RNA–Protein interactions for RNA: ENST00000512979.1

TRIO-220, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 292 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-220ENST00000512979 SUPT20HQ8NEM7 779 aa12.18□□□□□ -0.46
TRIO-220ENST00000512979 GRAPLQ8TC17 118 aaPredicted RBP12.18□□□□□ -0.46
TRIO-220ENST00000512979 MKRN1Q9UHC7 482 aaKnown RBP12.18□□□□□ -0.46
TRIO-220ENST00000512979 LYPD8Q6UX82 237 aa12.17□□□□□ -0.46
TRIO-220ENST00000512979 DPP8Q6V1X1 898 aaPredicted RBP12.17□□□□□ -0.46
TRIO-220ENST00000512979 MPNDQ8N594 471 aa12.17□□□□□ -0.46
TRIO-220ENST00000512979 FAM89AQ96GI7 184 aa12.17□□□□□ -0.46
TRIO-220ENST00000512979 RTFDC1Q9BY42 306 aaPredicted RBP12.17□□□□□ -0.46
TRIO-220ENST00000512979 VPS33BQ9H267 617 aa12.17□□□□□ -0.46
TRIO-220ENST00000512979 MTMR7Q9Y216 660 aa12.17□□□□□ -0.46
TRIO-220ENST00000512979 ATG7O95352 703 aa12.16□□□□□ -0.46
TRIO-220ENST00000512979 ITGBL1O95965 494 aaPredicted RBP12.16□□□□□ -0.46
TRIO-220ENST00000512979 HSPA1AP0DMV8 641 aaKnown RBP12.16□□□□□ -0.46
TRIO-220ENST00000512979 HSPA1BP0DMV9 641 aaKnown RBP12.16□□□□□ -0.46
TRIO-220ENST00000512979 SCNN1DP51172 638 aa12.16□□□□□ -0.46
TRIO-220ENST00000512979 MAP1SQ66K74 1059 aaPredicted RBP12.16□□□□□ -0.46
TRIO-220ENST00000512979 TMEM88BA6NKF7 163 aa12.15□□□□□ -0.46
TRIO-220ENST00000512979 EPS15P42566 896 aa12.15□□□□□ -0.46
TRIO-220ENST00000512979 NR1H3Q13133 447 aa12.15□□□□□ -0.46
TRIO-220ENST00000512979 CCDC184Q52MB2 194 aa12.15□□□□□ -0.46
TRIO-220ENST00000512979 RNF19BQ6ZMZ0 732 aa12.15□□□□□ -0.46
TRIO-220ENST00000512979 TMC4Q7Z404 712 aa12.15□□□□□ -0.46
TRIO-220ENST00000512979 CNTROBQ8N137 903 aa12.15□□□□□ -0.46
TRIO-220ENST00000512979 C8orf58Q8NAV2 365 aa12.15□□□□□ -0.46
TRIO-220ENST00000512979 OTUD5Q96G74 571 aa12.15□□□□□ -0.46
TRIO-220ENST00000512979 LRCH3Q96II8 777 aa12.15□□□□□ -0.46
TRIO-220ENST00000512979 PHAXQ9H814 394 aaKnown RBP12.15□□□□□ -0.46
TRIO-220ENST00000512979 ZNRF3Q9ULT6 936 aa12.15□□□□□ -0.46
TRIO-220ENST00000512979 LAMB2P55268 1798 aa12.15□□□□□ -0.46
TRIO-220ENST00000512979 IRS4O14654 1257 aaPredicted RBP12.14□□□□□ -0.47
TRIO-220ENST00000512979 CXCL9Q07325 125 aa12.14□□□□□ -0.47
TRIO-220ENST00000512979 KIAA2012Q0VF49 1180 aa12.14□□□□□ -0.47
TRIO-220ENST00000512979 TRIM28Q13263 835 aaKnown RBP12.14□□□□□ -0.47
TRIO-220ENST00000512979 SF3B3Q15393 1217 aaKnown RBP12.14□□□□□ -0.47
TRIO-220ENST00000512979 COL13A1Q5TAT6 717 aaPredicted RBP12.14□□□□□ -0.47
TRIO-220ENST00000512979 BLOC1S3Q6QNY0 202 aa12.14□□□□□ -0.47
TRIO-220ENST00000512979 CELF1Q92879 486 aaKnown RBP12.14□□□□□ -0.47
TRIO-220ENST00000512979 ADAMTSL1Q8N6G6 1762 aa12.14□□□□□ -0.47
TRIO-220ENST00000512979 CNTNAP1P78357 1384 aa12.14□□□□□ -0.47
TRIO-220ENST00000512979 LTBP1Q14766 1721 aa12.14□□□□□ -0.47
TRIO-220ENST00000512979 ATP9BO43861 1147 aa12.13□□□□□ -0.47
TRIO-220ENST00000512979 FBXO45P0C2W1 286 aa12.13□□□□□ -0.47
TRIO-220ENST00000512979 CCDC30Q5VVM6 783 aa12.13□□□□□ -0.47
TRIO-220ENST00000512979 ZNF687Q8N1G0 1237 aa12.13□□□□□ -0.47
TRIO-220ENST00000512979 MRPL50Q8N5N7 158 aaKnown RBP12.13□□□□□ -0.47
TRIO-220ENST00000512979 MYD88Q99836 296 aa12.13□□□□□ -0.47
TRIO-220ENST00000512979 RAD17O75943 681 aa12.12□□□□□ -0.47
TRIO-220ENST00000512979 CIAPIN1Q6FI81 312 aa12.12□□□□□ -0.47
TRIO-220ENST00000512979 USP50Q70EL3 339 aaPredicted RBP12.12□□□□□ -0.47
TRIO-220ENST00000512979 TSPYL6Q8N831 410 aa12.12□□□□□ -0.47
TRIO-220ENST00000512979 ZBTB38Q8NAP3 1195 aaPredicted RBP12.12□□□□□ -0.47
TRIO-220ENST00000512979 TSR2Q969E8 191 aaKnown RBP12.12□□□□□ -0.47
TRIO-220ENST00000512979 USB1Q9BQ65 265 aaKnown RBP12.12□□□□□ -0.47
TRIO-220ENST00000512979 CHMP4AQ9BY43 222 aa12.12□□□□□ -0.47
TRIO-220ENST00000512979 VRTNQ9H8Y1 702 aa12.12□□□□□ -0.47
TRIO-220ENST00000512979 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.12□□□□□ -0.47
TRIO-220ENST00000512979 GPRC5DQ9NZD1 345 aa12.12□□□□□ -0.47
TRIO-220ENST00000512979 NSFL1CQ9UNZ2 370 aaKnown RBP12.12□□□□□ -0.47
TRIO-220ENST00000512979 DDX60Q8IY21 1712 aaKnown RBP12.11□□□□□ -0.47
TRIO-220ENST00000512979 DDX58O95786 925 aaKnown RBP12.11□□□□□ -0.47
TRIO-220ENST00000512979 GMPSP49915 693 aaPredicted RBP12.11□□□□□ -0.47
TRIO-220ENST00000512979 EMP3P54852 163 aa12.11□□□□□ -0.47
TRIO-220ENST00000512979 TNIP1Q15025 636 aa12.11□□□□□ -0.47
TRIO-220ENST00000512979 CCDC191Q8NCU4 936 aa12.11□□□□□ -0.47
TRIO-220ENST00000512979 PRR14Q9BWN1 585 aa12.11□□□□□ -0.47
TRIO-220ENST00000512979 BCL2L13Q9BXK5 485 aa12.11□□□□□ -0.47
TRIO-220ENST00000512979 ADARB2Q9NS39 739 aaKnown RBP12.11□□□□□ -0.47
TRIO-220ENST00000512979 TAF1P21675 1872 aa12.1□□□□□ -0.47
TRIO-220ENST00000512979 YDJCA8MPS7 323 aa12.1□□□□□ -0.47
TRIO-220ENST00000512979 ZBBXA8MT70 800 aa12.1□□□□□ -0.47
TRIO-220ENST00000512979 PCCAP05165 728 aaPredicted RBP12.1□□□□□ -0.47
TRIO-220ENST00000512979 HSP90B1P14625 803 aaKnown RBP12.1□□□□□ -0.47
TRIO-220ENST00000512979 VEGFBP49765 207 aa12.1□□□□□ -0.47
TRIO-220ENST00000512979 RPS8P62241 208 aaKnown RBP12.1□□□□□ -0.47
TRIO-220ENST00000512979 GPSM2P81274 684 aa12.1□□□□□ -0.47
TRIO-220ENST00000512979 CCDC27Q2M243 656 aa12.1□□□□□ -0.47
TRIO-220ENST00000512979 JARID2Q92833 1246 aaPredicted RBP12.1□□□□□ -0.47
TRIO-220ENST00000512979 METTL22Q9BUU2 404 aaPredicted RBP12.1□□□□□ -0.47
TRIO-220ENST00000512979 MRS2Q9HD23 443 aa12.1□□□□□ -0.47
TRIO-220ENST00000512979 CWC25Q9NXE8 425 aaPredicted RBP12.1□□□□□ -0.47
TRIO-220ENST00000512979 FKBPLQ9UIM3 349 aa12.1□□□□□ -0.47
TRIO-220ENST00000512979 ABT1Q9ULW3 272 aaKnown RBP12.1□□□□□ -0.47
TRIO-220ENST00000512979 DUOX1Q9NRD9 1551 aa12.09□□□□□ -0.47
TRIO-220ENST00000512979 TK2O00142 265 aa12.09□□□□□ -0.47
TRIO-220ENST00000512979 PIK3CDO00329 1044 aa12.09□□□□□ -0.47
TRIO-220ENST00000512979 FMR1Q06787 632 aaKnown RBP eCLIP12.09□□□□□ -0.47
TRIO-220ENST00000512979 DEFB115Q30KQ5 88 aa12.09□□□□□ -0.47
TRIO-220ENST00000512979 CCDC152Q4G0S7 254 aa12.09□□□□□ -0.47
TRIO-220ENST00000512979 BRICD5Q6PL45 260 aa12.09□□□□□ -0.47
TRIO-220ENST00000512979 TNS4Q8IZW8 715 aa12.09□□□□□ -0.47
TRIO-220ENST00000512979 MARVELD3Q96A59 401 aa12.09□□□□□ -0.47
TRIO-220ENST00000512979 CCDC85AQ96PX6 553 aaPredicted RBP12.09□□□□□ -0.47
TRIO-220ENST00000512979 STK31Q9BXU1 1019 aa12.09□□□□□ -0.47
TRIO-220ENST00000512979 DBNDD1Q9H9R9 158 aa12.09□□□□□ -0.47
TRIO-220ENST00000512979 SEC31BQ9NQW1 1179 aa12.09□□□□□ -0.47
TRIO-220ENST00000512979 POLLQ9UGP5 575 aa12.09□□□□□ -0.47
TRIO-220ENST00000512979 MAP3K2Q9Y2U5 619 aa12.09□□□□□ -0.47
TRIO-220ENST00000512979 COL4A1P02462 1669 aa12.09□□□□□ -0.47
TRIO-220ENST00000512979 CDHR2Q9BYE9 1310 aa12.09□□□□□ -0.47
TRIO-220ENST00000512979 LRRC37AA6NMS7 1700 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms