
SPCS3-204ENST00000513139 TNNI2P48788 182 aa17.72■□□□□ 0.43
SPCS3-204ENST00000513139 LACTBP83111 547 aaPredicted RBP17.72■□□□□ 0.43
SPCS3-204ENST00000513139 FOXO4P98177 505 aa17.72■□□□□ 0.43
SPCS3-204ENST00000513139 FLIIQ13045 1269 aa17.72■□□□□ 0.43
SPCS3-204ENST00000513139 TWISTNBQ3B726 338 aaPredicted RBP17.72■□□□□ 0.43
SPCS3-204ENST00000513139 MFSD14BQ5SR56 506 aa17.72■□□□□ 0.43
SPCS3-204ENST00000513139 DNAAF4Q8WXU2 420 aa17.72■□□□□ 0.43
SPCS3-204ENST00000513139 TDRD3Q9H7E2 651 aaKnown RBP17.72■□□□□ 0.43
SPCS3-204ENST00000513139 TTF2Q9UNY4 1162 aaKnown RBP17.72■□□□□ 0.43
SPCS3-204ENST00000513139 COL6A3P12111 3177 aa17.71■□□□□ 0.43
SPCS3-204ENST00000513139 SPDYE5A6NIY4 337 aa17.71■□□□□ 0.43
SPCS3-204ENST00000513139 CETPP11597 493 aa17.71■□□□□ 0.43
SPCS3-204ENST00000513139 DZIP1LQ8IYY4 767 aaKnown RBP17.71■□□□□ 0.43
SPCS3-204ENST00000513139 TDRD7Q8NHU6 1098 aaKnown RBP17.71■□□□□ 0.43
SPCS3-204ENST00000513139 SH3TC2Q8TF17 1288 aa17.71■□□□□ 0.43
SPCS3-204ENST00000513139 JAG2Q9Y219 1238 aa17.71■□□□□ 0.43
SPCS3-204ENST00000513139 FKBP5Q13451 457 aaPredicted RBP17.7■□□□□ 0.42
SPCS3-204ENST00000513139 ERO1BQ86YB8 467 aa17.7■□□□□ 0.42
SPCS3-204ENST00000513139 TSR2Q969E8 191 aaKnown RBP17.7■□□□□ 0.42
SPCS3-204ENST00000513139 TMEM39BQ9GZU3 492 aa17.7■□□□□ 0.42
SPCS3-204ENST00000513139 CHRDL2Q6WN34 429 aa17.69■□□□□ 0.42
SPCS3-204ENST00000513139 LDHAL6AQ6ZMR3 332 aa17.69■□□□□ 0.42
SPCS3-204ENST00000513139 CDAN1Q8IWY9 1227 aa17.69■□□□□ 0.42
SPCS3-204ENST00000513139 NKX2-3Q8TAU0 364 aa17.69■□□□□ 0.42
SPCS3-204ENST00000513139 ARHGAP39Q9C0H5 1083 aa17.69■□□□□ 0.42
SPCS3-204ENST00000513139 TCP10L2B9ZVM9 353 aa17.68■□□□□ 0.42
SPCS3-204ENST00000513139 MGAMO43451 1857 aa17.68■□□□□ 0.42
SPCS3-204ENST00000513139 MYCP01106 439 aaPredicted RBP17.68■□□□□ 0.42
SPCS3-204ENST00000513139 SNAPC2Q13487 334 aa17.68■□□□□ 0.42
SPCS3-204ENST00000513139 UBE4AQ14139 1066 aa17.68■□□□□ 0.42
SPCS3-204ENST00000513139 CCDC57Q2TAC2 916 aa17.68■□□□□ 0.42
SPCS3-204ENST00000513139 CHMP3Q9Y3E7 222 aa17.68■□□□□ 0.42
SPCS3-204ENST00000513139 BTBD19C9JJ37 291 aa17.67■□□□□ 0.42
SPCS3-204ENST00000513139 HIBADHP31937 336 aaKnown RBP17.67■□□□□ 0.42
SPCS3-204ENST00000513139 CRKP46108 304 aa17.67■□□□□ 0.42
SPCS3-204ENST00000513139 HDLBPQ00341 1268 aaKnown RBP17.67■□□□□ 0.42
SPCS3-204ENST00000513139 CCDC27Q2M243 656 aa17.67■□□□□ 0.42
SPCS3-204ENST00000513139 SHISA4Q96DD7 197 aa17.67■□□□□ 0.42
SPCS3-204ENST00000513139 HOOK2Q96ED9 719 aa17.67■□□□□ 0.42
SPCS3-204ENST00000513139 CNNM1Q9NRU3 951 aa17.67■□□□□ 0.42
SPCS3-204ENST00000513139 RBM27Q9P2N5 1060 aaKnown RBP17.67■□□□□ 0.42
SPCS3-204ENST00000513139 SNCAIPQ9Y6H5 919 aa17.67■□□□□ 0.42
SPCS3-204ENST00000513139 CUL9Q8IWT3 2517 aa17.66■□□□□ 0.42
SPCS3-204ENST00000513139 PLIN1O60240 522 aa17.66■□□□□ 0.42
SPCS3-204ENST00000513139 PPIL2Q13356 520 aa17.66■□□□□ 0.42
SPCS3-204ENST00000513139 LMBR1LQ6UX01 489 aa17.66■□□□□ 0.42
SPCS3-204ENST00000513139 DPF3Q92784 378 aa17.66■□□□□ 0.42
SPCS3-204ENST00000513139 FAM84BQ96KN1 310 aaPredicted RBP17.66■□□□□ 0.42
SPCS3-204ENST00000513139 PRKRIP1Q9H875 184 aaPredicted RBP17.66■□□□□ 0.42
SPCS3-204ENST00000513139 AK9Q5TCS8 1911 aa17.66■□□□□ 0.42
SPCS3-204ENST00000513139 LAMA3Q16787 3333 aa17.65■□□□□ 0.42
SPCS3-204ENST00000513139 SPDYE4A6NLX3 237 aa17.65■□□□□ 0.42
SPCS3-204ENST00000513139 IRF6O14896 467 aa17.65■□□□□ 0.42
SPCS3-204ENST00000513139 HOXD10P28358 340 aa17.65■□□□□ 0.42
SPCS3-204ENST00000513139 TAF7LQ5H9L4 462 aa17.65■□□□□ 0.42
SPCS3-204ENST00000513139 FKBP1CQ5VVH2 108 aa17.65■□□□□ 0.42
SPCS3-204ENST00000513139 C17orf99Q6UX52 265 aa17.65■□□□□ 0.42
SPCS3-204ENST00000513139 UBE2Q1Q7Z7E8 422 aa17.65■□□□□ 0.42
SPCS3-204ENST00000513139 FAM83AQ86UY5 434 aa17.65■□□□□ 0.42
SPCS3-204ENST00000513139 ZNF594Q96JF6 807 aaPredicted RBP17.65■□□□□ 0.42
SPCS3-204ENST00000513139 HTATIP2Q9BUP3 242 aa17.65■□□□□ 0.42
SPCS3-204ENST00000513139 PRO3102Q9H379 93 aa17.65■□□□□ 0.42
SPCS3-204ENST00000513139 SRRDQ9UH36 339 aa17.65■□□□□ 0.42
SPCS3-204ENST00000513139 IL16Q14005 1332 aa17.65■□□□□ 0.42
SPCS3-204ENST00000513139 GYG1P46976 350 aa17.64■□□□□ 0.41
SPCS3-204ENST00000513139 GJA8P48165 433 aa17.64■□□□□ 0.41
SPCS3-204ENST00000513139 MTFR1Q15390 333 aa17.64■□□□□ 0.41
SPCS3-204ENST00000513139 WRNIP1Q96S55 665 aa17.64■□□□□ 0.41
SPCS3-204ENST00000513139 MRIQ9BWK5 157 aa17.64■□□□□ 0.41
SPCS3-204ENST00000513139 GJB1P08034 283 aa17.63■□□□□ 0.41
SPCS3-204ENST00000513139 GRK4P32298 578 aa17.63■□□□□ 0.41
SPCS3-204ENST00000513139 PPATQ06203 517 aa17.63■□□□□ 0.41
SPCS3-204ENST00000513139 BEND3Q5T5X7 828 aa17.63■□□□□ 0.41
SPCS3-204ENST00000513139 WWC1Q8IX03 1113 aa17.63■□□□□ 0.41
SPCS3-204ENST00000513139 TBC1D22AQ8WUA7 517 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms